RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 MAGI3Q5TCQ9 1506 aa10.23□□□□□ -0.77
PTPN20-208ENST00000395727 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
PTPN20-208ENST00000395727 PHF8Q9UPP1 1060 aa10.23□□□□□ -0.77
PTPN20-208ENST00000395727 NLRP6P59044 892 aa10.22□□□□□ -0.77
PTPN20-208ENST00000395727 IRX5P78411 483 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-208ENST00000395727 C7P10643 843 aa10.21□□□□□ -0.77
PTPN20-208ENST00000395727 PLCB2Q00722 1185 aa10.21□□□□□ -0.77
PTPN20-208ENST00000395727 FAM9AQ8IZU1 332 aaPredicted RBP10.21□□□□□ -0.77
PTPN20-208ENST00000395727 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
PTPN20-208ENST00000395727 RYDENQ9NUL5 291 aaKnown RBP10.21□□□□□ -0.77
PTPN20-208ENST00000395727 ATP10BO94823 1461 aa10.21□□□□□ -0.78
PTPN20-208ENST00000395727 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
PTPN20-208ENST00000395727 ABCA9Q8IUA7 1624 aa10.2□□□□□ -0.78
PTPN20-208ENST00000395727 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
PTPN20-208ENST00000395727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTPN20-208ENST00000395727 NUP153P49790 1475 aaKnown RBP10.19□□□□□ -0.78
PTPN20-208ENST00000395727 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
PTPN20-208ENST00000395727 POTEFA5A3E0 1075 aa10.18□□□□□ -0.78
PTPN20-208ENST00000395727 METRNQ9UJH8 293 aa10.18□□□□□ -0.78
PTPN20-208ENST00000395727 COL17A1Q9UMD9 1497 aaPredicted RBP10.17□□□□□ -0.78
PTPN20-208ENST00000395727 CD109Q6YHK3 1445 aa10.17□□□□□ -0.78
PTPN20-208ENST00000395727 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
PTPN20-208ENST00000395727 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
PTPN20-208ENST00000395727 FHOD3Q2V2M9 1422 aa10.16□□□□□ -0.78
PTPN20-208ENST00000395727 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
PTPN20-208ENST00000395727 PHLDB1Q86UU1 1377 aa10.15□□□□□ -0.78
PTPN20-208ENST00000395727 ARAP3Q8WWN8 1544 aa10.15□□□□□ -0.78
PTPN20-208ENST00000395727 PLCG2P16885 1265 aa10.14□□□□□ -0.79
PTPN20-208ENST00000395727 NEO1Q92859 1461 aa10.13□□□□□ -0.79
PTPN20-208ENST00000395727 ARHGAP35Q9NRY4 1499 aa10.13□□□□□ -0.79
PTPN20-208ENST00000395727 PPP1R37O75864 691 aa10.13□□□□□ -0.79
PTPN20-208ENST00000395727 SEC24BO95487 1268 aa10.13□□□□□ -0.79
PTPN20-208ENST00000395727 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
PTPN20-208ENST00000395727 FMN1Q68DA7 1419 aa10.13□□□□□ -0.79
PTPN20-208ENST00000395727 HECW1Q76N89 1606 aa10.12□□□□□ -0.79
PTPN20-208ENST00000395727 DPY19L2Q6NUT2 758 aa10.12□□□□□ -0.79
PTPN20-208ENST00000395727 CFAP74Q9C0B2 1584 aa10.1□□□□□ -0.79
PTPN20-208ENST00000395727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPN20-208ENST00000395727 KCNH8Q96L42 1107 aa10.08□□□□□ -0.8
PTPN20-208ENST00000395727 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
PTPN20-208ENST00000395727 CDK13Q14004 1512 aaKnown RBP10.07□□□□□ -0.8
PTPN20-208ENST00000395727 FRMPD1Q5SYB0 1578 aa10.06□□□□□ -0.8
PTPN20-208ENST00000395727 TTC37Q6PGP7 1564 aa10.06□□□□□ -0.8
PTPN20-208ENST00000395727 ADGRL1O94910 1474 aa10.06□□□□□ -0.8
PTPN20-208ENST00000395727 UBTFP17480 764 aaKnown RBP10.06□□□□□ -0.8
PTPN20-208ENST00000395727 PLEKHD1A6NEE1 506 aa10.05□□□□□ -0.8
PTPN20-208ENST00000395727 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
PTPN20-208ENST00000395727 ZMYM4Q5VZL5 1548 aa10.04□□□□□ -0.8
PTPN20-208ENST00000395727 L3MBTL3Q96JM7 780 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-208ENST00000395727 RICTORQ6R327 1708 aa10.04□□□□□ -0.8
PTPN20-208ENST00000395727 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 CASKIN1Q8WXD9 1431 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 LRRIQ1Q96JM4 1722 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 KIF14Q15058 1648 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 FANCAO15360 1455 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 CCDC18Q5T9S5 1454 aa10.03□□□□□ -0.8
PTPN20-208ENST00000395727 PCF11O94913 1555 aaKnown RBP10.02□□□□□ -0.81
PTPN20-208ENST00000395727 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
PTPN20-208ENST00000395727 FYCO1Q9BQS8 1478 aa10.02□□□□□ -0.81
PTPN20-208ENST00000395727 ARHGEF40Q8TER5 1519 aa10.02□□□□□ -0.81
PTPN20-208ENST00000395727 MYO5CQ9NQX4 1742 aa10.02□□□□□ -0.81
PTPN20-208ENST00000395727 PLCH2O75038 1416 aa10.01□□□□□ -0.81
PTPN20-208ENST00000395727 TROQ12816 1431 aaPredicted RBP10.01□□□□□ -0.81
PTPN20-208ENST00000395727 AKNAQ7Z591 1439 aa10.01□□□□□ -0.81
PTPN20-208ENST00000395727 RANGAP1P46060 587 aaPredicted RBP10.01□□□□□ -0.81
PTPN20-208ENST00000395727 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
PTPN20-208ENST00000395727 DENND4BO75064 1496 aaPredicted RBP10□□□□□ -0.81
PTPN20-208ENST00000395727 MAGI2Q86UL8 1455 aa10□□□□□ -0.81
PTPN20-208ENST00000395727 POTEJP0CG39 1038 aa10□□□□□ -0.81
PTPN20-208ENST00000395727 CDK11AQ9UQ88 783 aaPredicted RBP10□□□□□ -0.81
PTPN20-208ENST00000395727 CLIP1P30622 1438 aa9.99□□□□□ -0.81
PTPN20-208ENST00000395727 CADPS2Q86UW7 1296 aa9.99□□□□□ -0.81
PTPN20-208ENST00000395727 ADAMTSL3P82987 1691 aa9.98□□□□□ -0.81
PTPN20-208ENST00000395727 POGZQ7Z3K3 1410 aa9.98□□□□□ -0.81
PTPN20-208ENST00000395727 SLC24A1O60721 1099 aa9.97□□□□□ -0.81
PTPN20-208ENST00000395727 PREX2Q70Z35 1606 aa9.96□□□□□ -0.81
PTPN20-208ENST00000395727 G3V3G9 751 aa9.96□□□□□ -0.82
PTPN20-208ENST00000395727 KDM5CP41229 1560 aa9.96□□□□□ -0.82
PTPN20-208ENST00000395727 BCORL1Q5H9F3 1711 aa9.96□□□□□ -0.82
PTPN20-208ENST00000395727 RAPGEF3O95398 923 aa9.95□□□□□ -0.82
PTPN20-208ENST00000395727 ZFYVE16Q7Z3T8 1539 aa9.95□□□□□ -0.82
PTPN20-208ENST00000395727 ZNF518AQ6AHZ1 1483 aa9.94□□□□□ -0.82
PTPN20-208ENST00000395727 CDC42BPBQ9Y5S2 1711 aa9.93□□□□□ -0.82
PTPN20-208ENST00000395727 REREQ9P2R6 1566 aa9.93□□□□□ -0.82
PTPN20-208ENST00000395727 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
PTPN20-208ENST00000395727 EFCAB2Q5VUJ9 269 aa9.93□□□□□ -0.82
PTPN20-208ENST00000395727 ARHGAP5Q13017 1502 aa9.92□□□□□ -0.82
PTPN20-208ENST00000395727 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
PTPN20-208ENST00000395727 ABCC1P33527 1531 aa9.92□□□□□ -0.82
PTPN20-208ENST00000395727 CDC42BPAQ5VT25 1732 aa9.91□□□□□ -0.82
PTPN20-208ENST00000395727 NCKAP5LQ9HCH0 1330 aa9.91□□□□□ -0.82
PTPN20-208ENST00000395727 HECW2Q9P2P5 1572 aa9.91□□□□□ -0.82
PTPN20-208ENST00000395727 PTPRMP28827 1452 aa9.91□□□□□ -0.82
PTPN20-208ENST00000395727 YEATS2Q9ULM3 1422 aa9.9□□□□□ -0.82
PTPN20-208ENST00000395727 MADDQ8WXG6 1647 aa9.9□□□□□ -0.82
PTPN20-208ENST00000395727 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
PTPN20-208ENST00000395727 C3orf67Q6ZVT6 689 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms