RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 DHX29Q7Z478 1369 aaKnown RBP21.93■■□□□ 1.1
CCHCR1-202ENST00000396263 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCHCR1-202ENST00000396263 KIF15Q9NS87 1388 aa21.92■■□□□ 1.1
CCHCR1-202ENST00000396263 ERICH6BQ5W0A0 696 aa21.92■■□□□ 1.1
CCHCR1-202ENST00000396263 RBM19Q9Y4C8 960 aaKnown RBP21.92■■□□□ 1.1
CCHCR1-202ENST00000396263 ARAP3Q8WWN8 1544 aa21.91■■□□□ 1.1
CCHCR1-202ENST00000396263 FAM9BQ8IZU0 186 aa21.9■■□□□ 1.1
CCHCR1-202ENST00000396263 ABCC1P33527 1531 aa21.9■■□□□ 1.1
CCHCR1-202ENST00000396263 PLEKHH2Q8IVE3 1493 aa21.89■■□□□ 1.09
CCHCR1-202ENST00000396263 CYB5RLQ6IPT4 315 aa21.89■■□□□ 1.09
CCHCR1-202ENST00000396263 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
CCHCR1-202ENST00000396263 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
CCHCR1-202ENST00000396263 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
CCHCR1-202ENST00000396263 MAST1Q9Y2H9 1570 aa21.86■■□□□ 1.09
CCHCR1-202ENST00000396263 RSPH4AQ5TD94 716 aa21.85■■□□□ 1.09
CCHCR1-202ENST00000396263 FANCAO15360 1455 aa21.83■■□□□ 1.08
CCHCR1-202ENST00000396263 FAM135AQ9P2D6 1515 aa21.83■■□□□ 1.08
CCHCR1-202ENST00000396263 TRAPPC8Q9Y2L5 1435 aa21.81■■□□□ 1.08
CCHCR1-202ENST00000396263 IRX6P78412 446 aaPredicted RBP21.8■■□□□ 1.08
CCHCR1-202ENST00000396263 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
CCHCR1-202ENST00000396263 MSH5O43196 834 aa21.79■■□□□ 1.08
CCHCR1-202ENST00000396263 UNC13BO14795 1591 aa21.79■■□□□ 1.08
CCHCR1-202ENST00000396263 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
CCHCR1-202ENST00000396263 PPP4R2Q9NY27 417 aa21.77■■□□□ 1.07
CCHCR1-202ENST00000396263 POLR3GLQ9BT43 218 aa21.74■■□□□ 1.07
CCHCR1-202ENST00000396263 E9PCH4 1651 aa21.74■■□□□ 1.07
CCHCR1-202ENST00000396263 ADGRL1O94910 1474 aa21.74■■□□□ 1.07
CCHCR1-202ENST00000396263 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
CCHCR1-202ENST00000396263 CD109Q6YHK3 1445 aa21.74■■□□□ 1.07
CCHCR1-202ENST00000396263 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
CCHCR1-202ENST00000396263 PRKCSHP14314 528 aaPredicted RBP21.73■■□□□ 1.07
CCHCR1-202ENST00000396263 SMG6Q86US8 1419 aaKnown RBP21.73■■□□□ 1.07
CCHCR1-202ENST00000396263 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
CCHCR1-202ENST00000396263 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
CCHCR1-202ENST00000396263 ZFYVE16Q7Z3T8 1539 aa21.71■■□□□ 1.07
CCHCR1-202ENST00000396263 CCDC144AA2RUR9 1427 aa21.71■■□□□ 1.07
CCHCR1-202ENST00000396263 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
CCHCR1-202ENST00000396263 KTN1Q86UP2 1357 aaKnown RBP21.71■■□□□ 1.07
CCHCR1-202ENST00000396263 PRAG1Q86YV5 1406 aa21.71■■□□□ 1.07
CCHCR1-202ENST00000396263 IQGAP3Q86VI3 1631 aa21.7■■□□□ 1.06
CCHCR1-202ENST00000396263 SCAPERQ9BY12 1400 aa21.7■■□□□ 1.06
CCHCR1-202ENST00000396263 CFAP74Q9C0B2 1584 aa21.69■■□□□ 1.06
CCHCR1-202ENST00000396263 PLA2R1Q13018 1463 aa21.68■■□□□ 1.06
CCHCR1-202ENST00000396263 INO80Q9ULG1 1556 aaPredicted RBP21.68■■□□□ 1.06
CCHCR1-202ENST00000396263 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
CCHCR1-202ENST00000396263 MAP3K4Q9Y6R4 1608 aa21.67■■□□□ 1.06
CCHCR1-202ENST00000396263 DUOX2Q9NRD8 1548 aa21.67■■□□□ 1.06
CCHCR1-202ENST00000396263 LAMC1P11047 1609 aa21.66■■□□□ 1.06
CCHCR1-202ENST00000396263 SPAG9O60271 1321 aaKnown RBP21.66■■□□□ 1.06
CCHCR1-202ENST00000396263 GPRASP1Q5JY77 1395 aa21.65■■□□□ 1.06
CCHCR1-202ENST00000396263 NUDCQ9Y266 331 aa21.65■■□□□ 1.06
CCHCR1-202ENST00000396263 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
CCHCR1-202ENST00000396263 RTEL1-TNFRSF6BF6WH68 1400 aa21.65■■□□□ 1.06
CCHCR1-202ENST00000396263 ATP7AQ04656 1500 aa21.64■■□□□ 1.06
CCHCR1-202ENST00000396263 BRD4O60885 1362 aaPredicted RBP21.64■■□□□ 1.05
CCHCR1-202ENST00000396263 GLI2P10070 1586 aa21.64■■□□□ 1.05
CCHCR1-202ENST00000396263 DIP2BQ9P265 1576 aa21.64■■□□□ 1.05
CCHCR1-202ENST00000396263 RALBP1Q15311 655 aa21.63■■□□□ 1.05
CCHCR1-202ENST00000396263 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
CCHCR1-202ENST00000396263 ATP10AO60312 1499 aa21.63■■□□□ 1.05
CCHCR1-202ENST00000396263 A2MP01023 1474 aa21.63■■□□□ 1.05
CCHCR1-202ENST00000396263 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
CCHCR1-202ENST00000396263 RNF123Q5XPI4 1314 aa21.62■■□□□ 1.05
CCHCR1-202ENST00000396263 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
CCHCR1-202ENST00000396263 MYBBP1AQ9BQG0 1328 aaKnown RBP21.62■■□□□ 1.05
CCHCR1-202ENST00000396263 ERBINQ96RT1 1412 aa21.61■■□□□ 1.05
CCHCR1-202ENST00000396263 EIF2AK4Q9P2K8 1649 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-202ENST00000396263 PRDM15P57071 1507 aaPredicted RBP21.6■■□□□ 1.05
CCHCR1-202ENST00000396263 KIDINS220Q9ULH0 1771 aa21.59■■□□□ 1.05
CCHCR1-202ENST00000396263 FANCIQ9NVI1 1328 aa21.59■■□□□ 1.05
CCHCR1-202ENST00000396263 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
CCHCR1-202ENST00000396263 NEO1Q92859 1461 aa21.58■■□□□ 1.05
CCHCR1-202ENST00000396263 POGZQ7Z3K3 1410 aa21.58■■□□□ 1.04
CCHCR1-202ENST00000396263 B4GALNT3Q6L9W6 998 aa21.56■■□□□ 1.04
CCHCR1-202ENST00000396263 COL17A1Q9UMD9 1497 aaPredicted RBP21.56■■□□□ 1.04
CCHCR1-202ENST00000396263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.55■■□□□ 1.04
CCHCR1-202ENST00000396263 RGL3Q3MIN7 710 aa21.54■■□□□ 1.04
CCHCR1-202ENST00000396263 PARD3Q8TEW0 1356 aa21.54■■□□□ 1.04
CCHCR1-202ENST00000396263 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
CCHCR1-202ENST00000396263 NBPF1Q3BBV0 1214 aa21.54■■□□□ 1.04
CCHCR1-202ENST00000396263 TSPOAP1O95153 1857 aa21.53■■□□□ 1.04
CCHCR1-202ENST00000396263 PPRC1Q5VV67 1664 aaKnown RBP21.52■■□□□ 1.04
CCHCR1-202ENST00000396263 MYT1LQ9UL68 1186 aa21.51■■□□□ 1.03
CCHCR1-202ENST00000396263 HECW2Q9P2P5 1572 aa21.51■■□□□ 1.03
CCHCR1-202ENST00000396263 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
CCHCR1-202ENST00000396263 DEPDC5O75140 1603 aa21.5■■□□□ 1.03
CCHCR1-202ENST00000396263 RICTORQ6R327 1708 aa21.5■■□□□ 1.03
CCHCR1-202ENST00000396263 PER1O15534 1290 aaPredicted RBP21.5■■□□□ 1.03
CCHCR1-202ENST00000396263 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
CCHCR1-202ENST00000396263 TESK2Q96S53 571 aa21.5■■□□□ 1.03
CCHCR1-202ENST00000396263 KIF13AQ9H1H9 1805 aa21.5■■□□□ 1.03
CCHCR1-202ENST00000396263 WASHC2CQ9Y4E1 1318 aa21.49■■□□□ 1.03
CCHCR1-202ENST00000396263 MLH3Q9UHC1 1453 aa21.48■■□□□ 1.03
CCHCR1-202ENST00000396263 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
CCHCR1-202ENST00000396263 RAPGEF3O95398 923 aa21.47■■□□□ 1.03
CCHCR1-202ENST00000396263 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
CCHCR1-202ENST00000396263 ERICH6Q7L0X2 663 aa21.46■■□□□ 1.03
CCHCR1-202ENST00000396263 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
CCHCR1-202ENST00000396263 MROH1Q8NDA8 1641 aa21.43■■□□□ 1.02
CCHCR1-202ENST00000396263 INSRP06213 1382 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms