RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ANP32CO43423 234 aa17.02■□□□□ 0.32
ITGB1-202ENST00000396033 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.31
ITGB1-202ENST00000396033 CD109Q6YHK3 1445 aa17.01■□□□□ 0.31
ITGB1-202ENST00000396033 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
ITGB1-202ENST00000396033 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
ITGB1-202ENST00000396033 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
ITGB1-202ENST00000396033 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
ITGB1-202ENST00000396033 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
ITGB1-202ENST00000396033 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
ITGB1-202ENST00000396033 ZNF518AQ6AHZ1 1483 aa16.97■□□□□ 0.31
ITGB1-202ENST00000396033 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
ITGB1-202ENST00000396033 USP47Q96K76 1375 aa16.97■□□□□ 0.31
ITGB1-202ENST00000396033 CCDC7Q96M83 1385 aa16.97■□□□□ 0.31
ITGB1-202ENST00000396033 ATP10AO60312 1499 aa16.96■□□□□ 0.31
ITGB1-202ENST00000396033 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
ITGB1-202ENST00000396033 EIF2AK4Q9P2K8 1649 aaKnown RBP16.94■□□□□ 0.3
ITGB1-202ENST00000396033 KDM5CP41229 1560 aa16.94■□□□□ 0.3
ITGB1-202ENST00000396033 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
ITGB1-202ENST00000396033 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
ITGB1-202ENST00000396033 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-202ENST00000396033 CNTLNQ9NXG0 1405 aa16.94■□□□□ 0.3
ITGB1-202ENST00000396033 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
ITGB1-202ENST00000396033 E9PCH4 1651 aa16.93■□□□□ 0.3
ITGB1-202ENST00000396033 KANK1Q14678 1352 aa16.93■□□□□ 0.3
ITGB1-202ENST00000396033 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
ITGB1-202ENST00000396033 KIF3BO15066 747 aa16.93■□□□□ 0.3
ITGB1-202ENST00000396033 RGL3Q3MIN7 710 aa16.93■□□□□ 0.3
ITGB1-202ENST00000396033 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
ITGB1-202ENST00000396033 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
ITGB1-202ENST00000396033 KIF7Q2M1P5 1343 aa16.91■□□□□ 0.3
ITGB1-202ENST00000396033 A2MP01023 1474 aa16.91■□□□□ 0.3
ITGB1-202ENST00000396033 TET3O43151 1660 aa16.91■□□□□ 0.3
ITGB1-202ENST00000396033 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
ITGB1-202ENST00000396033 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
ITGB1-202ENST00000396033 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
ITGB1-202ENST00000396033 PRAG1Q86YV5 1406 aa16.9■□□□□ 0.3
ITGB1-202ENST00000396033 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
ITGB1-202ENST00000396033 VWDEQ8N2E2 1590 aa16.9■□□□□ 0.3
ITGB1-202ENST00000396033 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.29
ITGB1-202ENST00000396033 NEO1Q92859 1461 aa16.89■□□□□ 0.29
ITGB1-202ENST00000396033 TRPM2O94759 1503 aa16.89■□□□□ 0.29
ITGB1-202ENST00000396033 MROH1Q8NDA8 1641 aa16.88■□□□□ 0.29
ITGB1-202ENST00000396033 HECW2Q9P2P5 1572 aa16.88■□□□□ 0.29
ITGB1-202ENST00000396033 SPHKAPQ2M3C7 1700 aa16.88■□□□□ 0.29
ITGB1-202ENST00000396033 BCORL1Q5H9F3 1711 aa16.88■□□□□ 0.29
ITGB1-202ENST00000396033 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
ITGB1-202ENST00000396033 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
ITGB1-202ENST00000396033 PTPRTO14522 1441 aa16.85■□□□□ 0.29
ITGB1-202ENST00000396033 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
ITGB1-202ENST00000396033 CLTCL1P53675 1640 aa16.83■□□□□ 0.28
ITGB1-202ENST00000396033 CEP152O94986 1710 aa16.83■□□□□ 0.28
ITGB1-202ENST00000396033 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
ITGB1-202ENST00000396033 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
ITGB1-202ENST00000396033 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
ITGB1-202ENST00000396033 ABCA6Q8N139 1617 aa16.82■□□□□ 0.28
ITGB1-202ENST00000396033 EFCAB6Q5THR3 1501 aa16.81■□□□□ 0.28
ITGB1-202ENST00000396033 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
ITGB1-202ENST00000396033 GLI2P10070 1586 aa16.81■□□□□ 0.28
ITGB1-202ENST00000396033 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
ITGB1-202ENST00000396033 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
ITGB1-202ENST00000396033 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
ITGB1-202ENST00000396033 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
ITGB1-202ENST00000396033 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
ITGB1-202ENST00000396033 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
ITGB1-202ENST00000396033 LAMC1P11047 1609 aa16.79■□□□□ 0.28
ITGB1-202ENST00000396033 RICTORQ6R327 1708 aa16.77■□□□□ 0.28
ITGB1-202ENST00000396033 PRKRIP1Q9H875 184 aaPredicted RBP16.77■□□□□ 0.27
ITGB1-202ENST00000396033 MADDQ8WXG6 1647 aa16.76■□□□□ 0.27
ITGB1-202ENST00000396033 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
ITGB1-202ENST00000396033 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
ITGB1-202ENST00000396033 GGT6Q6P531 493 aa16.75■□□□□ 0.27
ITGB1-202ENST00000396033 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
ITGB1-202ENST00000396033 UGGT1Q9NYU2 1555 aa16.75■□□□□ 0.27
ITGB1-202ENST00000396033 NEURL4Q96JN8 1562 aa16.72■□□□□ 0.27
ITGB1-202ENST00000396033 STAC3Q96MF2 364 aa16.72■□□□□ 0.27
ITGB1-202ENST00000396033 ABCC3O15438 1527 aa16.71■□□□□ 0.27
ITGB1-202ENST00000396033 KIF1BO60333 1816 aa16.71■□□□□ 0.27
ITGB1-202ENST00000396033 NPATQ14207 1427 aa16.7■□□□□ 0.26
ITGB1-202ENST00000396033 WASHC2CQ9Y4E1 1318 aa16.7■□□□□ 0.26
ITGB1-202ENST00000396033 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
ITGB1-202ENST00000396033 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
ITGB1-202ENST00000396033 COL17A1Q9UMD9 1497 aaPredicted RBP16.67■□□□□ 0.26
ITGB1-202ENST00000396033 MROH2AA6NES4 1674 aa16.67■□□□□ 0.26
ITGB1-202ENST00000396033 CAMSAP1Q5T5Y3 1602 aa16.67■□□□□ 0.26
ITGB1-202ENST00000396033 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
ITGB1-202ENST00000396033 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
ITGB1-202ENST00000396033 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
ITGB1-202ENST00000396033 MYOM2P54296 1465 aa16.66■□□□□ 0.26
ITGB1-202ENST00000396033 ZMYM4Q5VZL5 1548 aa16.66■□□□□ 0.26
ITGB1-202ENST00000396033 TESK2Q96S53 571 aa16.65■□□□□ 0.26
ITGB1-202ENST00000396033 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
ITGB1-202ENST00000396033 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
ITGB1-202ENST00000396033 CFAP65Q6ZU64 1925 aaKnown RBP16.65■□□□□ 0.26
ITGB1-202ENST00000396033 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
ITGB1-202ENST00000396033 IFT172Q9UG01 1749 aa16.64■□□□□ 0.25
ITGB1-202ENST00000396033 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
ITGB1-202ENST00000396033 HNRNPUQ00839 825 aaKnown RBP eCLIP16.63■□□□□ 0.25
ITGB1-202ENST00000396033 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
ITGB1-202ENST00000396033 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
ITGB1-202ENST00000396033 ZC3H13Q5T200 1668 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms