RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-205ENST00000395757 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
SREBF1-205ENST00000395757 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
SREBF1-205ENST00000395757 SKAP1Q86WV1 359 aa19.15■□□□□ 0.66
SREBF1-205ENST00000395757 KIF14Q15058 1648 aa19.15■□□□□ 0.66
SREBF1-205ENST00000395757 ARHGAP5Q13017 1502 aa19.14■□□□□ 0.66
SREBF1-205ENST00000395757 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.66
SREBF1-205ENST00000395757 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
SREBF1-205ENST00000395757 ANP32AP39687 249 aaKnown RBP19.13■□□□□ 0.65
SREBF1-205ENST00000395757 RCAN3Q9UKA8 241 aa19.13■□□□□ 0.65
SREBF1-205ENST00000395757 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
SREBF1-205ENST00000395757 MYBBP1AQ9BQG0 1328 aaKnown RBP19.11■□□□□ 0.65
SREBF1-205ENST00000395757 PZPP20742 1482 aa19.11■□□□□ 0.65
SREBF1-205ENST00000395757 STK26Q9P289 416 aa19.1■□□□□ 0.65
SREBF1-205ENST00000395757 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
SREBF1-205ENST00000395757 RALBP1Q15311 655 aa19.09■□□□□ 0.65
SREBF1-205ENST00000395757 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
SREBF1-205ENST00000395757 MSH5O43196 834 aa19.06■□□□□ 0.64
SREBF1-205ENST00000395757 CFAP70Q5T0N1 1121 aa19.06■□□□□ 0.64
SREBF1-205ENST00000395757 RSPH4AQ5TD94 716 aa19.06■□□□□ 0.64
SREBF1-205ENST00000395757 RGS3P49796 1198 aa19.06■□□□□ 0.64
SREBF1-205ENST00000395757 DAXXQ9UER7 740 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-205ENST00000395757 PLEKHH2Q8IVE3 1493 aa19.06■□□□□ 0.64
SREBF1-205ENST00000395757 STAG3Q9UJ98 1225 aa19.05■□□□□ 0.64
SREBF1-205ENST00000395757 MLECQ14165 292 aa19.04■□□□□ 0.64
SREBF1-205ENST00000395757 TMEM132EQ6IEE7 984 aa19.04■□□□□ 0.64
SREBF1-205ENST00000395757 TEX14Q8IWB6 1497 aa19.04■□□□□ 0.64
SREBF1-205ENST00000395757 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
SREBF1-205ENST00000395757 ADAMTS8Q9UP79 889 aa19.03■□□□□ 0.64
SREBF1-205ENST00000395757 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
SREBF1-205ENST00000395757 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-205ENST00000395757 ZBTB47Q9UFB7 747 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-205ENST00000395757 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-205ENST00000395757 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-205ENST00000395757 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
SREBF1-205ENST00000395757 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
SREBF1-205ENST00000395757 RRP1P56182 461 aaKnown RBP18.98■□□□□ 0.63
SREBF1-205ENST00000395757 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-205ENST00000395757 SCAPERQ9BY12 1400 aa18.97■□□□□ 0.63
SREBF1-205ENST00000395757 DISP3Q9P2K9 1392 aa18.97■□□□□ 0.63
SREBF1-205ENST00000395757 CRBNQ96SW2 442 aa18.97■□□□□ 0.63
SREBF1-205ENST00000395757 DHX29Q7Z478 1369 aaKnown RBP18.96■□□□□ 0.63
SREBF1-205ENST00000395757 CCDC141Q6ZP82 1450 aa18.96■□□□□ 0.63
SREBF1-205ENST00000395757 APAF1O14727 1248 aa18.96■□□□□ 0.63
SREBF1-205ENST00000395757 PODXL2Q9NZ53 605 aa18.95■□□□□ 0.62
SREBF1-205ENST00000395757 KANK1Q14678 1352 aa18.94■□□□□ 0.62
SREBF1-205ENST00000395757 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
SREBF1-205ENST00000395757 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
SREBF1-205ENST00000395757 GCC2Q8IWJ2 1684 aa18.94■□□□□ 0.62
SREBF1-205ENST00000395757 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
SREBF1-205ENST00000395757 NUP160Q12769 1436 aa18.92■□□□□ 0.62
SREBF1-205ENST00000395757 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
SREBF1-205ENST00000395757 PAK3O75914 559 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-205ENST00000395757 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
SREBF1-205ENST00000395757 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
SREBF1-205ENST00000395757 U2SURPO15042 1029 aaKnown RBP18.91■□□□□ 0.62
SREBF1-205ENST00000395757 RAPGEF3O95398 923 aa18.91■□□□□ 0.62
SREBF1-205ENST00000395757 MORC1Q86VD1 984 aa18.91■□□□□ 0.62
SREBF1-205ENST00000395757 C20orf194Q5TEA3 1177 aa18.9■□□□□ 0.62
SREBF1-205ENST00000395757 SLC4A3P48751 1232 aa18.89■□□□□ 0.62
SREBF1-205ENST00000395757 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
SREBF1-205ENST00000395757 SRPK2P78362 688 aaKnown RBP18.88■□□□□ 0.61
SREBF1-205ENST00000395757 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
SREBF1-205ENST00000395757 ERICH6BQ5W0A0 696 aa18.88■□□□□ 0.61
SREBF1-205ENST00000395757 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
SREBF1-205ENST00000395757 TRAPPC8Q9Y2L5 1435 aa18.87■□□□□ 0.61
SREBF1-205ENST00000395757 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
SREBF1-205ENST00000395757 BRD4O60885 1362 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-205ENST00000395757 TESK2Q96S53 571 aa18.86■□□□□ 0.61
SREBF1-205ENST00000395757 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
SREBF1-205ENST00000395757 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
SREBF1-205ENST00000395757 ERBINQ96RT1 1412 aa18.84■□□□□ 0.61
SREBF1-205ENST00000395757 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-205ENST00000395757 POGKQ9P215 609 aa18.84■□□□□ 0.61
SREBF1-205ENST00000395757 FAM135AQ9P2D6 1515 aa18.83■□□□□ 0.61
SREBF1-205ENST00000395757 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
SREBF1-205ENST00000395757 SOX12O15370 315 aa18.82■□□□□ 0.6
SREBF1-205ENST00000395757 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
SREBF1-205ENST00000395757 UBE2Q2Q8WVN8 375 aa18.82■□□□□ 0.6
SREBF1-205ENST00000395757 PKNOX2Q96KN3 472 aa18.82■□□□□ 0.6
SREBF1-205ENST00000395757 ITSN2Q9NZM3 1697 aa18.82■□□□□ 0.6
SREBF1-205ENST00000395757 U2AF1L5P0DN76 240 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-205ENST00000395757 U2AF1Q01081 240 aaKnown RBP eCLIP18.81■□□□□ 0.6
SREBF1-205ENST00000395757 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-205ENST00000395757 PER1O15534 1290 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-205ENST00000395757 ABCC10Q5T3U5 1492 aa18.8■□□□□ 0.6
SREBF1-205ENST00000395757 NUTM2FA1L443 756 aa18.8■□□□□ 0.6
SREBF1-205ENST00000395757 CABP2Q9NPB3 220 aa18.79■□□□□ 0.6
SREBF1-205ENST00000395757 RALGAPBQ86X10 1494 aa18.79■□□□□ 0.6
SREBF1-205ENST00000395757 MBD5Q9P267 1494 aa18.79■□□□□ 0.6
SREBF1-205ENST00000395757 BCAR3O75815 825 aa18.79■□□□□ 0.6
SREBF1-205ENST00000395757 PDE4AP27815 886 aa18.79■□□□□ 0.6
SREBF1-205ENST00000395757 ARXQ96QS3 562 aa18.79■□□□□ 0.6
SREBF1-205ENST00000395757 PRAG1Q86YV5 1406 aa18.79■□□□□ 0.6
SREBF1-205ENST00000395757 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-205ENST00000395757 RTN4Q9NQC3 1192 aaKnown RBP18.77■□□□□ 0.6
SREBF1-205ENST00000395757 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.59
SREBF1-205ENST00000395757 FANCIQ9NVI1 1328 aa18.77■□□□□ 0.59
SREBF1-205ENST00000395757 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
SREBF1-205ENST00000395757 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms