RNA–Protein interactions for RNA: ENST00000394303.7

CACNB1-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNB1, Length 3,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-202ENST00000394303 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
CACNB1-202ENST00000394303 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
CACNB1-202ENST00000394303 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
CACNB1-202ENST00000394303 DENND4BO75064 1496 aaPredicted RBP17.16■□□□□ 0.34
CACNB1-202ENST00000394303 KIF15Q9NS87 1388 aa17.15■□□□□ 0.34
CACNB1-202ENST00000394303 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
CACNB1-202ENST00000394303 CUL7Q14999 1698 aa17.15■□□□□ 0.34
CACNB1-202ENST00000394303 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
CACNB1-202ENST00000394303 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNB1-202ENST00000394303 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
CACNB1-202ENST00000394303 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
CACNB1-202ENST00000394303 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
CACNB1-202ENST00000394303 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
CACNB1-202ENST00000394303 SLC4A3P48751 1232 aa17.13■□□□□ 0.33
CACNB1-202ENST00000394303 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
CACNB1-202ENST00000394303 RALBP1Q15311 655 aa17.13■□□□□ 0.33
CACNB1-202ENST00000394303 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
CACNB1-202ENST00000394303 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
CACNB1-202ENST00000394303 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
CACNB1-202ENST00000394303 BRPF3Q9ULD4 1205 aa17.11■□□□□ 0.33
CACNB1-202ENST00000394303 TMEM132EQ6IEE7 984 aa17.11■□□□□ 0.33
CACNB1-202ENST00000394303 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
CACNB1-202ENST00000394303 CTTNBP2Q8WZ74 1663 aa17.11■□□□□ 0.33
CACNB1-202ENST00000394303 KDM6BO15054 1643 aa17.1■□□□□ 0.33
CACNB1-202ENST00000394303 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
CACNB1-202ENST00000394303 LAMC3Q9Y6N6 1575 aa17.1■□□□□ 0.33
CACNB1-202ENST00000394303 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
CACNB1-202ENST00000394303 ANKRD30BQ9BXX2 1392 aa17.09■□□□□ 0.33
CACNB1-202ENST00000394303 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
CACNB1-202ENST00000394303 APAF1O14727 1248 aa17.09■□□□□ 0.33
CACNB1-202ENST00000394303 RPRD2Q5VT52 1461 aaKnown RBP17.09■□□□□ 0.33
CACNB1-202ENST00000394303 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
CACNB1-202ENST00000394303 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
CACNB1-202ENST00000394303 KANK1Q14678 1352 aa17.09■□□□□ 0.33
CACNB1-202ENST00000394303 MS4A1P11836 297 aa17.08■□□□□ 0.33
CACNB1-202ENST00000394303 LMOD2Q6P5Q4 547 aa17.08■□□□□ 0.33
CACNB1-202ENST00000394303 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.32
CACNB1-202ENST00000394303 MYBBP1AQ9BQG0 1328 aaKnown RBP17.08■□□□□ 0.32
CACNB1-202ENST00000394303 GSE1Q14687 1217 aa17.08■□□□□ 0.32
CACNB1-202ENST00000394303 UGGT2Q9NYU1 1516 aa17.07■□□□□ 0.32
CACNB1-202ENST00000394303 SKAP1Q86WV1 359 aa17.07■□□□□ 0.32
CACNB1-202ENST00000394303 GCC2Q8IWJ2 1684 aa17.07■□□□□ 0.32
CACNB1-202ENST00000394303 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
CACNB1-202ENST00000394303 APBB1O00213 710 aa17.06■□□□□ 0.32
CACNB1-202ENST00000394303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNB1-202ENST00000394303 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
CACNB1-202ENST00000394303 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
CACNB1-202ENST00000394303 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
CACNB1-202ENST00000394303 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
CACNB1-202ENST00000394303 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
CACNB1-202ENST00000394303 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
CACNB1-202ENST00000394303 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
CACNB1-202ENST00000394303 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
CACNB1-202ENST00000394303 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
CACNB1-202ENST00000394303 NFKBIBQ15653 356 aa17.02■□□□□ 0.32
CACNB1-202ENST00000394303 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
CACNB1-202ENST00000394303 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.31
CACNB1-202ENST00000394303 LRRIQ1Q96JM4 1722 aa17.01■□□□□ 0.31
CACNB1-202ENST00000394303 RSPH4AQ5TD94 716 aa17■□□□□ 0.31
CACNB1-202ENST00000394303 SLKQ9H2G2 1235 aaPredicted RBP17■□□□□ 0.31
CACNB1-202ENST00000394303 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
CACNB1-202ENST00000394303 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
CACNB1-202ENST00000394303 MINK1Q8N4C8 1332 aaPredicted RBP16.99■□□□□ 0.31
CACNB1-202ENST00000394303 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
CACNB1-202ENST00000394303 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
CACNB1-202ENST00000394303 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
CACNB1-202ENST00000394303 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
CACNB1-202ENST00000394303 A0A0G2JS52 829 aa16.97■□□□□ 0.31
CACNB1-202ENST00000394303 SAMD9Q5K651 1589 aa16.97■□□□□ 0.31
CACNB1-202ENST00000394303 BRD4O60885 1362 aaPredicted RBP16.96■□□□□ 0.31
CACNB1-202ENST00000394303 DAPK1P53355 1430 aa16.96■□□□□ 0.31
CACNB1-202ENST00000394303 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
CACNB1-202ENST00000394303 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
CACNB1-202ENST00000394303 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
CACNB1-202ENST00000394303 LRPPRCP42704 1394 aaKnown RBP16.94■□□□□ 0.3
CACNB1-202ENST00000394303 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
CACNB1-202ENST00000394303 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
CACNB1-202ENST00000394303 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
CACNB1-202ENST00000394303 BCORL1Q5H9F3 1711 aa16.92■□□□□ 0.3
CACNB1-202ENST00000394303 TROQ12816 1431 aaPredicted RBP16.91■□□□□ 0.3
CACNB1-202ENST00000394303 C9orf84Q5VXU9 1444 aa16.91■□□□□ 0.3
CACNB1-202ENST00000394303 ABCC5O15440 1437 aa16.91■□□□□ 0.3
CACNB1-202ENST00000394303 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
CACNB1-202ENST00000394303 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
CACNB1-202ENST00000394303 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
CACNB1-202ENST00000394303 ROCK1Q13464 1354 aa16.9■□□□□ 0.3
CACNB1-202ENST00000394303 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
CACNB1-202ENST00000394303 SMC4Q9NTJ3 1288 aa16.9■□□□□ 0.3
CACNB1-202ENST00000394303 RAPGEF3O95398 923 aa16.89■□□□□ 0.29
CACNB1-202ENST00000394303 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
CACNB1-202ENST00000394303 KIAA1107Q9UPP5 1409 aa16.88■□□□□ 0.29
CACNB1-202ENST00000394303 IQGAP2Q13576 1575 aa16.87■□□□□ 0.29
CACNB1-202ENST00000394303 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
CACNB1-202ENST00000394303 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
CACNB1-202ENST00000394303 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
CACNB1-202ENST00000394303 BECN1Q14457 450 aa16.86■□□□□ 0.29
CACNB1-202ENST00000394303 GZF1Q9H116 711 aaPredicted RBP16.86■□□□□ 0.29
CACNB1-202ENST00000394303 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
CACNB1-202ENST00000394303 NCLP19338 710 aaKnown RBP16.85■□□□□ 0.29
CACNB1-202ENST00000394303 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms