RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TSPY4P0CV99 314 aa21.34■■□□□ 1.01
PTBP1-204ENST00000394601 TSPY10P0CW01 314 aa21.34■■□□□ 1.01
PTBP1-204ENST00000394601 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.34■■□□□ 1.01
PTBP1-204ENST00000394601 PLA2R1Q13018 1463 aa21.34■■□□□ 1.01
PTBP1-204ENST00000394601 E9PCH4 1651 aa21.32■■□□□ 1
PTBP1-204ENST00000394601 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
PTBP1-204ENST00000394601 TRPM1Q7Z4N2 1603 aa21.31■■□□□ 1
PTBP1-204ENST00000394601 IQGAP3Q86VI3 1631 aa21.31■■□□□ 1
PTBP1-204ENST00000394601 ARID4BQ4LE39 1312 aaPredicted RBP21.3■■□□□ 1
PTBP1-204ENST00000394601 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
PTBP1-204ENST00000394601 SENP3-EIF4A1A0A087X0R7 540 aa21.29■■□□□ 1
PTBP1-204ENST00000394601 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
PTBP1-204ENST00000394601 SALL2Q9Y467 1007 aaPredicted RBP21.29■■□□□ 1
PTBP1-204ENST00000394601 RSPH4AQ5TD94 716 aa21.28■■□□□ 1
PTBP1-204ENST00000394601 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
PTBP1-204ENST00000394601 ZBED9Q6R2W3 1325 aa21.25■□□□□ 0.99
PTBP1-204ENST00000394601 MRS2Q9HD23 443 aa21.25■□□□□ 0.99
PTBP1-204ENST00000394601 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
PTBP1-204ENST00000394601 PRAG1Q86YV5 1406 aa21.23■□□□□ 0.99
PTBP1-204ENST00000394601 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
PTBP1-204ENST00000394601 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
PTBP1-204ENST00000394601 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
PTBP1-204ENST00000394601 ATP10AO60312 1499 aa21.21■□□□□ 0.99
PTBP1-204ENST00000394601 PLCH2O75038 1416 aa21.2■□□□□ 0.98
PTBP1-204ENST00000394601 A2MP01023 1474 aa21.2■□□□□ 0.98
PTBP1-204ENST00000394601 LAMC1P11047 1609 aa21.2■□□□□ 0.98
PTBP1-204ENST00000394601 B4GALNT3Q6L9W6 998 aa21.2■□□□□ 0.98
PTBP1-204ENST00000394601 DUOX2Q9NRD8 1548 aa21.2■□□□□ 0.98
PTBP1-204ENST00000394601 ABCC1P33527 1531 aa21.2■□□□□ 0.98
PTBP1-204ENST00000394601 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
PTBP1-204ENST00000394601 DCAF11Q8TEB1 546 aa21.18■□□□□ 0.98
PTBP1-204ENST00000394601 ST20-MTHFSA0A0A6YYL1 179 aa21.18■□□□□ 0.98
PTBP1-204ENST00000394601 ROCK2O75116 1388 aaKnown RBP21.17■□□□□ 0.98
PTBP1-204ENST00000394601 GPRASP1Q5JY77 1395 aa21.17■□□□□ 0.98
PTBP1-204ENST00000394601 ERBINQ96RT1 1412 aa21.16■□□□□ 0.98
PTBP1-204ENST00000394601 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
PTBP1-204ENST00000394601 CCDC144AA2RUR9 1427 aa21.15■□□□□ 0.98
PTBP1-204ENST00000394601 KDM2AQ9Y2K7 1162 aa21.15■□□□□ 0.98
PTBP1-204ENST00000394601 TRAPPC8Q9Y2L5 1435 aa21.12■□□□□ 0.97
PTBP1-204ENST00000394601 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
PTBP1-204ENST00000394601 IL27Q8NEV9 243 aa21.12■□□□□ 0.97
PTBP1-204ENST00000394601 RNF17Q9BXT8 1623 aaKnown RBP21.11■□□□□ 0.97
PTBP1-204ENST00000394601 EIF5BO60841 1220 aaKnown RBP21.11■□□□□ 0.97
PTBP1-204ENST00000394601 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
PTBP1-204ENST00000394601 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
PTBP1-204ENST00000394601 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
PTBP1-204ENST00000394601 LRPPRCP42704 1394 aaKnown RBP21.09■□□□□ 0.97
PTBP1-204ENST00000394601 NBPF1Q3BBV0 1214 aa21.09■□□□□ 0.97
PTBP1-204ENST00000394601 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
PTBP1-204ENST00000394601 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
PTBP1-204ENST00000394601 DEPDC5O75140 1603 aa21.09■□□□□ 0.97
PTBP1-204ENST00000394601 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.96
PTBP1-204ENST00000394601 ZFYVE16Q7Z3T8 1539 aa21.08■□□□□ 0.96
PTBP1-204ENST00000394601 EIF2AK4Q9P2K8 1649 aaKnown RBP21.06■□□□□ 0.96
PTBP1-204ENST00000394601 COL17A1Q9UMD9 1497 aaPredicted RBP21.06■□□□□ 0.96
PTBP1-204ENST00000394601 TESK2Q96S53 571 aa21.05■□□□□ 0.96
PTBP1-204ENST00000394601 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
PTBP1-204ENST00000394601 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
PTBP1-204ENST00000394601 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
PTBP1-204ENST00000394601 PER1O15534 1290 aaPredicted RBP21.03■□□□□ 0.96
PTBP1-204ENST00000394601 KTN1Q86UP2 1357 aaKnown RBP21.03■□□□□ 0.96
PTBP1-204ENST00000394601 MADDQ8WXG6 1647 aa21.02■□□□□ 0.96
PTBP1-204ENST00000394601 RTEL1-TNFRSF6BF6WH68 1400 aa21.02■□□□□ 0.96
PTBP1-204ENST00000394601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.961e-7■■□□□ 14.5
PTBP1-204ENST00000394601 FANCIQ9NVI1 1328 aa21.02■□□□□ 0.96
PTBP1-204ENST00000394601 PARD3Q8TEW0 1356 aa21.02■□□□□ 0.95
PTBP1-204ENST00000394601 CEP152O94986 1710 aa21.01■□□□□ 0.95
PTBP1-204ENST00000394601 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
PTBP1-204ENST00000394601 INO80Q9ULG1 1556 aaPredicted RBP21.01■□□□□ 0.95
PTBP1-204ENST00000394601 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
PTBP1-204ENST00000394601 DISP3Q9P2K9 1392 aa21.01■□□□□ 0.95
PTBP1-204ENST00000394601 RGL3Q3MIN7 710 aa21■□□□□ 0.95
PTBP1-204ENST00000394601 BRD4O60885 1362 aaPredicted RBP21■□□□□ 0.95
PTBP1-204ENST00000394601 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
PTBP1-204ENST00000394601 TRPM2O94759 1503 aa21■□□□□ 0.95
PTBP1-204ENST00000394601 SPHKAPQ2M3C7 1700 aa20.99■□□□□ 0.95
PTBP1-204ENST00000394601 IQGAP1P46940 1657 aa20.99■□□□□ 0.95
PTBP1-204ENST00000394601 PPP4R2Q9NY27 417 aa20.99■□□□□ 0.95
PTBP1-204ENST00000394601 PTPRTO14522 1441 aa20.98■□□□□ 0.95
PTBP1-204ENST00000394601 MYBBP1AQ9BQG0 1328 aaKnown RBP20.98■□□□□ 0.95
PTBP1-204ENST00000394601 CLTCL1P53675 1640 aa20.97■□□□□ 0.95
PTBP1-204ENST00000394601 RALBP1Q15311 655 aa20.96■□□□□ 0.95
PTBP1-204ENST00000394601 MROH1Q8NDA8 1641 aa20.95■□□□□ 0.94
PTBP1-204ENST00000394601 NUDCQ9Y266 331 aa20.95■□□□□ 0.94
PTBP1-204ENST00000394601 WDR7Q9Y4E6 1490 aa20.95■□□□□ 0.94
PTBP1-204ENST00000394601 TET3O43151 1660 aa20.94■□□□□ 0.94
PTBP1-204ENST00000394601 LAS1LQ9Y4W2 734 aaKnown RBP20.94■□□□□ 0.94
PTBP1-204ENST00000394601 AFAP1Q8N556 730 aa20.93■□□□□ 0.94
PTBP1-204ENST00000394601 ATP7AQ04656 1500 aa20.91■□□□□ 0.94
PTBP1-204ENST00000394601 TMC1Q8TDI8 760 aa20.91■□□□□ 0.94
PTBP1-204ENST00000394601 NEURL4Q96JN8 1562 aa20.89■□□□□ 0.94
PTBP1-204ENST00000394601 SPAG9O60271 1321 aaKnown RBP20.89■□□□□ 0.93
PTBP1-204ENST00000394601 FANCAO15360 1455 aa20.88■□□□□ 0.93
PTBP1-204ENST00000394601 ZBTB47Q9UFB7 747 aaPredicted RBP20.86■□□□□ 0.93
PTBP1-204ENST00000394601 MYOM1P52179 1685 aa20.85■□□□□ 0.93
PTBP1-204ENST00000394601 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
PTBP1-204ENST00000394601 SCAPERQ9BY12 1400 aa20.85■□□□□ 0.93
PTBP1-204ENST00000394601 KIAA1210Q9ULL0 1709 aa20.85■□□□□ 0.93
PTBP1-204ENST00000394601 ZMYM4Q5VZL5 1548 aa20.85■□□□□ 0.93
PTBP1-204ENST00000394601 ANP32AP39687 249 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms