RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 APPP05067 770 aa14.23□□□□□ -0.13
SLC38A1-201ENST00000398637 NAP1L5Q96NT1 182 aaPredicted RBP14.22□□□□□ -0.13
SLC38A1-201ENST00000398637 PPP4R2Q9NY27 417 aa14.22□□□□□ -0.13
SLC38A1-201ENST00000398637 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
SLC38A1-201ENST00000398637 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
SLC38A1-201ENST00000398637 FYB1O15117 783 aa14.21□□□□□ -0.14
SLC38A1-201ENST00000398637 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.14
SLC38A1-201ENST00000398637 SF3A1Q15459 793 aaKnown RBP14.2□□□□□ -0.14
SLC38A1-201ENST00000398637 NOL8Q76FK4 1167 aaKnown RBP14.2□□□□□ -0.14
SLC38A1-201ENST00000398637 TPM2P07951 284 aa14.19□□□□□ -0.14
SLC38A1-201ENST00000398637 TPM3P06753 285 aa14.19□□□□□ -0.14
SLC38A1-201ENST00000398637 TEFQ10587 303 aa14.19□□□□□ -0.14
SLC38A1-201ENST00000398637 TSR1Q2NL82 804 aaKnown RBP14.19□□□□□ -0.14
SLC38A1-201ENST00000398637 ODF2Q5BJF6 829 aa14.19□□□□□ -0.14
SLC38A1-201ENST00000398637 EFCAB2Q5VUJ9 269 aa14.18□□□□□ -0.14
SLC38A1-201ENST00000398637 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
SLC38A1-201ENST00000398637 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
SLC38A1-201ENST00000398637 MTMR7Q9Y216 660 aa14.17□□□□□ -0.14
SLC38A1-201ENST00000398637 CCDC27Q2M243 656 aa14.17□□□□□ -0.14
SLC38A1-201ENST00000398637 TMEM87AQ8NBN3 555 aa14.16□□□□□ -0.14
SLC38A1-201ENST00000398637 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
SLC38A1-201ENST00000398637 GOLGA6L1Q8N7Z2 621 aa14.16□□□□□ -0.14
SLC38A1-201ENST00000398637 PCMTD1Q96MG8 357 aaPredicted RBP14.16□□□□□ -0.14
SLC38A1-201ENST00000398637 MSNP26038 577 aaKnown RBP14.16□□□□□ -0.14
SLC38A1-201ENST00000398637 HMMRO75330 724 aa14.16□□□□□ -0.14
SLC38A1-201ENST00000398637 FAM177BA6PVY3 158 aa14.15□□□□□ -0.14
SLC38A1-201ENST00000398637 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
SLC38A1-201ENST00000398637 CT47A1Q5JQC4 288 aaPredicted RBP14.14□□□□□ -0.15
SLC38A1-201ENST00000398637 ZFYVE27Q5T4F4 411 aa14.14□□□□□ -0.15
SLC38A1-201ENST00000398637 H3BQV1 296 aa14.13□□□□□ -0.15
SLC38A1-201ENST00000398637 IFFO2Q5TF58 517 aa14.13□□□□□ -0.15
SLC38A1-201ENST00000398637 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.13□□□□□ -0.15
SLC38A1-201ENST00000398637 STRN4Q9NRL3 753 aa14.13□□□□□ -0.15
SLC38A1-201ENST00000398637 WDHD1O75717 1129 aaPredicted RBP14.12□□□□□ -0.15
SLC38A1-201ENST00000398637 LRRFIP1Q32MZ4 808 aaKnown RBP14.12□□□□□ -0.15
SLC38A1-201ENST00000398637 KAT6BQ8WYB5 2073 aa14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 PATL2C9JE40 543 aaKnown RBP14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 RBM5P52756 815 aaKnown RBP eCLIP14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 FAM69CQ0P6D2 419 aa14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 C9orf78Q9NZ63 289 aaPredicted RBP14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 PLIN1O60240 522 aa14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 CCDC97Q96F63 343 aaPredicted RBP14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 NECTIN2Q92692 538 aa14.11□□□□□ -0.15
SLC38A1-201ENST00000398637 KIF3AQ9Y496 699 aa14.1□□□□□ -0.15
SLC38A1-201ENST00000398637 KIF16BQ96L93 1317 aa14.1□□□□□ -0.15
SLC38A1-201ENST00000398637 SMC4Q9NTJ3 1288 aa14.1□□□□□ -0.15
SLC38A1-201ENST00000398637 SUPT16HQ9Y5B9 1047 aaKnown RBP14.1□□□□□ -0.15
SLC38A1-201ENST00000398637 ERICH2A1L162 156 aa14.1□□□□□ -0.15
SLC38A1-201ENST00000398637 FAM184AQ8NB25 1140 aa14.09□□□□□ -0.15
SLC38A1-201ENST00000398637 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
SLC38A1-201ENST00000398637 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
SLC38A1-201ENST00000398637 LMOD3Q0VAK6 560 aa14.09□□□□□ -0.15
SLC38A1-201ENST00000398637 TRIM29Q14134 588 aa14.09□□□□□ -0.15
SLC38A1-201ENST00000398637 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
SLC38A1-201ENST00000398637 COG3Q96JB2 828 aa14.09□□□□□ -0.15
SLC38A1-201ENST00000398637 GRM1Q13255 1194 aa14.08□□□□□ -0.16
SLC38A1-201ENST00000398637 NFXL1Q6ZNB6 911 aa14.08□□□□□ -0.16
SLC38A1-201ENST00000398637 CHMP4BP1P59074 171 aa14.08□□□□□ -0.16
SLC38A1-201ENST00000398637 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
SLC38A1-201ENST00000398637 ATP2B2Q01814 1243 aa14.07□□□□□ -0.16
SLC38A1-201ENST00000398637 MCTP1Q6DN14 999 aa14.07□□□□□ -0.16
SLC38A1-201ENST00000398637 RILPL2Q969X0 211 aa14.07□□□□□ -0.16
SLC38A1-201ENST00000398637 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
SLC38A1-201ENST00000398637 RAPGEF4Q8WZA2 1011 aa14.07□□□□□ -0.16
SLC38A1-201ENST00000398637 TRAK1Q9UPV9 953 aa14.07□□□□□ -0.16
SLC38A1-201ENST00000398637 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
SLC38A1-201ENST00000398637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.05□□□□□ -0.16
SLC38A1-201ENST00000398637 C16orf71Q8IYS4 520 aaPredicted RBP14.05□□□□□ -0.16
SLC38A1-201ENST00000398637 PKD2Q13563 968 aa14.05□□□□□ -0.16
SLC38A1-201ENST00000398637 CSPP1Q1MSJ5 1256 aa14.05□□□□□ -0.16
SLC38A1-201ENST00000398637 SYAP1Q96A49 352 aaPredicted RBP14.04□□□□□ -0.16
SLC38A1-201ENST00000398637 TRDNQ13061 729 aa14.04□□□□□ -0.16
SLC38A1-201ENST00000398637 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
SLC38A1-201ENST00000398637 TPM1P09493 284 aa14.04□□□□□ -0.16
SLC38A1-201ENST00000398637 PLCD3Q8N3E9 789 aa14.04□□□□□ -0.16
SLC38A1-201ENST00000398637 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
SLC38A1-201ENST00000398637 MPHOSPH10O00566 681 aaKnown RBP14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 EPS15P42566 896 aa14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 CPLX2Q6PUV4 134 aaKnown RBP14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.166e-7■■■■□ 23.4
SLC38A1-201ENST00000398637 PDE3BQ13370 1112 aa14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 ARID3AQ99856 593 aa14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
SLC38A1-201ENST00000398637 TCERG1O14776 1098 aaKnown RBP14.01□□□□□ -0.17
SLC38A1-201ENST00000398637 CCAR2Q8N163 923 aaKnown RBP14.01□□□□□ -0.17
SLC38A1-201ENST00000398637 DDX58O95786 925 aaKnown RBP14.01□□□□□ -0.17
SLC38A1-201ENST00000398637 KTN1Q86UP2 1357 aaKnown RBP14.01□□□□□ -0.17
SLC38A1-201ENST00000398637 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
SLC38A1-201ENST00000398637 RWDD1Q9H446 243 aaPredicted RBP14□□□□□ -0.17
SLC38A1-201ENST00000398637 CPLX1O14810 134 aa13.99□□□□□ -0.17
SLC38A1-201ENST00000398637 AIMP1Q12904 312 aaKnown RBP13.99□□□□□ -0.17
SLC38A1-201ENST00000398637 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
SLC38A1-201ENST00000398637 KIF6Q6ZMV9 814 aa13.99□□□□□ -0.17
SLC38A1-201ENST00000398637 CCDC146Q8IYE0 955 aa13.99□□□□□ -0.17
SLC38A1-201ENST00000398637 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
SLC38A1-201ENST00000398637 CA8P35219 290 aa13.98□□□□□ -0.17
SLC38A1-201ENST00000398637 NAP1L1P55209 391 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms