RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 COG6Q9Y2V7 657 aa17.62■□□□□ 0.41
CCP110-203ENST00000396212 GOLGA6L1Q8N7Z2 621 aa17.62■□□□□ 0.41
CCP110-203ENST00000396212 PHLDB1Q86UU1 1377 aa17.61■□□□□ 0.41
CCP110-203ENST00000396212 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
CCP110-203ENST00000396212 HDGFL2Q7Z4V5 671 aaPredicted RBP17.59■□□□□ 0.41
CCP110-203ENST00000396212 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.41
CCP110-203ENST00000396212 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.41
CCP110-203ENST00000396212 PANK3Q9H999 370 aa17.58■□□□□ 0.41
CCP110-203ENST00000396212 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.4
CCP110-203ENST00000396212 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
CCP110-203ENST00000396212 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.4
CCP110-203ENST00000396212 NOC3LQ8WTT2 800 aaKnown RBP17.57■□□□□ 0.4
CCP110-203ENST00000396212 CHMP5Q9NZZ3 219 aa17.57■□□□□ 0.4
CCP110-203ENST00000396212 ZNF592Q92610 1267 aa17.56■□□□□ 0.4
CCP110-203ENST00000396212 HMMRO75330 724 aa17.56■□□□□ 0.4
CCP110-203ENST00000396212 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.55■□□□□ 0.4
CCP110-203ENST00000396212 KIF16BQ96L93 1317 aa17.54■□□□□ 0.4
CCP110-203ENST00000396212 PKNOX2Q96KN3 472 aa17.53■□□□□ 0.4
CCP110-203ENST00000396212 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
CCP110-203ENST00000396212 E9PSI1 815 aa17.53■□□□□ 0.4
CCP110-203ENST00000396212 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
CCP110-203ENST00000396212 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.4
CCP110-203ENST00000396212 NACADO15069 1562 aa17.52■□□□□ 0.4
CCP110-203ENST00000396212 CREBRFQ8IUR6 639 aa17.52■□□□□ 0.39
CCP110-203ENST00000396212 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
CCP110-203ENST00000396212 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
CCP110-203ENST00000396212 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
CCP110-203ENST00000396212 ZKSCAN2Q63HK3 967 aa17.51■□□□□ 0.39
CCP110-203ENST00000396212 CLSTN1O94985 981 aa17.51■□□□□ 0.39
CCP110-203ENST00000396212 RILPL2Q969X0 211 aa17.51■□□□□ 0.39
CCP110-203ENST00000396212 CCAR2Q8N163 923 aaKnown RBP17.5■□□□□ 0.39
CCP110-203ENST00000396212 GPATCH3Q96I76 525 aa17.5■□□□□ 0.39
CCP110-203ENST00000396212 FHOD3Q2V2M9 1422 aa17.49■□□□□ 0.39
CCP110-203ENST00000396212 PRKCSHP14314 528 aaPredicted RBP17.49■□□□□ 0.39
CCP110-203ENST00000396212 USP47Q96K76 1375 aa17.49■□□□□ 0.39
CCP110-203ENST00000396212 FRAT2O75474 233 aaPredicted RBP17.49■□□□□ 0.39
CCP110-203ENST00000396212 ELL2O00472 640 aaPredicted RBP17.48■□□□□ 0.39
CCP110-203ENST00000396212 MCTP1Q6DN14 999 aa17.48■□□□□ 0.39
CCP110-203ENST00000396212 APAF1O14727 1248 aa17.48■□□□□ 0.39
CCP110-203ENST00000396212 NPHP1O15259 732 aa17.48■□□□□ 0.39
CCP110-203ENST00000396212 GOLGA6L19H0YKK7 550 aa17.47■□□□□ 0.39
CCP110-203ENST00000396212 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
CCP110-203ENST00000396212 MRE11P49959 708 aa17.46■□□□□ 0.39
CCP110-203ENST00000396212 RUSC2Q8N2Y8 1516 aa17.46■□□□□ 0.39
CCP110-203ENST00000396212 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
CCP110-203ENST00000396212 GGT6Q6P531 493 aa17.45■□□□□ 0.38
CCP110-203ENST00000396212 CHMP3Q9Y3E7 222 aa17.45■□□□□ 0.38
CCP110-203ENST00000396212 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
CCP110-203ENST00000396212 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
CCP110-203ENST00000396212 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
CCP110-203ENST00000396212 BECN2A8MW95 431 aa17.44■□□□□ 0.38
CCP110-203ENST00000396212 H3BQV1 296 aa17.44■□□□□ 0.38
CCP110-203ENST00000396212 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
CCP110-203ENST00000396212 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
CCP110-203ENST00000396212 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
CCP110-203ENST00000396212 TPM3P06753 285 aa17.43■□□□□ 0.38
CCP110-203ENST00000396212 NASPP49321 788 aaPredicted RBP17.43■□□□□ 0.38
CCP110-203ENST00000396212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
CCP110-203ENST00000396212 RBM10P98175 930 aaKnown RBP17.42■□□□□ 0.38
CCP110-203ENST00000396212 SETQ01105 290 aaPredicted RBP17.42■□□□□ 0.38
CCP110-203ENST00000396212 ATP6V1DQ9Y5K8 247 aa17.42■□□□□ 0.38
CCP110-203ENST00000396212 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCP110-203ENST00000396212 CCDC7Q96M83 1385 aa17.42■□□□□ 0.38
CCP110-203ENST00000396212 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
CCP110-203ENST00000396212 CNTLNQ9NXG0 1405 aa17.41■□□□□ 0.38
CCP110-203ENST00000396212 TRAK2O60296 914 aa17.41■□□□□ 0.38
CCP110-203ENST00000396212 WIZO95785 1651 aa17.41■□□□□ 0.38
CCP110-203ENST00000396212 PDE4CQ08493 712 aa17.41■□□□□ 0.38
CCP110-203ENST00000396212 KIF7Q2M1P5 1343 aa17.4■□□□□ 0.38
CCP110-203ENST00000396212 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
CCP110-203ENST00000396212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCP110-203ENST00000396212 PANK1Q8TE04 598 aa17.39■□□□□ 0.37
CCP110-203ENST00000396212 MLECQ14165 292 aa17.39■□□□□ 0.37
CCP110-203ENST00000396212 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
CCP110-203ENST00000396212 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.37
CCP110-203ENST00000396212 TPM2P07951 284 aa17.38■□□□□ 0.37
CCP110-203ENST00000396212 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
CCP110-203ENST00000396212 ZNF330Q9Y3S2 320 aaPredicted RBP17.38■□□□□ 0.37
CCP110-203ENST00000396212 CCDC34Q96HJ3 373 aa17.38■□□□□ 0.37
CCP110-203ENST00000396212 MSH5O43196 834 aa17.38■□□□□ 0.37
CCP110-203ENST00000396212 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
CCP110-203ENST00000396212 RASSF8Q8NHQ8 419 aa17.37■□□□□ 0.37
CCP110-203ENST00000396212 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
CCP110-203ENST00000396212 RNF214Q8ND24 703 aa17.37■□□□□ 0.37
CCP110-203ENST00000396212 CCDC39Q9UFE4 941 aa17.37■□□□□ 0.37
CCP110-203ENST00000396212 GPS2Q13227 327 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 TEX35Q5T0J7 233 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 PES1O00541 588 aaKnown RBP17.36■□□□□ 0.37
CCP110-203ENST00000396212 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 TRAK1Q9UPV9 953 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 REC8O95072 547 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 LNPKQ9C0E8 428 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 AKNAQ7Z591 1439 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 NUCB2P80303 420 aa17.36■□□□□ 0.37
CCP110-203ENST00000396212 WASHC2AQ641Q2 1341 aa17.35■□□□□ 0.37
CCP110-203ENST00000396212 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
CCP110-203ENST00000396212 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
CCP110-203ENST00000396212 HOMER1Q86YM7 354 aa17.34■□□□□ 0.37
CCP110-203ENST00000396212 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
CCP110-203ENST00000396212 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms