RNA–Protein interactions for RNA: ENST00000395309.7

KTN1-203, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KTN1, Length 4,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-203ENST00000395309 MDM2Q00987 491 aaPredicted RBP3.69□□□□□ -1.82
KTN1-203ENST00000395309 BEGAINQ9BUH8 593 aa3.69□□□□□ -1.82
KTN1-203ENST00000395309 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.69□□□□□ -1.82
KTN1-203ENST00000395309 TMEM106CQ9BVX2 250 aa3.69□□□□□ -1.82
KTN1-203ENST00000395309 CLCN1P35523 988 aa3.69□□□□□ -1.82
KTN1-203ENST00000395309 PLPP6Q8IY26 295 aa3.69□□□□□ -1.82
KTN1-203ENST00000395309 SP7Q8TDD2 431 aaPredicted RBP3.69□□□□□ -1.82
KTN1-203ENST00000395309 PHOX2BQ99453 314 aa3.69□□□□□ -1.82
KTN1-203ENST00000395309 TMC2Q8TDI7 906 aa3.68□□□□□ -1.82
KTN1-203ENST00000395309 GPCPD1Q9NPB8 672 aa3.68□□□□□ -1.82
KTN1-203ENST00000395309 FBXO31Q5XUX0 539 aaPredicted RBP3.68□□□□□ -1.82
KTN1-203ENST00000395309 CALR3Q96L12 384 aaKnown RBP3.68□□□□□ -1.82
KTN1-203ENST00000395309 GDPD2Q9HCC8 539 aa3.68□□□□□ -1.82
KTN1-203ENST00000395309 PTGER2P43116 358 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 TBC1D12O60347 775 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 BANK1Q8NDB2 785 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 PRKAR2AP13861 404 aaKnown RBP3.67□□□□□ -1.82
KTN1-203ENST00000395309 RFC5P40937 340 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 PDE4CQ08493 712 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 MYSM1Q5VVJ2 828 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 ILDR1Q86SU0 546 aaPredicted RBP3.67□□□□□ -1.82
KTN1-203ENST00000395309 POM121CA8CG34 1229 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 DPY19L2Q6NUT2 758 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 UPF1Q92900 1129 aaKnown RBP eCLIP3.67□□□□□ -1.82
KTN1-203ENST00000395309 TRPC6Q9Y210 931 aa3.67□□□□□ -1.82
KTN1-203ENST00000395309 GLMNQ92990 594 aa3.66□□□□□ -1.82
KTN1-203ENST00000395309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.66□□□□□ -1.826e-10■■■■■ 32.9
KTN1-203ENST00000395309 PATL2C9JE40 543 aaKnown RBP3.66□□□□□ -1.82
KTN1-203ENST00000395309 BRD1O95696 1058 aa3.66□□□□□ -1.82
KTN1-203ENST00000395309 KCNA1Q09470 495 aa3.66□□□□□ -1.82
KTN1-203ENST00000395309 CARNS1A5YM72 827 aa3.66□□□□□ -1.82
KTN1-203ENST00000395309 MICALL2Q8IY33 904 aa3.66□□□□□ -1.82
KTN1-203ENST00000395309 C2orf72A6NCS6 295 aa3.65□□□□□ -1.82
KTN1-203ENST00000395309 CLK2P49760 499 aaKnown RBP3.65□□□□□ -1.82
KTN1-203ENST00000395309 MTMR14Q8NCE2 650 aa3.65□□□□□ -1.82
KTN1-203ENST00000395309 FAM217BQ9NTX9 383 aaPredicted RBP3.65□□□□□ -1.82
KTN1-203ENST00000395309 NLRP7Q8WX94 980 aa3.65□□□□□ -1.83
KTN1-203ENST00000395309 NPDC1Q9NQX5 325 aaPredicted RBP3.65□□□□□ -1.83
KTN1-203ENST00000395309 ABL2P42684 1182 aa3.65□□□□□ -1.83
KTN1-203ENST00000395309 PHF12Q96QT6 1004 aa3.65□□□□□ -1.83
KTN1-203ENST00000395309 CDHR5Q9HBB8 845 aa3.65□□□□□ -1.83
KTN1-203ENST00000395309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.64□□□□□ -1.83
KTN1-203ENST00000395309 PBXIP1Q96AQ6 731 aa3.64□□□□□ -1.83
KTN1-203ENST00000395309 RFX1P22670 979 aa3.64□□□□□ -1.83
KTN1-203ENST00000395309 CCDC27Q2M243 656 aa3.64□□□□□ -1.83
KTN1-203ENST00000395309 TMEM259Q4ZIN3 620 aa3.64□□□□□ -1.83
KTN1-203ENST00000395309 AMOTL2Q9Y2J4 779 aa3.64□□□□□ -1.83
KTN1-203ENST00000395309 KIF3CO14782 793 aa3.64□□□□□ -1.83
KTN1-203ENST00000395309 FAM161AQ3B820 660 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 WWC1Q8IX03 1113 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 USP35Q9P2H5 1018 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 TBC1D2Q9BYX2 928 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 ZRANB1Q9UGI0 708 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 LIMD1Q9UGP4 676 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 TBC1D2BQ9UPU7 963 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 IVNS1ABPQ9Y6Y0 642 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 USTQ9Y2C2 406 aa3.63□□□□□ -1.83
KTN1-203ENST00000395309 PPP2R2DQ66LE6 453 aa3.62□□□□□ -1.83
KTN1-203ENST00000395309 EVI5O60447 810 aa3.62□□□□□ -1.83
KTN1-203ENST00000395309 CSB-PGBD3P0DP91 1061 aa3.62□□□□□ -1.83
KTN1-203ENST00000395309 SRPK2P78362 688 aaKnown RBP3.62□□□□□ -1.83
KTN1-203ENST00000395309 ADAMTS19Q8TE59 1207 aa3.62□□□□□ -1.83
KTN1-203ENST00000395309 CFAP70Q5T0N1 1121 aa3.61□□□□□ -1.83
KTN1-203ENST00000395309 HDGFL1Q5TGJ6 251 aa3.61□□□□□ -1.83
KTN1-203ENST00000395309 SND1Q7KZF4 910 aaKnown RBP eCLIP3.61□□□□□ -1.83
KTN1-203ENST00000395309 UNCXA6NJT0 531 aa3.61□□□□□ -1.83
KTN1-203ENST00000395309 METTL3Q86U44 580 aaKnown RBP3.61□□□□□ -1.83
KTN1-203ENST00000395309 HMGB1P09429 215 aaKnown RBP3.61□□□□□ -1.83
KTN1-203ENST00000395309 HSP90B1P14625 803 aaKnown RBP3.61□□□□□ -1.83
KTN1-203ENST00000395309 MS4A3Q96HJ5 214 aa3.61□□□□□ -1.83
KTN1-203ENST00000395309 MYT1LQ9UL68 1186 aa3.61□□□□□ -1.83
KTN1-203ENST00000395309 TTLL13PA6NNM8 815 aa3.6□□□□□ -1.83
KTN1-203ENST00000395309 EN1Q05925 392 aaPredicted RBP3.6□□□□□ -1.83
KTN1-203ENST00000395309 RIC3Q7Z5B4 369 aa3.6□□□□□ -1.83
KTN1-203ENST00000395309 PUS7Q96PZ0 661 aaKnown RBP3.6□□□□□ -1.83
KTN1-203ENST00000395309 PRM3Q9NNZ6 103 aa3.6□□□□□ -1.83
KTN1-203ENST00000395309 MAP3K7O43318 606 aa3.6□□□□□ -1.83
KTN1-203ENST00000395309 CDK11BP21127 795 aaKnown RBP3.6□□□□□ -1.83
KTN1-203ENST00000395309 FXR2P51116 673 aaKnown RBP eCLIP3.6□□□□□ -1.833e-7■■□□□ 14.2
KTN1-203ENST00000395309 TMEM121BQ9BXQ6 578 aaPredicted RBP3.6□□□□□ -1.83
KTN1-203ENST00000395309 CDK11AQ9UQ88 783 aaPredicted RBP3.6□□□□□ -1.83
KTN1-203ENST00000395309 TSR1Q2NL82 804 aaKnown RBP3.59□□□□□ -1.83
KTN1-203ENST00000395309 RBM33Q96EV2 1170 aaKnown RBP3.59□□□□□ -1.83
KTN1-203ENST00000395309 DIXDC1Q155Q3 683 aa3.59□□□□□ -1.83
KTN1-203ENST00000395309 CSPP1Q1MSJ5 1256 aa3.59□□□□□ -1.83
KTN1-203ENST00000395309 PDCD7Q8N8D1 485 aaKnown RBP3.59□□□□□ -1.83
KTN1-203ENST00000395309 VRTNQ9H8Y1 702 aa3.59□□□□□ -1.83
KTN1-203ENST00000395309 AP1G2O75843 785 aa3.59□□□□□ -1.84
KTN1-203ENST00000395309 OATP04181 439 aa3.59□□□□□ -1.84
KTN1-203ENST00000395309 PXYLP1Q8TE99 480 aa3.59□□□□□ -1.84
KTN1-203ENST00000395309 PPP1R12CQ9BZL4 782 aa3.59□□□□□ -1.84
KTN1-203ENST00000395309 SOCS7O14512 581 aa3.58□□□□□ -1.84
KTN1-203ENST00000395309 CD44P16070 742 aaKnown RBP3.58□□□□□ -1.84
KTN1-203ENST00000395309 QPCTQ16769 361 aa3.58□□□□□ -1.84
KTN1-203ENST00000395309 SPIRE2Q8WWL2 714 aa3.58□□□□□ -1.84
KTN1-203ENST00000395309 TIE1P35590 1138 aa3.58□□□□□ -1.84
KTN1-203ENST00000395309 TRIM35Q9UPQ4 493 aa3.58□□□□□ -1.84
KTN1-203ENST00000395309 BOLA1Q9Y3E2 137 aa3.58□□□□□ -1.84
KTN1-203ENST00000395309 TMEM88BA6NKF7 163 aa3.58□□□□□ -1.84
KTN1-203ENST00000395309 RSPH4AQ5TD94 716 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms