RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 NUP155O75694 1391 aa13.74□□□□□ -0.21
PCDHGA10-201ENST00000398610 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA10-201ENST00000398610 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
PCDHGA10-201ENST00000398610 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
PCDHGA10-201ENST00000398610 SYNJ2O15056 1496 aa13.73□□□□□ -0.21
PCDHGA10-201ENST00000398610 NPHP1O15259 732 aa13.73□□□□□ -0.21
PCDHGA10-201ENST00000398610 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
PCDHGA10-201ENST00000398610 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA10-201ENST00000398610 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
PCDHGA10-201ENST00000398610 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
PCDHGA10-201ENST00000398610 TMF1P82094 1093 aa13.71□□□□□ -0.21
PCDHGA10-201ENST00000398610 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
PCDHGA10-201ENST00000398610 AKNAQ7Z591 1439 aa13.7□□□□□ -0.22
PCDHGA10-201ENST00000398610 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
PCDHGA10-201ENST00000398610 ARHGEF11O15085 1522 aa13.7□□□□□ -0.22
PCDHGA10-201ENST00000398610 PTPRGP23470 1445 aa13.7□□□□□ -0.22
PCDHGA10-201ENST00000398610 DDRGK1Q96HY6 314 aa13.69□□□□□ -0.22
PCDHGA10-201ENST00000398610 CAMSAP2Q08AD1 1489 aa13.69□□□□□ -0.22
PCDHGA10-201ENST00000398610 RBM19Q9Y4C8 960 aaKnown RBP13.69□□□□□ -0.22
PCDHGA10-201ENST00000398610 ANKRD30BQ9BXX2 1392 aa13.68□□□□□ -0.22
PCDHGA10-201ENST00000398610 ERICH6BQ5W0A0 696 aa13.68□□□□□ -0.22
PCDHGA10-201ENST00000398610 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
PCDHGA10-201ENST00000398610 KDM6BO15054 1643 aa13.68□□□□□ -0.22
PCDHGA10-201ENST00000398610 ANKRD50Q9ULJ7 1429 aa13.67□□□□□ -0.22
PCDHGA10-201ENST00000398610 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
PCDHGA10-201ENST00000398610 ZNF330Q9Y3S2 320 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA10-201ENST00000398610 C11orf95C9JLR9 678 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA10-201ENST00000398610 KANK1Q14678 1352 aa13.65□□□□□ -0.22
PCDHGA10-201ENST00000398610 APBB1O00213 710 aa13.65□□□□□ -0.22
PCDHGA10-201ENST00000398610 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA10-201ENST00000398610 GPATCH8Q9UKJ3 1502 aaKnown RBP13.65□□□□□ -0.22
PCDHGA10-201ENST00000398610 KIF7Q2M1P5 1343 aa13.64□□□□□ -0.23
PCDHGA10-201ENST00000398610 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
PCDHGA10-201ENST00000398610 NCOA1Q15788 1441 aa13.64□□□□□ -0.23
PCDHGA10-201ENST00000398610 GCC2Q8IWJ2 1684 aa13.64□□□□□ -0.23
PCDHGA10-201ENST00000398610 BECN1Q14457 450 aa13.63□□□□□ -0.23
PCDHGA10-201ENST00000398610 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
PCDHGA10-201ENST00000398610 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 RPRD2Q5VT52 1461 aaKnown RBP13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 KIF15Q9NS87 1388 aa13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 USP47Q96K76 1375 aa13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 NCLP19338 710 aaKnown RBP13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 C9orf84Q5VXU9 1444 aa13.62□□□□□ -0.23
PCDHGA10-201ENST00000398610 KIAA1107Q9UPP5 1409 aa13.61□□□□□ -0.23
PCDHGA10-201ENST00000398610 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
PCDHGA10-201ENST00000398610 OS9Q13438 667 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA10-201ENST00000398610 TRAK1Q9UPV9 953 aa13.61□□□□□ -0.23
PCDHGA10-201ENST00000398610 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
PCDHGA10-201ENST00000398610 CSB-PGBD3P0DP91 1061 aa13.6□□□□□ -0.23
PCDHGA10-201ENST00000398610 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
PCDHGA10-201ENST00000398610 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
PCDHGA10-201ENST00000398610 LTV1Q96GA3 475 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA10-201ENST00000398610 TRIM44Q96DX7 344 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA10-201ENST00000398610 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA10-201ENST00000398610 KIF14Q15058 1648 aa13.58□□□□□ -0.24
PCDHGA10-201ENST00000398610 DENND4BO75064 1496 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA10-201ENST00000398610 ATP10BO94823 1461 aa13.57□□□□□ -0.24
PCDHGA10-201ENST00000398610 NUP160Q12769 1436 aa13.57□□□□□ -0.24
PCDHGA10-201ENST00000398610 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 NOP58Q9Y2X3 529 aaKnown RBP13.56□□□□□ -0.24
PCDHGA10-201ENST00000398610 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA10-201ENST00000398610 RSPH4AQ5TD94 716 aa13.54□□□□□ -0.24
PCDHGA10-201ENST00000398610 UBE2Q2Q8WVN8 375 aa13.54□□□□□ -0.24
PCDHGA10-201ENST00000398610 HDGFL2Q7Z4V5 671 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA10-201ENST00000398610 PZPP20742 1482 aa13.54□□□□□ -0.24
PCDHGA10-201ENST00000398610 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
PCDHGA10-201ENST00000398610 PTMAP06454 111 aaKnown RBP13.53□□□□□ -0.24
PCDHGA10-201ENST00000398610 PLCB2Q00722 1185 aa13.53□□□□□ -0.24
PCDHGA10-201ENST00000398610 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
PCDHGA10-201ENST00000398610 CCDC146Q8IYE0 955 aa13.53□□□□□ -0.24
PCDHGA10-201ENST00000398610 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
PCDHGA10-201ENST00000398610 CLUAP1Q96AJ1 413 aa13.53□□□□□ -0.24
PCDHGA10-201ENST00000398610 FGD1P98174 961 aa13.52□□□□□ -0.24
PCDHGA10-201ENST00000398610 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA10-201ENST00000398610 MSH5O43196 834 aa13.52□□□□□ -0.24
PCDHGA10-201ENST00000398610 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
PCDHGA10-201ENST00000398610 GOLGA6L22H0YM25 854 aa13.52□□□□□ -0.25
PCDHGA10-201ENST00000398610 ISY1Q9ULR0 285 aaKnown RBP13.52□□□□□ -0.25
PCDHGA10-201ENST00000398610 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.25
PCDHGA10-201ENST00000398610 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
PCDHGA10-201ENST00000398610 KCNJ4P48050 445 aa13.51□□□□□ -0.25
PCDHGA10-201ENST00000398610 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
PCDHGA10-201ENST00000398610 CLSTN1O94985 981 aa13.51□□□□□ -0.25
PCDHGA10-201ENST00000398610 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
PCDHGA10-201ENST00000398610 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
PCDHGA10-201ENST00000398610 DNTTIP2Q5QJE6 756 aaKnown RBP13.49□□□□□ -0.25
PCDHGA10-201ENST00000398610 ELL2O00472 640 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA10-201ENST00000398610 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
PCDHGA10-201ENST00000398610 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
PCDHGA10-201ENST00000398610 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms