RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 SHROOM2Q13796 1616 aa15.34■□□□□ 0.05
SPOP-202ENST00000393328 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
SPOP-202ENST00000393328 PLEKHH2Q8IVE3 1493 aa15.33■□□□□ 0.04
SPOP-202ENST00000393328 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
SPOP-202ENST00000393328 USP47Q96K76 1375 aa15.32■□□□□ 0.04
SPOP-202ENST00000393328 PREX2Q70Z35 1606 aa15.31■□□□□ 0.04
SPOP-202ENST00000393328 TRAPPC8Q9Y2L5 1435 aa15.3■□□□□ 0.04
SPOP-202ENST00000393328 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
SPOP-202ENST00000393328 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
SPOP-202ENST00000393328 SHANK2Q9UPX8 1470 aa15.3■□□□□ 0.04
SPOP-202ENST00000393328 NBPF1Q3BBV0 1214 aa15.29■□□□□ 0.04
SPOP-202ENST00000393328 SALL2Q9Y467 1007 aaPredicted RBP15.29■□□□□ 0.04
SPOP-202ENST00000393328 IL27Q8NEV9 243 aa15.28■□□□□ 0.04
SPOP-202ENST00000393328 CLASP1Q7Z460 1538 aa15.28■□□□□ 0.04
SPOP-202ENST00000393328 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
SPOP-202ENST00000393328 SPAG9O60271 1321 aaKnown RBP15.28■□□□□ 0.04
SPOP-202ENST00000393328 PRKRIP1Q9H875 184 aaPredicted RBP15.27■□□□□ 0.04
SPOP-202ENST00000393328 CNTLNQ9NXG0 1405 aa15.27■□□□□ 0.03
SPOP-202ENST00000393328 PLCH2O75038 1416 aa15.26■□□□□ 0.03
SPOP-202ENST00000393328 SPATA31E1Q6ZUB1 1445 aa15.25■□□□□ 0.03
SPOP-202ENST00000393328 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
SPOP-202ENST00000393328 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.25■□□□□ 0.03
SPOP-202ENST00000393328 ARHGEF5Q12774 1597 aa15.25■□□□□ 0.03
SPOP-202ENST00000393328 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
SPOP-202ENST00000393328 CCDC144AA2RUR9 1427 aa15.24■□□□□ 0.03
SPOP-202ENST00000393328 RTL5Q5HYW3 569 aaPredicted RBP15.24■□□□□ 0.03
SPOP-202ENST00000393328 LAS1LQ9Y4W2 734 aaKnown RBP15.24■□□□□ 0.03
SPOP-202ENST00000393328 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
SPOP-202ENST00000393328 ROCK2O75116 1388 aaKnown RBP15.23■□□□□ 0.03
SPOP-202ENST00000393328 KIF3BO15066 747 aa15.23■□□□□ 0.03
SPOP-202ENST00000393328 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
SPOP-202ENST00000393328 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.02
SPOP-202ENST00000393328 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
SPOP-202ENST00000393328 SCAPERQ9BY12 1400 aa15.2■□□□□ 0.02
SPOP-202ENST00000393328 PLA2R1Q13018 1463 aa15.2■□□□□ 0.02
SPOP-202ENST00000393328 ANP32AP39687 249 aaKnown RBP15.19■□□□□ 0.02
SPOP-202ENST00000393328 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
SPOP-202ENST00000393328 ASXL2Q76L83 1435 aa15.16■□□□□ 0.02
SPOP-202ENST00000393328 UHRF1BP1LA0JNW5 1464 aa15.16■□□□□ 0.02
SPOP-202ENST00000393328 WDR7Q9Y4E6 1490 aa15.16■□□□□ 0.02
SPOP-202ENST00000393328 FANCAO15360 1455 aa15.15■□□□□ 0.02
SPOP-202ENST00000393328 SKAP1Q86WV1 359 aa15.14■□□□□ 0.01
SPOP-202ENST00000393328 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
SPOP-202ENST00000393328 KDM5DQ9BY66 1539 aa15.14■□□□□ 0.01
SPOP-202ENST00000393328 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
SPOP-202ENST00000393328 GGT6Q6P531 493 aa15.13■□□□□ 0.01
SPOP-202ENST00000393328 ABCC1P33527 1531 aa15.13■□□□□ 0.01
SPOP-202ENST00000393328 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
SPOP-202ENST00000393328 RALGAPBQ86X10 1494 aa15.12■□□□□ 0.01
SPOP-202ENST00000393328 DUOX2Q9NRD8 1548 aa15.12■□□□□ 0.01
SPOP-202ENST00000393328 A2MP01023 1474 aa15.11■□□□□ 0.01
SPOP-202ENST00000393328 ZBED9Q6R2W3 1325 aa15.11■□□□□ 0.01
SPOP-202ENST00000393328 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
SPOP-202ENST00000393328 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
SPOP-202ENST00000393328 ADGRL1O94910 1474 aa15.11■□□□□ 0.01
SPOP-202ENST00000393328 KDM5CP41229 1560 aa15.11■□□□□ 0.01
SPOP-202ENST00000393328 RAPGEF3O95398 923 aa15.1■□□□□ 0.01
SPOP-202ENST00000393328 PRAG1Q86YV5 1406 aa15.1■□□□□ 0.01
SPOP-202ENST00000393328 CC2D1BQ5T0F9 858 aaKnown RBP15.09■□□□□ 0.01
SPOP-202ENST00000393328 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
SPOP-202ENST00000393328 NEFMP07197 916 aa15.09■□□□□ 0.01
SPOP-202ENST00000393328 ERICH6BQ5W0A0 696 aa15.09■□□□□ 0.01
SPOP-202ENST00000393328 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0
SPOP-202ENST00000393328 ERBINQ96RT1 1412 aa15.07■□□□□ 0
SPOP-202ENST00000393328 NUTM2DQ5VT03 806 aaPredicted RBP15.06■□□□□ 0
SPOP-202ENST00000393328 UNC13BO14795 1591 aa15.06■□□□□ 0
SPOP-202ENST00000393328 PLXNC1O60486 1568 aa15.06■□□□□ 0
SPOP-202ENST00000393328 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ -0
SPOP-202ENST00000393328 DISP3Q9P2K9 1392 aa15.05■□□□□ -0
SPOP-202ENST00000393328 ZFYVE16Q7Z3T8 1539 aa15.04■□□□□ -0
SPOP-202ENST00000393328 SLC4A3P48751 1232 aa15.03■□□□□ -0
SPOP-202ENST00000393328 PANK3Q9H999 370 aa15.03■□□□□ -0
SPOP-202ENST00000393328 CD109Q6YHK3 1445 aa15.03■□□□□ -0
SPOP-202ENST00000393328 IQGAP3Q86VI3 1631 aa15.03■□□□□ -0
SPOP-202ENST00000393328 KANK1Q14678 1352 aa15.03■□□□□ -0
SPOP-202ENST00000393328 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
SPOP-202ENST00000393328 TESK2Q96S53 571 aa15.03■□□□□ -0
SPOP-202ENST00000393328 NUDCQ9Y266 331 aa15.02■□□□□ -0
SPOP-202ENST00000393328 CFAP70Q5T0N1 1121 aa15.02□□□□□ -0.01
SPOP-202ENST00000393328 ATP7AQ04656 1500 aa15.02□□□□□ -0.01
SPOP-202ENST00000393328 UGGT1Q9NYU2 1555 aa15.01□□□□□ -0.01
SPOP-202ENST00000393328 BRPF3Q9ULD4 1205 aa15□□□□□ -0.01
SPOP-202ENST00000393328 ATP10AO60312 1499 aa15□□□□□ -0.01
SPOP-202ENST00000393328 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
SPOP-202ENST00000393328 RTEL1-TNFRSF6BF6WH68 1400 aa14.99□□□□□ -0.01
SPOP-202ENST00000393328 TMF1P82094 1093 aa14.98□□□□□ -0.01
SPOP-202ENST00000393328 ADGRF5Q8IZF2 1346 aa14.98□□□□□ -0.01
SPOP-202ENST00000393328 E9PCH4 1651 aa14.98□□□□□ -0.01
SPOP-202ENST00000393328 PNISRQ8TF01 805 aaKnown RBP14.98□□□□□ -0.01
SPOP-202ENST00000393328 PLIN1O60240 522 aa14.97□□□□□ -0.01
SPOP-202ENST00000393328 TRPM1Q7Z4N2 1603 aa14.97□□□□□ -0.01
SPOP-202ENST00000393328 ABCA9Q8IUA7 1624 aa14.97□□□□□ -0.01
SPOP-202ENST00000393328 ARID4BQ4LE39 1312 aaPredicted RBP14.97□□□□□ -0.01
SPOP-202ENST00000393328 MAGI2Q86UL8 1455 aa14.96□□□□□ -0.01
SPOP-202ENST00000393328 WASHC2CQ9Y4E1 1318 aa14.96□□□□□ -0.01
SPOP-202ENST00000393328 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.01
SPOP-202ENST00000393328 PDE4AP27815 886 aa14.95□□□□□ -0.02
SPOP-202ENST00000393328 PER1O15534 1290 aaPredicted RBP14.94□□□□□ -0.02
SPOP-202ENST00000393328 MYBBP1AQ9BQG0 1328 aaKnown RBP14.94□□□□□ -0.02
SPOP-202ENST00000393328 TMEM132EQ6IEE7 984 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms