RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 EFCAB2Q5VUJ9 269 aa13.14□□□□□ -0.31
PC-201ENST00000393955 USP47Q96K76 1375 aa13.14□□□□□ -0.31
PC-201ENST00000393955 KDM5CP41229 1560 aa13.14□□□□□ -0.31
PC-201ENST00000393955 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
PC-201ENST00000393955 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
PC-201ENST00000393955 ANKRD30AQ9BXX3 1397 aa13.13□□□□□ -0.31
PC-201ENST00000393955 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
PC-201ENST00000393955 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
PC-201ENST00000393955 CHD1O14646 1710 aa13.1□□□□□ -0.31
PC-201ENST00000393955 TTC37Q6PGP7 1564 aa13.1□□□□□ -0.31
PC-201ENST00000393955 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
PC-201ENST00000393955 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
PC-201ENST00000393955 STK26Q9P289 416 aa13.09□□□□□ -0.31
PC-201ENST00000393955 ST20-MTHFSA0A0A6YYL1 179 aa13.08□□□□□ -0.32
PC-201ENST00000393955 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
PC-201ENST00000393955 SPAG9O60271 1321 aaKnown RBP13.07□□□□□ -0.32
PC-201ENST00000393955 PLA2R1Q13018 1463 aa13.07□□□□□ -0.32
PC-201ENST00000393955 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
PC-201ENST00000393955 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
PC-201ENST00000393955 PPM1GO15355 546 aaPredicted RBP13.06□□□□□ -0.32
PC-201ENST00000393955 MSH5O43196 834 aa13.06□□□□□ -0.32
PC-201ENST00000393955 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
PC-201ENST00000393955 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
PC-201ENST00000393955 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
PC-201ENST00000393955 B4GALNT3Q6L9W6 998 aa13.04□□□□□ -0.32
PC-201ENST00000393955 PREX2Q70Z35 1606 aa13.04□□□□□ -0.32
PC-201ENST00000393955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.04□□□□□ -0.32
PC-201ENST00000393955 UHRF1BP1Q6BDS2 1440 aa13.04□□□□□ -0.32
PC-201ENST00000393955 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
PC-201ENST00000393955 RALGAPBQ86X10 1494 aa13.03□□□□□ -0.32
PC-201ENST00000393955 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
PC-201ENST00000393955 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.32
PC-201ENST00000393955 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.32
PC-201ENST00000393955 ARHGEF5Q12774 1597 aa13.02□□□□□ -0.33
PC-201ENST00000393955 SOX12O15370 315 aa13.01□□□□□ -0.33
PC-201ENST00000393955 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
PC-201ENST00000393955 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
PC-201ENST00000393955 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
PC-201ENST00000393955 C14orf37Q86TY3 774 aa13□□□□□ -0.33
PC-201ENST00000393955 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
PC-201ENST00000393955 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
PC-201ENST00000393955 ARHGAP5Q13017 1502 aa12.99□□□□□ -0.33
PC-201ENST00000393955 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
PC-201ENST00000393955 SHROOM2Q13796 1616 aa12.98□□□□□ -0.33
PC-201ENST00000393955 A2MP01023 1474 aa12.97□□□□□ -0.33
PC-201ENST00000393955 POGKQ9P215 609 aa12.97□□□□□ -0.33
PC-201ENST00000393955 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
PC-201ENST00000393955 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
PC-201ENST00000393955 WASHC2CQ9Y4E1 1318 aa12.96□□□□□ -0.33
PC-201ENST00000393955 E9PCH4 1651 aa12.96□□□□□ -0.33
PC-201ENST00000393955 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
PC-201ENST00000393955 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
PC-201ENST00000393955 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
PC-201ENST00000393955 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
PC-201ENST00000393955 TRAK1Q9UPV9 953 aa12.94□□□□□ -0.34
PC-201ENST00000393955 MYO5CQ9NQX4 1742 aa12.94□□□□□ -0.34
PC-201ENST00000393955 NEFMP07197 916 aa12.94□□□□□ -0.34
PC-201ENST00000393955 FAM69CQ0P6D2 419 aa12.94□□□□□ -0.34
PC-201ENST00000393955 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
PC-201ENST00000393955 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
PC-201ENST00000393955 UNC13BO14795 1591 aa12.93□□□□□ -0.34
PC-201ENST00000393955 TESK2Q96S53 571 aa12.93□□□□□ -0.34
PC-201ENST00000393955 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
PC-201ENST00000393955 KANK1Q14678 1352 aa12.92□□□□□ -0.34
PC-201ENST00000393955 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
PC-201ENST00000393955 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
PC-201ENST00000393955 PPP4R2Q9NY27 417 aa12.92□□□□□ -0.34
PC-201ENST00000393955 ABCC2Q92887 1545 aa12.92□□□□□ -0.34
PC-201ENST00000393955 RAPGEF3O95398 923 aa12.91□□□□□ -0.34
PC-201ENST00000393955 CCDC136Q96JN2 1154 aa12.91□□□□□ -0.34
PC-201ENST00000393955 TMF1P82094 1093 aa12.91□□□□□ -0.34
PC-201ENST00000393955 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
PC-201ENST00000393955 SMG6Q86US8 1419 aaKnown RBP12.9□□□□□ -0.34
PC-201ENST00000393955 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
PC-201ENST00000393955 LRPPRCP42704 1394 aaKnown RBP12.89□□□□□ -0.35
PC-201ENST00000393955 MAST1Q9Y2H9 1570 aa12.89□□□□□ -0.35
PC-201ENST00000393955 IQGAP3Q86VI3 1631 aa12.89□□□□□ -0.35
PC-201ENST00000393955 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
PC-201ENST00000393955 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
PC-201ENST00000393955 RNF123Q5XPI4 1314 aa12.87□□□□□ -0.35
PC-201ENST00000393955 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
PC-201ENST00000393955 PLXNC1O60486 1568 aa12.87□□□□□ -0.35
PC-201ENST00000393955 RSPH4AQ5TD94 716 aa12.86□□□□□ -0.35
PC-201ENST00000393955 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
PC-201ENST00000393955 MYBBP1AQ9BQG0 1328 aaKnown RBP12.85□□□□□ -0.35
PC-201ENST00000393955 PLCH2O75038 1416 aa12.85□□□□□ -0.35
PC-201ENST00000393955 TMEM132EQ6IEE7 984 aa12.85□□□□□ -0.35
PC-201ENST00000393955 PANK3Q9H999 370 aa12.85□□□□□ -0.35
PC-201ENST00000393955 LAS1LQ9Y4W2 734 aaKnown RBP12.85□□□□□ -0.35
PC-201ENST00000393955 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
PC-201ENST00000393955 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
PC-201ENST00000393955 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
PC-201ENST00000393955 ABCC1P33527 1531 aa12.84□□□□□ -0.35
PC-201ENST00000393955 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
PC-201ENST00000393955 COL17A1Q9UMD9 1497 aaPredicted RBP12.84□□□□□ -0.35
PC-201ENST00000393955 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
PC-201ENST00000393955 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
PC-201ENST00000393955 UGGT1Q9NYU2 1555 aa12.82□□□□□ -0.36
PC-201ENST00000393955 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
PC-201ENST00000393955 SCAPERQ9BY12 1400 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms