RNA–Protein interactions for RNA: ENST00000398671.2

RC3H2-204, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5

Gene RC3H2, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-204ENST00000398671 EVI5O60447 810 aa11.42□□□□□ -0.58
RC3H2-204ENST00000398671 COL9A1P20849 921 aa11.42□□□□□ -0.58
RC3H2-204ENST00000398671 ZNF787Q6DD87 383 aa11.4□□□□□ -0.58
RC3H2-204ENST00000398671 ZNF775Q96BV0 537 aaPredicted RBP11.4□□□□□ -0.58
RC3H2-204ENST00000398671 PRKD2Q9BZL6 878 aa11.39□□□□□ -0.59
RC3H2-204ENST00000398671 KIAA1468Q9P260 1216 aa11.35□□□□□ -0.59
RC3H2-204ENST00000398671 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
RC3H2-204ENST00000398671 TSR3Q9UJK0 312 aaKnown RBP11.34□□□□□ -0.59
RC3H2-204ENST00000398671 PCDHGA10Q9Y5H3 936 aa11.34□□□□□ -0.59
RC3H2-204ENST00000398671 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
RC3H2-204ENST00000398671 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
RC3H2-204ENST00000398671 ONECUT3O60422 494 aaPredicted RBP11.3□□□□□ -0.6
RC3H2-204ENST00000398671 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
RC3H2-204ENST00000398671 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
RC3H2-204ENST00000398671 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
RC3H2-204ENST00000398671 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
RC3H2-204ENST00000398671 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
RC3H2-204ENST00000398671 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
RC3H2-204ENST00000398671 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
RC3H2-204ENST00000398671 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
RC3H2-204ENST00000398671 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
RC3H2-204ENST00000398671 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
RC3H2-204ENST00000398671 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
RC3H2-204ENST00000398671 PPP1R18Q6NYC8 613 aa11.23□□□□□ -0.61
RC3H2-204ENST00000398671 PHF14O94880 888 aa11.22□□□□□ -0.61
RC3H2-204ENST00000398671 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
RC3H2-204ENST00000398671 PDE4AP27815 886 aa11.18□□□□□ -0.62
RC3H2-204ENST00000398671 MTRQ99707 1265 aa11.18□□□□□ -0.62
RC3H2-204ENST00000398671 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
RC3H2-204ENST00000398671 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
RC3H2-204ENST00000398671 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
RC3H2-204ENST00000398671 C6orf132Q5T0Z8 1188 aa11.16□□□□□ -0.62
RC3H2-204ENST00000398671 BBXQ8WY36 941 aaPredicted RBP11.16□□□□□ -0.62
RC3H2-204ENST00000398671 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
RC3H2-204ENST00000398671 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
RC3H2-204ENST00000398671 PPP4CP60510 307 aa11.14□□□□□ -0.63
RC3H2-204ENST00000398671 DDX27Q96GQ7 796 aaKnown RBP11.14□□□□□ -0.63
RC3H2-204ENST00000398671 MFSD10Q14728 455 aa11.13□□□□□ -0.63
RC3H2-204ENST00000398671 LCE2AQ5TA79 106 aaPredicted RBP11.11□□□□□ -0.63
RC3H2-204ENST00000398671 ZNF516Q92618 1163 aa11.1□□□□□ -0.63
RC3H2-204ENST00000398671 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
RC3H2-204ENST00000398671 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
RC3H2-204ENST00000398671 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
RC3H2-204ENST00000398671 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
RC3H2-204ENST00000398671 EPAS1Q99814 870 aa11.09□□□□□ -0.63
RC3H2-204ENST00000398671 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
RC3H2-204ENST00000398671 POTECB2RU33 542 aa11.08□□□□□ -0.64
RC3H2-204ENST00000398671 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
RC3H2-204ENST00000398671 MYT1Q01538 1121 aa11.06□□□□□ -0.64
RC3H2-204ENST00000398671 SAMD7Q7Z3H4 446 aa11.06□□□□□ -0.64
RC3H2-204ENST00000398671 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
RC3H2-204ENST00000398671 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
RC3H2-204ENST00000398671 TREML4Q6UXN2 200 aa11.03□□□□□ -0.64
RC3H2-204ENST00000398671 PACS2Q86VP3 889 aa11.02□□□□□ -0.65
RC3H2-204ENST00000398671 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.65
RC3H2-204ENST00000398671 PKDCCQ504Y2 493 aa11.01□□□□□ -0.65
RC3H2-204ENST00000398671 RBM33Q96EV2 1170 aaKnown RBP11.01□□□□□ -0.65
RC3H2-204ENST00000398671 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
RC3H2-204ENST00000398671 DGAT1O75907 488 aa10.99□□□□□ -0.65
RC3H2-204ENST00000398671 GGCXP38435 758 aa10.99□□□□□ -0.65
RC3H2-204ENST00000398671 APLP1P51693 650 aa10.99□□□□□ -0.65
RC3H2-204ENST00000398671 CFAP44Q96MT7 982 aa10.99□□□□□ -0.65
RC3H2-204ENST00000398671 SMAPO00193 183 aa10.98□□□□□ -0.65
RC3H2-204ENST00000398671 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
RC3H2-204ENST00000398671 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
RC3H2-204ENST00000398671 EMID1Q96A84 441 aaPredicted RBP10.95□□□□□ -0.66
RC3H2-204ENST00000398671 PRR20EP86478 221 aa10.94□□□□□ -0.66
RC3H2-204ENST00000398671 PRR20CP86479 221 aa10.94□□□□□ -0.66
RC3H2-204ENST00000398671 PRR20DP86480 221 aa10.94□□□□□ -0.66
RC3H2-204ENST00000398671 PRR20BP86481 221 aa10.94□□□□□ -0.66
RC3H2-204ENST00000398671 PRR20AP86496 221 aa10.94□□□□□ -0.66
RC3H2-204ENST00000398671 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
RC3H2-204ENST00000398671 FAM198AQ9UFP1 575 aa10.94□□□□□ -0.66
RC3H2-204ENST00000398671 C3orf80F5H4A9 247 aa10.93□□□□□ -0.66
RC3H2-204ENST00000398671 DPYSL4O14531 572 aa10.9□□□□□ -0.66
RC3H2-204ENST00000398671 SLC19A1P41440 591 aa10.9□□□□□ -0.66
RC3H2-204ENST00000398671 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
RC3H2-204ENST00000398671 COPS2P61201 443 aa10.9□□□□□ -0.66
RC3H2-204ENST00000398671 DDX12PQ92771 950 aa10.9□□□□□ -0.66
RC3H2-204ENST00000398671 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
RC3H2-204ENST00000398671 STK17AQ9UEE5 414 aa10.9□□□□□ -0.66
RC3H2-204ENST00000398671 RNF40O75150 1001 aa10.89□□□□□ -0.67
RC3H2-204ENST00000398671 LOC100996750A0A140TA64 210 aa10.88□□□□□ -0.67
RC3H2-204ENST00000398671 MAP3K7O43318 606 aa10.88□□□□□ -0.67
RC3H2-204ENST00000398671 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
RC3H2-204ENST00000398671 CAMK2BQ13554 666 aa10.88□□□□□ -0.67
RC3H2-204ENST00000398671 SPRYD7Q5W111 196 aa10.88□□□□□ -0.67
RC3H2-204ENST00000398671 KRTAP4-6Q9BYQ5 205 aa10.88□□□□□ -0.67
RC3H2-204ENST00000398671 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
RC3H2-204ENST00000398671 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
RC3H2-204ENST00000398671 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
RC3H2-204ENST00000398671 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
RC3H2-204ENST00000398671 NBR1Q14596 966 aa10.87□□□□□ -0.67
RC3H2-204ENST00000398671 PRSS12P56730 875 aa10.86□□□□□ -0.67
RC3H2-204ENST00000398671 TATDN2Q93075 761 aa10.86□□□□□ -0.67
RC3H2-204ENST00000398671 ZPR1O75312 459 aa10.85□□□□□ -0.67
RC3H2-204ENST00000398671 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
RC3H2-204ENST00000398671 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
RC3H2-204ENST00000398671 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
RC3H2-204ENST00000398671 WFS1O76024 890 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms