RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 MYO5CQ9NQX4 1742 aa15.6■□□□□ 0.09
C4orf3-201ENST00000399075 ARHGAP5Q13017 1502 aa15.58■□□□□ 0.09
C4orf3-201ENST00000399075 IQGAP3Q86VI3 1631 aa15.57■□□□□ 0.08
C4orf3-201ENST00000399075 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
C4orf3-201ENST00000399075 FAM9BQ8IZU0 186 aa15.57■□□□□ 0.08
C4orf3-201ENST00000399075 E9PCH4 1651 aa15.56■□□□□ 0.08
C4orf3-201ENST00000399075 CARD11Q9BXL7 1154 aa15.55■□□□□ 0.08
C4orf3-201ENST00000399075 TRPM1Q7Z4N2 1603 aa15.55■□□□□ 0.08
C4orf3-201ENST00000399075 LAMC1P11047 1609 aa15.55■□□□□ 0.08
C4orf3-201ENST00000399075 KTN1Q86UP2 1357 aaKnown RBP15.54■□□□□ 0.08
C4orf3-201ENST00000399075 MAGI2Q86UL8 1455 aa15.54■□□□□ 0.08
C4orf3-201ENST00000399075 CCDC144AA2RUR9 1427 aa15.53■□□□□ 0.08
C4orf3-201ENST00000399075 DUOX2Q9NRD8 1548 aa15.53■□□□□ 0.08
C4orf3-201ENST00000399075 PRAG1Q86YV5 1406 aa15.53■□□□□ 0.08
C4orf3-201ENST00000399075 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.07
C4orf3-201ENST00000399075 ATP10AO60312 1499 aa15.52■□□□□ 0.07
C4orf3-201ENST00000399075 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
C4orf3-201ENST00000399075 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
C4orf3-201ENST00000399075 PLA2R1Q13018 1463 aa15.51■□□□□ 0.07
C4orf3-201ENST00000399075 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
C4orf3-201ENST00000399075 GPRASP1Q5JY77 1395 aa15.51■□□□□ 0.07
C4orf3-201ENST00000399075 DCAF11Q8TEB1 546 aa15.5■□□□□ 0.07
C4orf3-201ENST00000399075 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
C4orf3-201ENST00000399075 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
C4orf3-201ENST00000399075 EIF2AK4Q9P2K8 1649 aaKnown RBP15.49■□□□□ 0.07
C4orf3-201ENST00000399075 ZCCHC11Q5TAX3 1644 aaKnown RBP15.49■□□□□ 0.07
C4orf3-201ENST00000399075 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
C4orf3-201ENST00000399075 PLCH2O75038 1416 aa15.48■□□□□ 0.07
C4orf3-201ENST00000399075 ST20-MTHFSA0A0A6YYL1 179 aa15.48■□□□□ 0.07
C4orf3-201ENST00000399075 A2MP01023 1474 aa15.47■□□□□ 0.07
C4orf3-201ENST00000399075 ABCC1P33527 1531 aa15.47■□□□□ 0.07
C4orf3-201ENST00000399075 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
C4orf3-201ENST00000399075 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
C4orf3-201ENST00000399075 ARAP3Q8WWN8 1544 aa15.46■□□□□ 0.07
C4orf3-201ENST00000399075 BRD4O60885 1362 aaPredicted RBP15.46■□□□□ 0.06
C4orf3-201ENST00000399075 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
C4orf3-201ENST00000399075 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
C4orf3-201ENST00000399075 RALBP1Q15311 655 aa15.45■□□□□ 0.06
C4orf3-201ENST00000399075 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
C4orf3-201ENST00000399075 LRPPRCP42704 1394 aaKnown RBP15.44■□□□□ 0.06
C4orf3-201ENST00000399075 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
C4orf3-201ENST00000399075 COL17A1Q9UMD9 1497 aaPredicted RBP15.42■□□□□ 0.06
C4orf3-201ENST00000399075 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
C4orf3-201ENST00000399075 NUDCQ9Y266 331 aa15.42■□□□□ 0.06
C4orf3-201ENST00000399075 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
C4orf3-201ENST00000399075 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
C4orf3-201ENST00000399075 TMC1Q8TDI8 760 aa15.41■□□□□ 0.06
C4orf3-201ENST00000399075 RTEL1-TNFRSF6BF6WH68 1400 aa15.4■□□□□ 0.06
C4orf3-201ENST00000399075 EIF5BO60841 1220 aaKnown RBP15.4■□□□□ 0.06
C4orf3-201ENST00000399075 PARD3Q8TEW0 1356 aa15.39■□□□□ 0.05
C4orf3-201ENST00000399075 WASHC2CQ9Y4E1 1318 aa15.38■□□□□ 0.05
C4orf3-201ENST00000399075 DEPDC5O75140 1603 aa15.37■□□□□ 0.05
C4orf3-201ENST00000399075 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
C4orf3-201ENST00000399075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
C4orf3-201ENST00000399075 ZFYVE16Q7Z3T8 1539 aa15.37■□□□□ 0.05
C4orf3-201ENST00000399075 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
C4orf3-201ENST00000399075 TRPM2O94759 1503 aa15.36■□□□□ 0.05
C4orf3-201ENST00000399075 ZMYM4Q5VZL5 1548 aa15.36■□□□□ 0.05
C4orf3-201ENST00000399075 FANCIQ9NVI1 1328 aa15.36■□□□□ 0.05
C4orf3-201ENST00000399075 CCDC136Q96JN2 1154 aa15.36■□□□□ 0.05
C4orf3-201ENST00000399075 INSRP06213 1382 aa15.36■□□□□ 0.05
C4orf3-201ENST00000399075 NBPF1Q3BBV0 1214 aa15.35■□□□□ 0.05
C4orf3-201ENST00000399075 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
C4orf3-201ENST00000399075 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
C4orf3-201ENST00000399075 TESK2Q96S53 571 aa15.35■□□□□ 0.05
C4orf3-201ENST00000399075 MADDQ8WXG6 1647 aa15.34■□□□□ 0.05
C4orf3-201ENST00000399075 CEP152O94986 1710 aa15.34■□□□□ 0.05
C4orf3-201ENST00000399075 PER1O15534 1290 aaPredicted RBP15.33■□□□□ 0.05
C4orf3-201ENST00000399075 SPHKAPQ2M3C7 1700 aa15.33■□□□□ 0.04
C4orf3-201ENST00000399075 ABCA9Q8IUA7 1624 aa15.33■□□□□ 0.04
C4orf3-201ENST00000399075 PTPRTO14522 1441 aa15.32■□□□□ 0.04
C4orf3-201ENST00000399075 TET3O43151 1660 aa15.32■□□□□ 0.04
C4orf3-201ENST00000399075 IQGAP1P46940 1657 aa15.32■□□□□ 0.04
C4orf3-201ENST00000399075 CNGB1Q14028 1251 aaPredicted RBP15.32■□□□□ 0.04
C4orf3-201ENST00000399075 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
C4orf3-201ENST00000399075 INO80Q9ULG1 1556 aaPredicted RBP15.32■□□□□ 0.04
C4orf3-201ENST00000399075 DISP3Q9P2K9 1392 aa15.32■□□□□ 0.04
C4orf3-201ENST00000399075 NEURL4Q96JN8 1562 aa15.32■□□□□ 0.04
C4orf3-201ENST00000399075 VWDEQ8N2E2 1590 aa15.31■□□□□ 0.04
C4orf3-201ENST00000399075 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
C4orf3-201ENST00000399075 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
C4orf3-201ENST00000399075 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
C4orf3-201ENST00000399075 TMF1P82094 1093 aa15.29■□□□□ 0.04
C4orf3-201ENST00000399075 ATP7AQ04656 1500 aa15.29■□□□□ 0.04
C4orf3-201ENST00000399075 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
C4orf3-201ENST00000399075 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
C4orf3-201ENST00000399075 PDE3BQ13370 1112 aa15.27■□□□□ 0.04
C4orf3-201ENST00000399075 KIAA1210Q9ULL0 1709 aa15.27■□□□□ 0.04
C4orf3-201ENST00000399075 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
C4orf3-201ENST00000399075 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
C4orf3-201ENST00000399075 FANCAO15360 1455 aa15.25■□□□□ 0.03
C4orf3-201ENST00000399075 SYNMO15061 1565 aa15.24■□□□□ 0.03
C4orf3-201ENST00000399075 SCAF11Q99590 1463 aaKnown RBP15.24■□□□□ 0.03
C4orf3-201ENST00000399075 KANK1Q14678 1352 aa15.24■□□□□ 0.03
C4orf3-201ENST00000399075 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
C4orf3-201ENST00000399075 PANK3Q9H999 370 aa15.23■□□□□ 0.03
C4orf3-201ENST00000399075 MROH1Q8NDA8 1641 aa15.22■□□□□ 0.03
C4orf3-201ENST00000399075 MSH5O43196 834 aa15.21■□□□□ 0.03
C4orf3-201ENST00000399075 ADGRL1O94910 1474 aa15.2■□□□□ 0.02
C4orf3-201ENST00000399075 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms