RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 FOXD4L4Q8WXT5 416 aaPredicted RBP14.06□□□□□ -0.16
RGPD2-201ENST00000398146 PCMTD1Q96MG8 357 aaPredicted RBP14.05□□□□□ -0.16
RGPD2-201ENST00000398146 USP35Q9P2H5 1018 aa14.05□□□□□ -0.16
RGPD2-201ENST00000398146 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
RGPD2-201ENST00000398146 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
RGPD2-201ENST00000398146 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
RGPD2-201ENST00000398146 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
RGPD2-201ENST00000398146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.04□□□□□ -0.16
RGPD2-201ENST00000398146 KIF3BO15066 747 aa14.04□□□□□ -0.16
RGPD2-201ENST00000398146 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
RGPD2-201ENST00000398146 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
RGPD2-201ENST00000398146 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
RGPD2-201ENST00000398146 WWC2Q6AWC2 1192 aa14.03□□□□□ -0.16
RGPD2-201ENST00000398146 PSME1Q06323 249 aa14.02□□□□□ -0.16
RGPD2-201ENST00000398146 SYNE3Q6ZMZ3 975 aa14.02□□□□□ -0.16
RGPD2-201ENST00000398146 MIER1Q8N108 512 aa14.02□□□□□ -0.16
RGPD2-201ENST00000398146 CLIP1P30622 1438 aa14.02□□□□□ -0.17
RGPD2-201ENST00000398146 TPM2P07951 284 aa14.01□□□□□ -0.17
RGPD2-201ENST00000398146 ATF3P18847 181 aa14.01□□□□□ -0.17
RGPD2-201ENST00000398146 CCDC27Q2M243 656 aa14□□□□□ -0.17
RGPD2-201ENST00000398146 SIN3AQ96ST3 1273 aa14□□□□□ -0.17
RGPD2-201ENST00000398146 H3BQV1 296 aa14□□□□□ -0.17
RGPD2-201ENST00000398146 IFFO2Q5TF58 517 aa14□□□□□ -0.17
RGPD2-201ENST00000398146 GZF1Q9H116 711 aaPredicted RBP14□□□□□ -0.17
RGPD2-201ENST00000398146 CHMP4AQ9BY43 222 aa13.99□□□□□ -0.17
RGPD2-201ENST00000398146 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
RGPD2-201ENST00000398146 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
RGPD2-201ENST00000398146 HDAC5Q9UQL6 1122 aa13.99□□□□□ -0.17
RGPD2-201ENST00000398146 ODF2Q5BJF6 829 aa13.98□□□□□ -0.17
RGPD2-201ENST00000398146 SMC4Q9NTJ3 1288 aa13.98□□□□□ -0.17
RGPD2-201ENST00000398146 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
RGPD2-201ENST00000398146 RILPL2Q969X0 211 aa13.97□□□□□ -0.17
RGPD2-201ENST00000398146 TERF2IPQ9NYB0 399 aa13.97□□□□□ -0.17
RGPD2-201ENST00000398146 PLIN1O60240 522 aa13.97□□□□□ -0.17
RGPD2-201ENST00000398146 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
RGPD2-201ENST00000398146 TEFQ10587 303 aa13.97□□□□□ -0.17
RGPD2-201ENST00000398146 MCTP1Q6DN14 999 aa13.97□□□□□ -0.17
RGPD2-201ENST00000398146 CCAR2Q8N163 923 aaKnown RBP13.97□□□□□ -0.17
RGPD2-201ENST00000398146 CT47A1Q5JQC4 288 aaPredicted RBP13.97□□□□□ -0.17
RGPD2-201ENST00000398146 MFAP1P55081 439 aaKnown RBP13.96□□□□□ -0.17
RGPD2-201ENST00000398146 CCDC146Q8IYE0 955 aa13.96□□□□□ -0.17
RGPD2-201ENST00000398146 HMMRO75330 724 aa13.96□□□□□ -0.17
RGPD2-201ENST00000398146 KDM4AO75164 1064 aa13.96□□□□□ -0.18
RGPD2-201ENST00000398146 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
RGPD2-201ENST00000398146 FAM184AQ8NB25 1140 aa13.95□□□□□ -0.18
RGPD2-201ENST00000398146 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
RGPD2-201ENST00000398146 FOXD4L6Q3SYB3 417 aaPredicted RBP13.95□□□□□ -0.18
RGPD2-201ENST00000398146 FOXD4L3Q6VB84 417 aaPredicted RBP13.95□□□□□ -0.18
RGPD2-201ENST00000398146 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
RGPD2-201ENST00000398146 CLUAP1Q96AJ1 413 aa13.94□□□□□ -0.18
RGPD2-201ENST00000398146 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
RGPD2-201ENST00000398146 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
RGPD2-201ENST00000398146 FOSBP53539 338 aa13.92□□□□□ -0.18
RGPD2-201ENST00000398146 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
RGPD2-201ENST00000398146 CCDC97Q96F63 343 aaPredicted RBP13.92□□□□□ -0.18
RGPD2-201ENST00000398146 NUTM2GQ5VZR2 741 aa13.92□□□□□ -0.18
RGPD2-201ENST00000398146 TRIM29Q14134 588 aa13.92□□□□□ -0.18
RGPD2-201ENST00000398146 STRN4Q9NRL3 753 aa13.92□□□□□ -0.18
RGPD2-201ENST00000398146 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
RGPD2-201ENST00000398146 PKD2Q13563 968 aa13.91□□□□□ -0.18
RGPD2-201ENST00000398146 ROCK2O75116 1388 aaKnown RBP13.91□□□□□ -0.18
RGPD2-201ENST00000398146 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
RGPD2-201ENST00000398146 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
RGPD2-201ENST00000398146 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.18
RGPD2-201ENST00000398146 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
RGPD2-201ENST00000398146 ATP2B2Q01814 1243 aa13.9□□□□□ -0.18
RGPD2-201ENST00000398146 EFCAB2Q5VUJ9 269 aa13.9□□□□□ -0.18
RGPD2-201ENST00000398146 ERICH2A1L162 156 aa13.89□□□□□ -0.19
RGPD2-201ENST00000398146 SLKQ9H2G2 1235 aaPredicted RBP13.89□□□□□ -0.19
RGPD2-201ENST00000398146 TNNT3P45378 269 aaPredicted RBP13.89□□□□□ -0.19
RGPD2-201ENST00000398146 SYAP1Q96A49 352 aaPredicted RBP13.89□□□□□ -0.19
RGPD2-201ENST00000398146 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
RGPD2-201ENST00000398146 CCDC47Q96A33 483 aaKnown RBP13.89□□□□□ -0.19
RGPD2-201ENST00000398146 COG3Q96JB2 828 aa13.88□□□□□ -0.19
RGPD2-201ENST00000398146 RWDD1Q9H446 243 aaPredicted RBP13.88□□□□□ -0.19
RGPD2-201ENST00000398146 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
RGPD2-201ENST00000398146 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
RGPD2-201ENST00000398146 NAP1L1P55209 391 aaKnown RBP13.88□□□□□ -0.19
RGPD2-201ENST00000398146 GRM1Q13255 1194 aa13.87□□□□□ -0.19
RGPD2-201ENST00000398146 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
RGPD2-201ENST00000398146 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
RGPD2-201ENST00000398146 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
RGPD2-201ENST00000398146 KIF3AQ9Y496 699 aa13.87□□□□□ -0.19
RGPD2-201ENST00000398146 AIMP1Q12904 312 aaKnown RBP13.87□□□□□ -0.19
RGPD2-201ENST00000398146 CSPP1Q1MSJ5 1256 aa13.87□□□□□ -0.19
RGPD2-201ENST00000398146 NLRP2Q9NX02 1062 aa13.87□□□□□ -0.19
RGPD2-201ENST00000398146 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
RGPD2-201ENST00000398146 KTN1Q86UP2 1357 aaKnown RBP13.86□□□□□ -0.19
RGPD2-201ENST00000398146 TPM1P09493 284 aa13.86□□□□□ -0.19
RGPD2-201ENST00000398146 LMOD3Q0VAK6 560 aa13.85□□□□□ -0.19
RGPD2-201ENST00000398146 HSP90AB2PQ58FF8 381 aa13.85□□□□□ -0.19
RGPD2-201ENST00000398146 EPS15P42566 896 aa13.84□□□□□ -0.19
RGPD2-201ENST00000398146 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
RGPD2-201ENST00000398146 CPLX1O14810 134 aa13.83□□□□□ -0.2
RGPD2-201ENST00000398146 TRDNQ13061 729 aa13.83□□□□□ -0.2
RGPD2-201ENST00000398146 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
RGPD2-201ENST00000398146 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
RGPD2-201ENST00000398146 AK7Q96M32 723 aa13.83□□□□□ -0.2
RGPD2-201ENST00000398146 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
RGPD2-201ENST00000398146 LRRFIP1Q32MZ4 808 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms