RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 CLUAP1Q96AJ1 413 aa7.03□□□□□ -1.28
GAPVD1-206ENST00000394104 ST18O60284 1047 aa7.03□□□□□ -1.28
GAPVD1-206ENST00000394104 RRP12Q5JTH9 1297 aaKnown RBP7.03□□□□□ -1.28
GAPVD1-206ENST00000394104 HMMRO75330 724 aa7.03□□□□□ -1.28
GAPVD1-206ENST00000394104 MCTP1Q6DN14 999 aa7.03□□□□□ -1.28
GAPVD1-206ENST00000394104 TPM1P09493 284 aa7.02□□□□□ -1.28
GAPVD1-206ENST00000394104 GPS2Q13227 327 aa7.02□□□□□ -1.28
GAPVD1-206ENST00000394104 FOXD1Q16676 465 aa7.02□□□□□ -1.28
GAPVD1-206ENST00000394104 LTV1Q96GA3 475 aaPredicted RBP7.02□□□□□ -1.28
GAPVD1-206ENST00000394104 IPO9Q96P70 1041 aaKnown RBP7.02□□□□□ -1.28
GAPVD1-206ENST00000394104 AKAP17AQ02040 695 aaKnown RBP7.02□□□□□ -1.29
GAPVD1-206ENST00000394104 VSIG10Q8N0Z9 540 aa7.02□□□□□ -1.29
GAPVD1-206ENST00000394104 ROCK2O75116 1388 aaKnown RBP7.02□□□□□ -1.29
GAPVD1-206ENST00000394104 FBXW7Q969H0 707 aa7.02□□□□□ -1.29
GAPVD1-206ENST00000394104 CCNB3Q8WWL7 1395 aa7.02□□□□□ -1.29
GAPVD1-206ENST00000394104 GTF2E1P29083 439 aaPredicted RBP7.02□□□□□ -1.29
GAPVD1-206ENST00000394104 GGT6Q6P531 493 aa7.01□□□□□ -1.29
GAPVD1-206ENST00000394104 CTDP1Q9Y5B0 961 aaPredicted RBP7.01□□□□□ -1.29
GAPVD1-206ENST00000394104 BECN2A8MW95 431 aa7.01□□□□□ -1.29
GAPVD1-206ENST00000394104 MYO15BQ96JP2 1530 aa7.01□□□□□ -1.29
GAPVD1-206ENST00000394104 DDX11L8A8MPP1 907 aa7.01□□□□□ -1.29
GAPVD1-206ENST00000394104 TRIM34Q9BYJ4 488 aa7.01□□□□□ -1.29
GAPVD1-206ENST00000394104 SLC4A3P48751 1232 aa7.01□□□□□ -1.29
GAPVD1-206ENST00000394104 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.01□□□□□ -1.296e-7■■■■■ 57.6
GAPVD1-206ENST00000394104 NUTM2DQ5VT03 806 aaPredicted RBP7□□□□□ -1.29
GAPVD1-206ENST00000394104 FOSBP53539 338 aa7□□□□□ -1.29
GAPVD1-206ENST00000394104 KIF3AQ9Y496 699 aa7□□□□□ -1.29
GAPVD1-206ENST00000394104 CCER2I3L3R5 266 aa6.99□□□□□ -1.29
GAPVD1-206ENST00000394104 MSH5O43196 834 aa6.99□□□□□ -1.29
GAPVD1-206ENST00000394104 DDX49Q9Y6V7 483 aaKnown RBP6.99□□□□□ -1.29
GAPVD1-206ENST00000394104 NAP1L1P55209 391 aaKnown RBP6.99□□□□□ -1.29
GAPVD1-206ENST00000394104 TEX35Q5T0J7 233 aa6.99□□□□□ -1.29
GAPVD1-206ENST00000394104 SYNE3Q6ZMZ3 975 aa6.99□□□□□ -1.29
GAPVD1-206ENST00000394104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.99□□□□□ -1.29
GAPVD1-206ENST00000394104 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 NGEFQ8N5V2 710 aa6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 RSPH6AQ9H0K4 717 aa6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 AMPHP49418 695 aa6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 ANKRD45Q5TZF3 282 aa6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 CENPJQ9HC77 1338 aaPredicted RBP6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 TRIM29Q14134 588 aa6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 SAMD1Q6SPF0 538 aaPredicted RBP6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 TIMELESSQ9UNS1 1208 aa6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 RRP7AQ9Y3A4 280 aaKnown RBP6.98□□□□□ -1.29
GAPVD1-206ENST00000394104 NUTM2FA1L443 756 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 DHX16O60231 1041 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 SKIDA1Q1XH10 827 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 RUFY1Q96T51 708 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 ANO2Q9NQ90 1003 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 NOL10Q9BSC4 688 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 RALBP1Q15311 655 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 AMOTL1Q8IY63 956 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 AK7Q96M32 723 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 HDAC5Q9UQL6 1122 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
GAPVD1-206ENST00000394104 PKD2Q13563 968 aa6.96□□□□□ -1.29
GAPVD1-206ENST00000394104 NGDNQ8NEJ9 315 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-206ENST00000394104 MAP7D2Q96T17 732 aa6.96□□□□□ -1.29
GAPVD1-206ENST00000394104 APPP05067 770 aa6.96□□□□□ -1.29
GAPVD1-206ENST00000394104 CCDC47Q96A33 483 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-206ENST00000394104 TSHZ2Q9NRE2 1034 aa6.96□□□□□ -1.3
GAPVD1-206ENST00000394104 IPO7O95373 1038 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-206ENST00000394104 ODF2Q5BJF6 829 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 ANKRD20A12PQ8NF67 263 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 KDM4AO75164 1064 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 HSP90AB2PQ58FF8 381 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 CHMP4AQ9BY43 222 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 BAZ1BQ9UIG0 1483 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 NFXL1Q6ZNB6 911 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 ELL2O00472 640 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 CCDC43Q96MW1 224 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 BCL2L13Q9BXK5 485 aa6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 EIF3AQ14152 1382 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-206ENST00000394104 SKOR2Q2VWA4 1001 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 ZFYVE27Q5T4F4 411 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 NECTIN2Q92692 538 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 DIAPH3Q9NSV4 1193 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 ATP6V1DQ9Y5K8 247 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 EVA1CP58658 441 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 PLIN1O60240 522 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 LMOD3Q0VAK6 560 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 PLCD4Q9BRC7 762 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 KIF27Q86VH2 1401 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 NOM1Q5C9Z4 860 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 TTLL5Q6EMB2 1281 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 HOOK1Q9UJC3 728 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 GSE1Q14687 1217 aa6.94□□□□□ -1.3
GAPVD1-206ENST00000394104 C1orf141Q5JVX7 400 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 VPS37DQ86XT2 251 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 SETD5Q9C0A6 1442 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 CEP164Q9UPV0 1460 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 TERF2IPQ9NYB0 399 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 FYB1O15117 783 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 EIF2S2P20042 333 aaKnown RBP6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 EPS15P42566 896 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 SASS6Q6UVJ0 657 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms