RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 NEFMP07197 916 aa6.43□□□□□ -1.38
SMAD4-202ENST00000398417 PPP2R1AP30153 589 aa6.43□□□□□ -1.38
SMAD4-202ENST00000398417 TRAK1Q9UPV9 953 aa6.43□□□□□ -1.38
SMAD4-202ENST00000398417 RRP7AQ9Y3A4 280 aaKnown RBP6.43□□□□□ -1.38
SMAD4-202ENST00000398417 MAGI3Q5TCQ9 1506 aa6.43□□□□□ -1.38
SMAD4-202ENST00000398417 GOLGA2Q08379 1002 aa6.43□□□□□ -1.38
SMAD4-202ENST00000398417 UGGT2Q9NYU1 1516 aa6.43□□□□□ -1.38
SMAD4-202ENST00000398417 DHX29Q7Z478 1369 aaKnown RBP6.43□□□□□ -1.38
SMAD4-202ENST00000398417 RTN4Q9NQC3 1192 aaKnown RBP6.43□□□□□ -1.38
SMAD4-202ENST00000398417 CFAP70Q5T0N1 1121 aa6.43□□□□□ -1.38
SMAD4-202ENST00000398417 NUP153P49790 1475 aaKnown RBP6.42□□□□□ -1.38
SMAD4-202ENST00000398417 BRD4O60885 1362 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-202ENST00000398417 RPRD2Q5VT52 1461 aaKnown RBP6.42□□□□□ -1.38
SMAD4-202ENST00000398417 C9orf84Q5VXU9 1444 aa6.42□□□□□ -1.38
SMAD4-202ENST00000398417 DDRGK1Q96HY6 314 aa6.42□□□□□ -1.38
SMAD4-202ENST00000398417 STAG3Q9UJ98 1225 aa6.42□□□□□ -1.38
SMAD4-202ENST00000398417 STK26Q9P289 416 aa6.41□□□□□ -1.38
SMAD4-202ENST00000398417 PPM1GO15355 546 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-202ENST00000398417 CAMSAP2Q08AD1 1489 aa6.41□□□□□ -1.38
SMAD4-202ENST00000398417 C20orf194Q5TEA3 1177 aa6.4□□□□□ -1.38
SMAD4-202ENST00000398417 GRIN2AQ12879 1464 aa6.4□□□□□ -1.38
SMAD4-202ENST00000398417 U2SURPO15042 1029 aaKnown RBP6.4□□□□□ -1.38
SMAD4-202ENST00000398417 DENND4BO75064 1496 aaPredicted RBP6.4□□□□□ -1.39
SMAD4-202ENST00000398417 C14orf37Q86TY3 774 aa6.4□□□□□ -1.39
SMAD4-202ENST00000398417 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.39
SMAD4-202ENST00000398417 GPATCH8Q9UKJ3 1502 aaKnown RBP6.4□□□□□ -1.39
SMAD4-202ENST00000398417 CFAP53Q96M91 514 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 DISP3Q9P2K9 1392 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 ARHGEF11O15085 1522 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 PLPPR3Q6T4P5 718 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 KANK1Q14678 1352 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 PZPP20742 1482 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 THOC2Q8NI27 1593 aaKnown RBP6.39□□□□□ -1.39
SMAD4-202ENST00000398417 ARXQ96QS3 562 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 TMEM132EQ6IEE7 984 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 COG6Q9Y2V7 657 aa6.39□□□□□ -1.39
SMAD4-202ENST00000398417 BCAR3O75815 825 aa6.38□□□□□ -1.39
SMAD4-202ENST00000398417 BCL2L13Q9BXK5 485 aa6.38□□□□□ -1.39
SMAD4-202ENST00000398417 LMOD2Q6P5Q4 547 aa6.38□□□□□ -1.39
SMAD4-202ENST00000398417 DISP1Q96F81 1524 aa6.38□□□□□ -1.39
SMAD4-202ENST00000398417 SPRYD3Q8NCJ5 442 aa6.37□□□□□ -1.39
SMAD4-202ENST00000398417 DCAF8L1A6NGE4 600 aa6.37□□□□□ -1.39
SMAD4-202ENST00000398417 HECW1Q76N89 1606 aa6.37□□□□□ -1.39
SMAD4-202ENST00000398417 U2AF1L5P0DN76 240 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-202ENST00000398417 U2AF1Q01081 240 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMAD4-202ENST00000398417 KLHL34Q8N239 644 aa6.37□□□□□ -1.39
SMAD4-202ENST00000398417 PRKCSHP14314 528 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-202ENST00000398417 POGKQ9P215 609 aa6.37□□□□□ -1.39
SMAD4-202ENST00000398417 ERBINQ96RT1 1412 aa6.36□□□□□ -1.39
SMAD4-202ENST00000398417 MAGI1Q96QZ7 1491 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-202ENST00000398417 SRPK2P78362 688 aaKnown RBP6.36□□□□□ -1.39
SMAD4-202ENST00000398417 IQGAP2Q13576 1575 aa6.36□□□□□ -1.39
SMAD4-202ENST00000398417 ATP10BO94823 1461 aa6.36□□□□□ -1.39
SMAD4-202ENST00000398417 LAMC3Q9Y6N6 1575 aa6.36□□□□□ -1.39
SMAD4-202ENST00000398417 ADGRF5Q8IZF2 1346 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 CENPJQ9HC77 1338 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-202ENST00000398417 PER1O15534 1290 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-202ENST00000398417 PANK1Q8TE04 598 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 MS4A1P11836 297 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 MLECQ14165 292 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 BACH2Q9BYV9 841 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 MAPK8IP3Q9UPT6 1336 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 TESK2Q96S53 571 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 CENPQQ7L2Z9 268 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-202ENST00000398417 SYNJ2O15056 1496 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 PLEKHH2Q8IVE3 1493 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 CABP2Q9NPB3 220 aa6.35□□□□□ -1.39
SMAD4-202ENST00000398417 SPATA31E1Q6ZUB1 1445 aa6.34□□□□□ -1.39
SMAD4-202ENST00000398417 SLFN5Q08AF3 891 aa6.34□□□□□ -1.39
SMAD4-202ENST00000398417 GLIPR1L2Q4G1C9 344 aa6.34□□□□□ -1.39
SMAD4-202ENST00000398417 GGNBP2Q9H3C7 697 aa6.34□□□□□ -1.39
SMAD4-202ENST00000398417 TEX14Q8IWB6 1497 aa6.34□□□□□ -1.39
SMAD4-202ENST00000398417 FAM161AQ3B820 660 aa6.34□□□□□ -1.39
SMAD4-202ENST00000398417 E9PSI1 815 aa6.34□□□□□ -1.4
SMAD4-202ENST00000398417 SLC12A5Q9H2X9 1139 aa6.34□□□□□ -1.4
SMAD4-202ENST00000398417 TNNQ9UQP3 1299 aa6.34□□□□□ -1.4
SMAD4-202ENST00000398417 WASHC2CQ9Y4E1 1318 aa6.33□□□□□ -1.4
SMAD4-202ENST00000398417 KDM6BO15054 1643 aa6.33□□□□□ -1.4
SMAD4-202ENST00000398417 WDR62O43379 1518 aa6.33□□□□□ -1.4
SMAD4-202ENST00000398417 KDM5BQ9UGL1 1544 aa6.33□□□□□ -1.4
SMAD4-202ENST00000398417 UPF2Q9HAU5 1272 aaKnown RBP6.33□□□□□ -1.4
SMAD4-202ENST00000398417 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-202ENST00000398417 FTSJ3Q8IY81 847 aaKnown RBP6.32□□□□□ -1.4
SMAD4-202ENST00000398417 CFAP44Q96MT7 982 aa6.32□□□□□ -1.4
SMAD4-202ENST00000398417 SCAPERQ9BY12 1400 aa6.32□□□□□ -1.4
SMAD4-202ENST00000398417 EIF3AQ14152 1382 aaKnown RBP6.32□□□□□ -1.4
SMAD4-202ENST00000398417 MINK1Q8N4C8 1332 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-202ENST00000398417 TCP11L2Q8N4U5 519 aa6.32□□□□□ -1.4
SMAD4-202ENST00000398417 CUL7Q14999 1698 aa6.32□□□□□ -1.4
SMAD4-202ENST00000398417 ARHGAP5Q13017 1502 aa6.32□□□□□ -1.4
SMAD4-202ENST00000398417 DUSP27Q5VZP5 1158 aa6.32□□□□□ -1.4
SMAD4-202ENST00000398417 ITPRIPQ8IWB1 547 aa6.32□□□□□ -1.4
SMAD4-202ENST00000398417 RNF123Q5XPI4 1314 aa6.31□□□□□ -1.4
SMAD4-202ENST00000398417 SPINK5Q9NQ38 1064 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-202ENST00000398417 CCDC141Q6ZP82 1450 aa6.31□□□□□ -1.4
SMAD4-202ENST00000398417 TULP1O00294 542 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-202ENST00000398417 NCLP19338 710 aaKnown RBP6.31□□□□□ -1.4
SMAD4-202ENST00000398417 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
SMAD4-202ENST00000398417 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-202ENST00000398417 DMRT2Q9Y5R5 561 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms