RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 POGZQ7Z3K3 1410 aa10.52□□□□□ -0.73
RGPD1-201ENST00000398193 RALGAPBQ86X10 1494 aa10.51□□□□□ -0.73
RGPD1-201ENST00000398193 TRPM2O94759 1503 aa10.51□□□□□ -0.73
RGPD1-201ENST00000398193 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
RGPD1-201ENST00000398193 CEP152O94986 1710 aa10.5□□□□□ -0.73
RGPD1-201ENST00000398193 CD109Q6YHK3 1445 aa10.49□□□□□ -0.73
RGPD1-201ENST00000398193 SPAG9O60271 1321 aaKnown RBP10.49□□□□□ -0.73
RGPD1-201ENST00000398193 ZC3H13Q5T200 1668 aaKnown RBP10.49□□□□□ -0.73
RGPD1-201ENST00000398193 SPHKAPQ2M3C7 1700 aa10.49□□□□□ -0.73
RGPD1-201ENST00000398193 ZMYM4Q5VZL5 1548 aa10.49□□□□□ -0.73
RGPD1-201ENST00000398193 DHX29Q7Z478 1369 aaKnown RBP10.48□□□□□ -0.73
RGPD1-201ENST00000398193 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 PKD2Q13563 968 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 PTPRTO14522 1441 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 SCAPERQ9BY12 1400 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 MROH1Q8NDA8 1641 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 E9PCH4 1651 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 KANK1Q14678 1352 aa10.48□□□□□ -0.73
RGPD1-201ENST00000398193 ARID4BQ4LE39 1312 aaPredicted RBP10.48□□□□□ -0.73
RGPD1-201ENST00000398193 REREQ9P2R6 1566 aa10.47□□□□□ -0.73
RGPD1-201ENST00000398193 RICTORQ6R327 1708 aa10.46□□□□□ -0.73
RGPD1-201ENST00000398193 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
RGPD1-201ENST00000398193 TRPM1Q7Z4N2 1603 aa10.45□□□□□ -0.74
RGPD1-201ENST00000398193 CCDC144AA2RUR9 1427 aa10.45□□□□□ -0.74
RGPD1-201ENST00000398193 DIP2BQ9P265 1576 aa10.45□□□□□ -0.74
RGPD1-201ENST00000398193 SPATA31E1Q6ZUB1 1445 aa10.45□□□□□ -0.74
RGPD1-201ENST00000398193 KIAA1210Q9ULL0 1709 aa10.45□□□□□ -0.74
RGPD1-201ENST00000398193 EFCAB6Q5THR3 1501 aa10.44□□□□□ -0.74
RGPD1-201ENST00000398193 CENPBP07199 599 aaPredicted RBP10.44□□□□□ -0.74
RGPD1-201ENST00000398193 A2MP01023 1474 aa10.44□□□□□ -0.74
RGPD1-201ENST00000398193 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.74
RGPD1-201ENST00000398193 PLA2R1Q13018 1463 aa10.43□□□□□ -0.74
RGPD1-201ENST00000398193 ABCA6Q8N139 1617 aa10.43□□□□□ -0.74
RGPD1-201ENST00000398193 FRMPD1Q5SYB0 1578 aa10.43□□□□□ -0.74
RGPD1-201ENST00000398193 DIP2CQ9Y2E4 1556 aa10.41□□□□□ -0.74
RGPD1-201ENST00000398193 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
RGPD1-201ENST00000398193 PPRC1Q5VV67 1664 aaKnown RBP10.4□□□□□ -0.74
RGPD1-201ENST00000398193 CCER2I3L3R5 266 aa10.4□□□□□ -0.74
RGPD1-201ENST00000398193 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.74
RGPD1-201ENST00000398193 MIER1Q8N108 512 aa10.4□□□□□ -0.75
RGPD1-201ENST00000398193 MYOM2P54296 1465 aa10.39□□□□□ -0.75
RGPD1-201ENST00000398193 IFT172Q9UG01 1749 aa10.39□□□□□ -0.75
RGPD1-201ENST00000398193 CLTCL1P53675 1640 aa10.39□□□□□ -0.75
RGPD1-201ENST00000398193 MADDQ8WXG6 1647 aa10.39□□□□□ -0.75
RGPD1-201ENST00000398193 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
RGPD1-201ENST00000398193 CAMSAP1Q5T5Y3 1602 aa10.39□□□□□ -0.75
RGPD1-201ENST00000398193 FOXD1Q16676 465 aa10.38□□□□□ -0.75
RGPD1-201ENST00000398193 CNTLNQ9NXG0 1405 aa10.38□□□□□ -0.75
RGPD1-201ENST00000398193 HSPA5P11021 654 aaKnown RBP10.38□□□□□ -0.75
RGPD1-201ENST00000398193 AGLP35573 1532 aa10.38□□□□□ -0.75
RGPD1-201ENST00000398193 ARHGAP31Q2M1Z3 1444 aa10.37□□□□□ -0.75
RGPD1-201ENST00000398193 KIF1BO60333 1816 aa10.37□□□□□ -0.75
RGPD1-201ENST00000398193 ABCC3O15438 1527 aa10.36□□□□□ -0.75
RGPD1-201ENST00000398193 CCDC7Q96M83 1385 aa10.36□□□□□ -0.75
RGPD1-201ENST00000398193 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
RGPD1-201ENST00000398193 ADGRB3O60242 1522 aa10.36□□□□□ -0.75
RGPD1-201ENST00000398193 AFAP1Q8N556 730 aa10.35□□□□□ -0.75
RGPD1-201ENST00000398193 PIK3C2BO00750 1634 aa10.35□□□□□ -0.75
RGPD1-201ENST00000398193 IQGAP1P46940 1657 aa10.35□□□□□ -0.75
RGPD1-201ENST00000398193 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
RGPD1-201ENST00000398193 PPP6R1Q9UPN7 881 aa10.34□□□□□ -0.75
RGPD1-201ENST00000398193 USP47Q96K76 1375 aa10.34□□□□□ -0.75
RGPD1-201ENST00000398193 SETBP1Q9Y6X0 1596 aa10.33□□□□□ -0.76
RGPD1-201ENST00000398193 ANP32CO43423 234 aa10.32□□□□□ -0.76
RGPD1-201ENST00000398193 KIF13AQ9H1H9 1805 aa10.32□□□□□ -0.76
RGPD1-201ENST00000398193 KTN1Q86UP2 1357 aaKnown RBP10.32□□□□□ -0.76
RGPD1-201ENST00000398193 MYO3AQ8NEV4 1616 aa10.31□□□□□ -0.76
RGPD1-201ENST00000398193 ARHGEF40Q8TER5 1519 aa10.31□□□□□ -0.76
RGPD1-201ENST00000398193 WASHC2AQ641Q2 1341 aa10.31□□□□□ -0.76
RGPD1-201ENST00000398193 NOS1P29475 1434 aa10.3□□□□□ -0.76
RGPD1-201ENST00000398193 RPGRIP1LQ68CZ1 1315 aa10.3□□□□□ -0.76
RGPD1-201ENST00000398193 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
RGPD1-201ENST00000398193 PPLO60437 1756 aa10.3□□□□□ -0.76
RGPD1-201ENST00000398193 MROH2AA6NES4 1674 aa10.29□□□□□ -0.76
RGPD1-201ENST00000398193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.76
RGPD1-201ENST00000398193 DDX10Q13206 875 aaKnown RBP10.28□□□□□ -0.76
RGPD1-201ENST00000398193 KIF3BO15066 747 aa10.28□□□□□ -0.76
RGPD1-201ENST00000398193 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
RGPD1-201ENST00000398193 EIF3AQ14152 1382 aaKnown RBP10.27□□□□□ -0.77
RGPD1-201ENST00000398193 DCAF11Q8TEB1 546 aa10.27□□□□□ -0.77
RGPD1-201ENST00000398193 PREX1Q8TCU6 1659 aa10.27□□□□□ -0.77
RGPD1-201ENST00000398193 SCAF11Q99590 1463 aaKnown RBP10.27□□□□□ -0.77
RGPD1-201ENST00000398193 SYNMO15061 1565 aa10.26□□□□□ -0.77
RGPD1-201ENST00000398193 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
RGPD1-201ENST00000398193 KIF7Q2M1P5 1343 aa10.26□□□□□ -0.77
RGPD1-201ENST00000398193 ZFYVE9O95405 1425 aa10.26□□□□□ -0.77
RGPD1-201ENST00000398193 NPATQ14207 1427 aa10.26□□□□□ -0.77
RGPD1-201ENST00000398193 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
RGPD1-201ENST00000398193 SIGLEC1Q9BZZ2 1709 aa10.25□□□□□ -0.77
RGPD1-201ENST00000398193 UGGT1Q9NYU2 1555 aa10.25□□□□□ -0.77
RGPD1-201ENST00000398193 CYB5RLQ6IPT4 315 aa10.24□□□□□ -0.77
RGPD1-201ENST00000398193 WASHC2CQ9Y4E1 1318 aa10.23□□□□□ -0.77
RGPD1-201ENST00000398193 MYT1LQ9UL68 1186 aa10.23□□□□□ -0.77
RGPD1-201ENST00000398193 SPATA31D1Q6ZQQ2 1576 aa10.22□□□□□ -0.77
RGPD1-201ENST00000398193 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
RGPD1-201ENST00000398193 YEATS2Q9ULM3 1422 aa10.22□□□□□ -0.77
RGPD1-201ENST00000398193 NEXMIFQ5QGS0 1516 aa10.21□□□□□ -0.77
RGPD1-201ENST00000398193 PIK3C2GO75747 1445 aa10.21□□□□□ -0.77
RGPD1-201ENST00000398193 INSRP06213 1382 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms