RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	MIER1	Q8N108	512 aa		13.13	□□□□□ -0.31
MITF-205	ENST00000394348	ERBIN	Q96RT1	1412 aa		13.13	□□□□□ -0.31
MITF-205	ENST00000394348	MAGI2	Q86UL8	1455 aa		13.12	□□□□□ -0.31
MITF-205	ENST00000394348	OSCAR	Q8IYS5	282 aa		13.12	□□□□□ -0.31
MITF-205	ENST00000394348	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.12	□□□□□ -0.31
MITF-205	ENST00000394348	ARHGEF12	Q9NZN5	1544 aa		13.11	□□□□□ -0.31
MITF-205	ENST00000394348	IQGAP3	Q86VI3	1631 aa		13.1	□□□□□ -0.31
MITF-205	ENST00000394348	NUP155	O75694	1391 aa		13.09	□□□□□ -0.31
MITF-205	ENST00000394348	FAM135A	Q9P2D6	1515 aa		13.09	□□□□□ -0.31
MITF-205	ENST00000394348	POLA2	Q14181	598 aa		13.09	□□□□□ -0.31
MITF-205	ENST00000394348	CFAP74	Q9C0B2	1584 aa		13.07	□□□□□ -0.32
MITF-205	ENST00000394348	L3MBTL2	Q969R5	705 aa		13.07	□□□□□ -0.32
MITF-205	ENST00000394348	ZFYVE16	Q7Z3T8	1539 aa		13.07	□□□□□ -0.32
MITF-205	ENST00000394348	UHRF1BP1	Q6BDS2	1440 aa		13.06	□□□□□ -0.32
MITF-205	ENST00000394348	ASXL2	Q76L83	1435 aa		13.06	□□□□□ -0.32
MITF-205	ENST00000394348	PKD2	Q13563	968 aa		13.06	□□□□□ -0.32
MITF-205	ENST00000394348	INO80	Q9ULG1	1556 aa	Predicted RBP	13.06	□□□□□ -0.32
MITF-205	ENST00000394348	KCNH8	Q96L42	1107 aa		13.05	□□□□□ -0.32
MITF-205	ENST00000394348	FANCA	O15360	1455 aa		13.04	□□□□□ -0.32
MITF-205	ENST00000394348	ATP10A	O60312	1499 aa		13.04	□□□□□ -0.32
MITF-205	ENST00000394348	TRAPPC8	Q9Y2L5	1435 aa		13.04	□□□□□ -0.32
MITF-205	ENST00000394348	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.03	□□□□□ -0.32
MITF-205	ENST00000394348	POLR1A	O95602	1720 aa	Predicted RBP	13.03	□□□□□ -0.32
MITF-205	ENST00000394348	DEPDC5	O75140	1603 aa		13.02	□□□□□ -0.32
MITF-205	ENST00000394348	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.01	□□□□□ -0.33
MITF-205	ENST00000394348	RALGAPB	Q86X10	1494 aa		13.01	□□□□□ -0.33
MITF-205	ENST00000394348	ATP7A	Q04656	1500 aa		13.01	□□□□□ -0.33
MITF-205	ENST00000394348	ADGRL1	O94910	1474 aa		13	□□□□□ -0.33
MITF-205	ENST00000394348	SPATA31E1	Q6ZUB1	1445 aa		13	□□□□□ -0.33
MITF-205	ENST00000394348	SPAG9	O60271	1321 aa	Known RBP	13	□□□□□ -0.33
MITF-205	ENST00000394348	NPM1	P06748	294 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
MITF-205	ENST00000394348	VWDE	Q8N2E2	1590 aa		12.98	□□□□□ -0.33
MITF-205	ENST00000394348	HSPA5	P11021	654 aa	Known RBP	12.97	□□□□□ -0.33
MITF-205	ENST00000394348	ZNF518A	Q6AHZ1	1483 aa		12.97	□□□□□ -0.33
MITF-205	ENST00000394348	CCDC144A	A2RUR9	1427 aa		12.96	□□□□□ -0.33
MITF-205	ENST00000394348	KDM5C	P41229	1560 aa		12.96	□□□□□ -0.33
MITF-205	ENST00000394348	CCER2	I3L3R5	266 aa		12.96	□□□□□ -0.33
MITF-205	ENST00000394348	DDX10	Q13206	875 aa	Known RBP	12.96	□□□□□ -0.33
MITF-205	ENST00000394348	NBPF8	Q3BBV2	869 aa		12.96	□□□□□ -0.33
MITF-205	ENST00000394348	TET3	O43151	1660 aa		12.96	□□□□□ -0.34
MITF-205	ENST00000394348	PRDM15	P57071	1507 aa	Predicted RBP	12.95	□□□□□ -0.34
MITF-205	ENST00000394348	PLA2R1	Q13018	1463 aa		12.95	□□□□□ -0.34
MITF-205	ENST00000394348	NEO1	Q92859	1461 aa		12.95	□□□□□ -0.34
MITF-205	ENST00000394348	SCAPER	Q9BY12	1400 aa		12.95	□□□□□ -0.34
MITF-205	ENST00000394348	LAMC1	P11047	1609 aa		12.95	□□□□□ -0.34
MITF-205	ENST00000394348	NEURL4	Q96JN8	1562 aa		12.94	□□□□□ -0.34
MITF-205	ENST00000394348	BCORL1	Q5H9F3	1711 aa		12.93	□□□□□ -0.34
MITF-205	ENST00000394348	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.93	□□□□□ -0.34
MITF-205	ENST00000394348	POGZ	Q7Z3K3	1410 aa		12.93	□□□□□ -0.34
MITF-205	ENST00000394348	DHX29	Q7Z478	1369 aa	Known RBP	12.93	□□□□□ -0.34
MITF-205	ENST00000394348	TRPM2	O94759	1503 aa		12.93	□□□□□ -0.34
MITF-205	ENST00000394348	MLH3	Q9UHC1	1453 aa		12.92	□□□□□ -0.34
MITF-205	ENST00000394348	RNF17	Q9BXT8	1623 aa	Known RBP	12.92	□□□□□ -0.34
MITF-205	ENST00000394348	KIDINS220	Q9ULH0	1771 aa		12.92	□□□□□ -0.34
MITF-205	ENST00000394348	ANP32C	O43423	234 aa		12.92	□□□□□ -0.34
MITF-205	ENST00000394348	GLI2	P10070	1586 aa		12.92	□□□□□ -0.34
MITF-205	ENST00000394348	CD109	Q6YHK3	1445 aa		12.92	□□□□□ -0.34
MITF-205	ENST00000394348	CNTLN	Q9NXG0	1405 aa		12.92	□□□□□ -0.34
MITF-205	ENST00000394348	CCDC7	Q96M83	1385 aa		12.92	□□□□□ -0.34
MITF-205	ENST00000394348	WASHC2A	Q641Q2	1341 aa		12.91	□□□□□ -0.34
MITF-205	ENST00000394348	PTPRT	O14522	1441 aa		12.91	□□□□□ -0.34
MITF-205	ENST00000394348		E9PCH4	1651 aa		12.91	□□□□□ -0.34
MITF-205	ENST00000394348	LMTK2	Q8IWU2	1503 aa		12.91	□□□□□ -0.34
MITF-205	ENST00000394348	KANK1	Q14678	1352 aa		12.91	□□□□□ -0.34
MITF-205	ENST00000394348	HECW2	Q9P2P5	1572 aa		12.9	□□□□□ -0.34
MITF-205	ENST00000394348	AFAP1	Q8N556	730 aa		12.9	□□□□□ -0.34
MITF-205	ENST00000394348	TRPM1	Q7Z4N2	1603 aa		12.9	□□□□□ -0.34
MITF-205	ENST00000394348	MROH1	Q8NDA8	1641 aa		12.9	□□□□□ -0.34
MITF-205	ENST00000394348	SPHKAP	Q2M3C7	1700 aa		12.9	□□□□□ -0.34
MITF-205	ENST00000394348	PRAG1	Q86YV5	1406 aa		12.89	□□□□□ -0.35
MITF-205	ENST00000394348	STAC3	Q96MF2	364 aa		12.89	□□□□□ -0.35
MITF-205	ENST00000394348	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.89	□□□□□ -0.35
MITF-205	ENST00000394348	USP47	Q96K76	1375 aa		12.89	□□□□□ -0.35
MITF-205	ENST00000394348	MAP3K4	Q9Y6R4	1608 aa		12.88	□□□□□ -0.35
MITF-205	ENST00000394348	CEP152	O94986	1710 aa		12.88	□□□□□ -0.35
MITF-205	ENST00000394348	GPRASP1	Q5JY77	1395 aa		12.88	□□□□□ -0.35
MITF-205	ENST00000394348	A2M	P01023	1474 aa		12.88	□□□□□ -0.35
MITF-205	ENST00000394348	YTHDC1	Q96MU7	727 aa	Known RBP	12.87	□□□□□ -0.35
MITF-205	ENST00000394348	ROCK2	O75116	1388 aa	Known RBP	12.86	□□□□□ -0.35
MITF-205	ENST00000394348	EFCAB6	Q5THR3	1501 aa		12.86	□□□□□ -0.35
MITF-205	ENST00000394348	RIMBP3C	A6NJZ7	1639 aa		12.85	□□□□□ -0.35
MITF-205	ENST00000394348	RIMBP3B	A6NNM3	1639 aa		12.85	□□□□□ -0.35
MITF-205	ENST00000394348	RIMBP3	Q9UFD9	1639 aa		12.85	□□□□□ -0.35
MITF-205	ENST00000394348	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.84	□□□□□ -0.35
MITF-205	ENST00000394348	KIF7	Q2M1P5	1343 aa		12.84	□□□□□ -0.35
MITF-205	ENST00000394348	FRMPD1	Q5SYB0	1578 aa		12.83	□□□□□ -0.36
MITF-205	ENST00000394348	CLTCL1	P53675	1640 aa		12.82	□□□□□ -0.36
MITF-205	ENST00000394348	DCAF11	Q8TEB1	546 aa		12.82	□□□□□ -0.36
MITF-205	ENST00000394348	RICTOR	Q6R327	1708 aa		12.82	□□□□□ -0.36
MITF-205	ENST00000394348	ABCA6	Q8N139	1617 aa		12.81	□□□□□ -0.36
MITF-205	ENST00000394348	CARD11	Q9BXL7	1154 aa		12.81	□□□□□ -0.36
MITF-205	ENST00000394348	KIAA1210	Q9ULL0	1709 aa		12.81	□□□□□ -0.36
MITF-205	ENST00000394348	MADD	Q8WXG6	1647 aa		12.8	□□□□□ -0.36
MITF-205	ENST00000394348	ZMYM4	Q5VZL5	1548 aa		12.8	□□□□□ -0.36
MITF-205	ENST00000394348	PPRC1	Q5VV67	1664 aa	Known RBP	12.8	□□□□□ -0.36
MITF-205	ENST00000394348	C11orf95	C9JLR9	678 aa	Predicted RBP	12.79	□□□□□ -0.36
MITF-205	ENST00000394348	KIF3B	O15066	747 aa		12.79	□□□□□ -0.36
MITF-205	ENST00000394348	ZC3H13	Q5T200	1668 aa	Known RBP	12.79	□□□□□ -0.36
MITF-205	ENST00000394348	MYOM2	P54296	1465 aa		12.78	□□□□□ -0.36
MITF-205	ENST00000394348	DIP2B	Q9P265	1576 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms