RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 CRISPLD2Q9H0B8 497 aa9.33□□□□□ -0.92
NPM1-203ENST00000393820 PDE4AP27815 886 aa9.31□□□□□ -0.92
NPM1-203ENST00000393820 IRX2Q9BZI1 471 aaPredicted RBP9.31□□□□□ -0.92
NPM1-203ENST00000393820 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
NPM1-203ENST00000393820 LMOD2Q6P5Q4 547 aa9.29□□□□□ -0.92
NPM1-203ENST00000393820 TMC2Q8TDI7 906 aa9.29□□□□□ -0.92
NPM1-203ENST00000393820 LAMC3Q9Y6N6 1575 aa9.29□□□□□ -0.92
NPM1-203ENST00000393820 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
NPM1-203ENST00000393820 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
NPM1-203ENST00000393820 ARXQ96QS3 562 aa9.29□□□□□ -0.92
NPM1-203ENST00000393820 GPHNQ9NQX3 736 aaPredicted RBP9.28□□□□□ -0.92
NPM1-203ENST00000393820 PSEN2P49810 448 aa9.27□□□□□ -0.93
NPM1-203ENST00000393820 DSG2Q14126 1118 aa9.27□□□□□ -0.93
NPM1-203ENST00000393820 IFFO2Q5TF58 517 aa9.27□□□□□ -0.93
NPM1-203ENST00000393820 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
NPM1-203ENST00000393820 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
NPM1-203ENST00000393820 NESP48681 1621 aa9.25□□□□□ -0.93
NPM1-203ENST00000393820 MFSD10Q14728 455 aa9.25□□□□□ -0.93
NPM1-203ENST00000393820 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
NPM1-203ENST00000393820 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
NPM1-203ENST00000393820 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
NPM1-203ENST00000393820 KCNH8Q96L42 1107 aa9.23□□□□□ -0.93
NPM1-203ENST00000393820 PTPN5P54829 565 aa9.22□□□□□ -0.93
NPM1-203ENST00000393820 E2F4Q16254 413 aa9.22□□□□□ -0.93
NPM1-203ENST00000393820 MROH2BQ7Z745 1585 aa9.21□□□□□ -0.93
NPM1-203ENST00000393820 THOC2Q8NI27 1593 aaKnown RBP9.21□□□□□ -0.94
NPM1-203ENST00000393820 BRPF1P55201 1214 aaPredicted RBP9.2□□□□□ -0.94
NPM1-203ENST00000393820 FOXK1P85037 733 aa9.2□□□□□ -0.94
NPM1-203ENST00000393820 PLPP6Q8IY26 295 aa9.2□□□□□ -0.94
NPM1-203ENST00000393820 PTCD2Q8WV60 388 aaKnown RBP9.2□□□□□ -0.94
NPM1-203ENST00000393820 CADPSQ9ULU8 1353 aa9.2□□□□□ -0.94
NPM1-203ENST00000393820 C14orf37Q86TY3 774 aa9.2□□□□□ -0.94
NPM1-203ENST00000393820 A0A0G2JS52 829 aa9.19□□□□□ -0.94
NPM1-203ENST00000393820 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
NPM1-203ENST00000393820 KCNK17Q96T54 332 aa9.16□□□□□ -0.94
NPM1-203ENST00000393820 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
NPM1-203ENST00000393820 ARHGEF1Q92888 912 aaKnown RBP9.16□□□□□ -0.94
NPM1-203ENST00000393820 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
NPM1-203ENST00000393820 TBC1D12O60347 775 aa9.15□□□□□ -0.95
NPM1-203ENST00000393820 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
NPM1-203ENST00000393820 UPF1Q92900 1129 aaKnown RBP eCLIP9.14□□□□□ -0.95
NPM1-203ENST00000393820 MRC2Q9UBG0 1479 aa9.14□□□□□ -0.95
NPM1-203ENST00000393820 KIF21AQ7Z4S6 1674 aa9.14□□□□□ -0.95
NPM1-203ENST00000393820 DPYSL4O14531 572 aa9.12□□□□□ -0.95
NPM1-203ENST00000393820 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
NPM1-203ENST00000393820 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
NPM1-203ENST00000393820 WDR62O43379 1518 aa9.12□□□□□ -0.95
NPM1-203ENST00000393820 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
NPM1-203ENST00000393820 GOLGA8CPA6NN73 597 aa9.1□□□□□ -0.95
NPM1-203ENST00000393820 TESPA1A2RU30 521 aaPredicted RBP9.09□□□□□ -0.95
NPM1-203ENST00000393820 SUPT5HO00267 1087 aaKnown RBP9.09□□□□□ -0.95
NPM1-203ENST00000393820 SEMA3EO15041 775 aa9.09□□□□□ -0.95
NPM1-203ENST00000393820 HOMEZQ8IX15 550 aa9.09□□□□□ -0.95
NPM1-203ENST00000393820 CFTRP13569 1480 aa9.08□□□□□ -0.96
NPM1-203ENST00000393820 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
NPM1-203ENST00000393820 WIZO95785 1651 aa9.08□□□□□ -0.96
NPM1-203ENST00000393820 NEUROD2Q15784 382 aa9.07□□□□□ -0.96
NPM1-203ENST00000393820 Q6ZNB5 142 aa9.07□□□□□ -0.96
NPM1-203ENST00000393820 WNT2BQ93097 391 aa9.07□□□□□ -0.96
NPM1-203ENST00000393820 SLC24A3Q9HC58 644 aa9.07□□□□□ -0.96
NPM1-203ENST00000393820 FANCD2Q9BXW9 1451 aa9.06□□□□□ -0.96
NPM1-203ENST00000393820 MAP3K9P80192 1104 aa9.06□□□□□ -0.96
NPM1-203ENST00000393820 OXER1Q8TDS5 423 aa9.06□□□□□ -0.96
NPM1-203ENST00000393820 BHMG1C9JSJ3 638 aaPredicted RBP9.05□□□□□ -0.96
NPM1-203ENST00000393820 MRPL50Q8N5N7 158 aaKnown RBP9.05□□□□□ -0.96
NPM1-203ENST00000393820 BCL2L12Q9HB09 334 aa9.04□□□□□ -0.96
NPM1-203ENST00000393820 ARIH1Q9Y4X5 557 aaPredicted RBP9.04□□□□□ -0.96
NPM1-203ENST00000393820 RSF1Q96T23 1441 aaPredicted RBP9.04□□□□□ -0.96
NPM1-203ENST00000393820 HRCP23327 699 aa9.03□□□□□ -0.96
NPM1-203ENST00000393820 MLLT3P42568 568 aaPredicted RBP9.03□□□□□ -0.96
NPM1-203ENST00000393820 ZNF454Q8N9F8 522 aa9.02□□□□□ -0.97
NPM1-203ENST00000393820 TOP2AP11388 1531 aaKnown RBP9.02□□□□□ -0.97
NPM1-203ENST00000393820 ZMYND10O75800 440 aa9.01□□□□□ -0.97
NPM1-203ENST00000393820 PTPREP23469 700 aa9□□□□□ -0.97
NPM1-203ENST00000393820 EVI5O60447 810 aa8.99□□□□□ -0.97
NPM1-203ENST00000393820 PDIA6Q15084 440 aa8.99□□□□□ -0.97
NPM1-203ENST00000393820 ZBED2Q9BTP6 218 aa8.99□□□□□ -0.97
NPM1-203ENST00000393820 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
NPM1-203ENST00000393820 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
NPM1-203ENST00000393820 DDX12PQ92771 950 aa8.97□□□□□ -0.97
NPM1-203ENST00000393820 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.97
NPM1-203ENST00000393820 LAPTM4AQ15012 233 aa8.96□□□□□ -0.97
NPM1-203ENST00000393820 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
NPM1-203ENST00000393820 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
NPM1-203ENST00000393820 FOSBP53539 338 aa8.95□□□□□ -0.98
NPM1-203ENST00000393820 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
NPM1-203ENST00000393820 SMYD5Q6GMV2 418 aa8.95□□□□□ -0.98
NPM1-203ENST00000393820 BARGINQ6ZT62 677 aa8.95□□□□□ -0.98
NPM1-203ENST00000393820 PRDM2Q13029 1718 aa8.93□□□□□ -0.98
NPM1-203ENST00000393820 RBM26Q5T8P6 1007 aaKnown RBP8.93□□□□□ -0.98
NPM1-203ENST00000393820 IFT140Q96RY7 1462 aa8.93□□□□□ -0.98
NPM1-203ENST00000393820 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
NPM1-203ENST00000393820 ANO8Q9HCE9 1232 aaPredicted RBP8.91□□□□□ -0.98
NPM1-203ENST00000393820 CCDC88BA6NC98 1476 aa8.91□□□□□ -0.98
NPM1-203ENST00000393820 PRIM1P49642 420 aaKnown RBP8.9□□□□□ -0.98
NPM1-203ENST00000393820 NYAP1Q6ZVC0 841 aa8.9□□□□□ -0.99
NPM1-203ENST00000393820 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
NPM1-203ENST00000393820 JPH4Q96JJ6 628 aa8.89□□□□□ -0.99
NPM1-203ENST00000393820 OSBPP22059 807 aa8.88□□□□□ -0.99
NPM1-203ENST00000393820 KCNC4Q03721 635 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms