RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 NAP1L2Q9ULW6 460 aaPredicted RBP12.04□□□□□ -0.48
MSH5-205ENST00000395853 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
MSH5-205ENST00000395853 BRD2P25440 801 aaKnown RBP12.03□□□□□ -0.48
MSH5-205ENST00000395853 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
MSH5-205ENST00000395853 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
MSH5-205ENST00000395853 REREQ9P2R6 1566 aa12.02□□□□□ -0.48
MSH5-205ENST00000395853 MYO5CQ9NQX4 1742 aa12.02□□□□□ -0.49
MSH5-205ENST00000395853 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
MSH5-205ENST00000395853 ZNF518AQ6AHZ1 1483 aa12.01□□□□□ -0.49
MSH5-205ENST00000395853 PTPRTO14522 1441 aa12.01□□□□□ -0.49
MSH5-205ENST00000395853 MLECQ14165 292 aa12.01□□□□□ -0.49
MSH5-205ENST00000395853 UHRF1BP1Q6BDS2 1440 aa12.01□□□□□ -0.49
MSH5-205ENST00000395853 KDM5CP41229 1560 aa12□□□□□ -0.49
MSH5-205ENST00000395853 STRCQ7RTU9 1775 aa12□□□□□ -0.49
MSH5-205ENST00000395853 CCNB3Q8WWL7 1395 aa12□□□□□ -0.49
MSH5-205ENST00000395853 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
MSH5-205ENST00000395853 DHX37Q8IY37 1157 aaKnown RBP12□□□□□ -0.49
MSH5-205ENST00000395853 IQSEC2Q5JU85 1478 aa12□□□□□ -0.49
MSH5-205ENST00000395853 SOCS7O14512 581 aa11.99□□□□□ -0.49
MSH5-205ENST00000395853 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
MSH5-205ENST00000395853 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
MSH5-205ENST00000395853 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
MSH5-205ENST00000395853 IPO9Q96P70 1041 aaKnown RBP11.98□□□□□ -0.49
MSH5-205ENST00000395853 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
MSH5-205ENST00000395853 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
MSH5-205ENST00000395853 CASKIN1Q8WXD9 1431 aa11.98□□□□□ -0.49
MSH5-205ENST00000395853 FYCO1Q9BQS8 1478 aa11.98□□□□□ -0.49
MSH5-205ENST00000395853 AGLP35573 1532 aa11.97□□□□□ -0.49
MSH5-205ENST00000395853 DISP3Q9P2K9 1392 aa11.97□□□□□ -0.49
MSH5-205ENST00000395853 HSP90AA1P07900 732 aaKnown RBP11.97□□□□□ -0.49
MSH5-205ENST00000395853 KIF14Q15058 1648 aa11.96□□□□□ -0.49
MSH5-205ENST00000395853 MLH3Q9UHC1 1453 aa11.96□□□□□ -0.49
MSH5-205ENST00000395853 ANP32AP39687 249 aaKnown RBP11.96□□□□□ -0.49
MSH5-205ENST00000395853 HOMEZQ8IX15 550 aa11.96□□□□□ -0.49
MSH5-205ENST00000395853 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
MSH5-205ENST00000395853 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
MSH5-205ENST00000395853 TROQ12816 1431 aaPredicted RBP11.95□□□□□ -0.5
MSH5-205ENST00000395853 DIP2CQ9Y2E4 1556 aa11.95□□□□□ -0.5
MSH5-205ENST00000395853 CEBPAP49715 358 aaPredicted RBP11.94□□□□□ -0.5
MSH5-205ENST00000395853 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
MSH5-205ENST00000395853 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
MSH5-205ENST00000395853 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
MSH5-205ENST00000395853 ARHGAP5Q13017 1502 aa11.94□□□□□ -0.5
MSH5-205ENST00000395853 C3P01024 1663 aa11.93□□□□□ -0.5
MSH5-205ENST00000395853 TRAPPC8Q9Y2L5 1435 aa11.93□□□□□ -0.5
MSH5-205ENST00000395853 DHX57Q6P158 1386 aaKnown RBP11.93□□□□□ -0.5
MSH5-205ENST00000395853 GSE1Q14687 1217 aa11.93□□□□□ -0.5
MSH5-205ENST00000395853 ILDR2Q71H61 639 aa11.93□□□□□ -0.5
MSH5-205ENST00000395853 IPO4Q8TEX9 1081 aaKnown RBP11.93□□□□□ -0.5
MSH5-205ENST00000395853 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
MSH5-205ENST00000395853 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
MSH5-205ENST00000395853 GTF2E1P29083 439 aaPredicted RBP11.91□□□□□ -0.5
MSH5-205ENST00000395853 AFAP1Q8N556 730 aa11.91□□□□□ -0.5
MSH5-205ENST00000395853 ABCA6Q8N139 1617 aa11.91□□□□□ -0.5
MSH5-205ENST00000395853 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
MSH5-205ENST00000395853 NCOA1Q15788 1441 aa11.9□□□□□ -0.5
MSH5-205ENST00000395853 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
MSH5-205ENST00000395853 NPATQ14207 1427 aa11.9□□□□□ -0.5
MSH5-205ENST00000395853 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
MSH5-205ENST00000395853 RGS3P49796 1198 aa11.89□□□□□ -0.51
MSH5-205ENST00000395853 CDC42BPBQ9Y5S2 1711 aa11.89□□□□□ -0.51
MSH5-205ENST00000395853 MROH2AA6NES4 1674 aa11.89□□□□□ -0.51
MSH5-205ENST00000395853 ABCC1P33527 1531 aa11.89□□□□□ -0.51
MSH5-205ENST00000395853 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
MSH5-205ENST00000395853 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
MSH5-205ENST00000395853 ITSN2Q9NZM3 1697 aa11.88□□□□□ -0.51
MSH5-205ENST00000395853 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
MSH5-205ENST00000395853 MTUS2Q5JR59 1369 aa11.86□□□□□ -0.51
MSH5-205ENST00000395853 RAB3GAP2Q9H2M9 1393 aa11.86□□□□□ -0.51
MSH5-205ENST00000395853 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
MSH5-205ENST00000395853 CENPJQ9HC77 1338 aaPredicted RBP11.85□□□□□ -0.51
MSH5-205ENST00000395853 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
MSH5-205ENST00000395853 PPM1GO15355 546 aaPredicted RBP11.84□□□□□ -0.51
MSH5-205ENST00000395853 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
MSH5-205ENST00000395853 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
MSH5-205ENST00000395853 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
MSH5-205ENST00000395853 CAMSAP1Q5T5Y3 1602 aa11.83□□□□□ -0.52
MSH5-205ENST00000395853 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
MSH5-205ENST00000395853 PKD2Q13563 968 aa11.82□□□□□ -0.52
MSH5-205ENST00000395853 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
MSH5-205ENST00000395853 PPP4R2Q9NY27 417 aa11.82□□□□□ -0.52
MSH5-205ENST00000395853 ZNF142P52746 1687 aaPredicted RBP11.82□□□□□ -0.52
MSH5-205ENST00000395853 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
MSH5-205ENST00000395853 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
MSH5-205ENST00000395853 SAMD9LQ8IVG5 1584 aa11.81□□□□□ -0.52
MSH5-205ENST00000395853 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
MSH5-205ENST00000395853 PPP6R1Q9UPN7 881 aa11.81□□□□□ -0.52
MSH5-205ENST00000395853 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
MSH5-205ENST00000395853 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
MSH5-205ENST00000395853 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
MSH5-205ENST00000395853 SUPT6HQ7KZ85 1726 aaKnown RBP11.8□□□□□ -0.52
MSH5-205ENST00000395853 ZFP91Q96JP5 570 aaPredicted RBP11.8□□□□□ -0.52
MSH5-205ENST00000395853 PDCL3Q9H2J4 239 aa11.79□□□□□ -0.52
MSH5-205ENST00000395853 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
MSH5-205ENST00000395853 KIAA1107Q9UPP5 1409 aa11.79□□□□□ -0.52
MSH5-205ENST00000395853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
MSH5-205ENST00000395853 EHBP1L1Q8N3D4 1523 aa11.79□□□□□ -0.52
MSH5-205ENST00000395853 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
MSH5-205ENST00000395853 FRAT1Q92837 279 aaPredicted RBP11.78□□□□□ -0.52
MSH5-205ENST00000395853 PLXNC1O60486 1568 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms