RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 A0A0G2JS52 829 aa7.49□□□□□ -1.21
GTDC1-204ENST00000392869 RGS3P49796 1198 aa7.49□□□□□ -1.21
GTDC1-204ENST00000392869 AEBP2Q6ZN18 517 aaPredicted RBP7.49□□□□□ -1.21
GTDC1-204ENST00000392869 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
GTDC1-204ENST00000392869 REC8O95072 547 aa7.48□□□□□ -1.21
GTDC1-204ENST00000392869 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
GTDC1-204ENST00000392869 C14orf37Q86TY3 774 aa7.48□□□□□ -1.21
GTDC1-204ENST00000392869 RASSF8Q8NHQ8 419 aa7.48□□□□□ -1.21
GTDC1-204ENST00000392869 CENPQQ7L2Z9 268 aaPredicted RBP7.48□□□□□ -1.21
GTDC1-204ENST00000392869 ERLIN2O94905 339 aa7.48□□□□□ -1.21
GTDC1-204ENST00000392869 EIF3JO75822 258 aaKnown RBP7.48□□□□□ -1.21
GTDC1-204ENST00000392869 AMOTL1Q8IY63 956 aa7.48□□□□□ -1.21
GTDC1-204ENST00000392869 NUCB2P80303 420 aa7.47□□□□□ -1.21
GTDC1-204ENST00000392869 SMC4Q9NTJ3 1288 aa7.47□□□□□ -1.21
GTDC1-204ENST00000392869 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
GTDC1-204ENST00000392869 FANCIQ9NVI1 1328 aa7.47□□□□□ -1.21
GTDC1-204ENST00000392869 DEF6Q9H4E7 631 aa7.47□□□□□ -1.21
GTDC1-204ENST00000392869 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
GTDC1-204ENST00000392869 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
GTDC1-204ENST00000392869 RUFY2Q8WXA3 655 aa7.47□□□□□ -1.21
GTDC1-204ENST00000392869 FRAT1Q92837 279 aaPredicted RBP7.47□□□□□ -1.21
GTDC1-204ENST00000392869 FAM43AQ8N2R8 423 aa7.46□□□□□ -1.21
GTDC1-204ENST00000392869 DYDC1Q8WWB3 177 aa7.46□□□□□ -1.21
GTDC1-204ENST00000392869 GOLGA6L10A0A0M3HER8 536 aa7.46□□□□□ -1.21
GTDC1-204ENST00000392869 PLEKHD1A6NEE1 506 aa7.46□□□□□ -1.21
GTDC1-204ENST00000392869 TNIKQ9UKE5 1360 aa7.46□□□□□ -1.21
GTDC1-204ENST00000392869 MCM3P25205 808 aa7.46□□□□□ -1.21
GTDC1-204ENST00000392869 GOLGA6L10A6NI86 522 aa7.46□□□□□ -1.22
GTDC1-204ENST00000392869 KIF27Q86VH2 1401 aa7.46□□□□□ -1.22
GTDC1-204ENST00000392869 RTN4Q9NQC3 1192 aaKnown RBP7.46□□□□□ -1.22
GTDC1-204ENST00000392869 UACAQ9BZF9 1416 aa7.45□□□□□ -1.22
GTDC1-204ENST00000392869 NACADO15069 1562 aa7.45□□□□□ -1.22
GTDC1-204ENST00000392869 H3BQV1 296 aa7.45□□□□□ -1.22
GTDC1-204ENST00000392869 MCM2P49736 904 aa7.45□□□□□ -1.22
GTDC1-204ENST00000392869 IFFO2Q5TF58 517 aa7.45□□□□□ -1.22
GTDC1-204ENST00000392869 STK31Q9BXU1 1019 aa7.45□□□□□ -1.22
GTDC1-204ENST00000392869 ERLIN1O75477 346 aa7.45□□□□□ -1.22
GTDC1-204ENST00000392869 ANKRD30AQ9BXX3 1397 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 KIAA0754O94854 1291 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 EZRP15311 586 aaKnown RBP7.44□□□□□ -1.22
GTDC1-204ENST00000392869 SMARCE1Q969G3 411 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 GBP2P32456 591 aaPredicted RBP7.44□□□□□ -1.22
GTDC1-204ENST00000392869 AKAP17AQ02040 695 aaKnown RBP7.44□□□□□ -1.22
GTDC1-204ENST00000392869 SYNE3Q6ZMZ3 975 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 TRIM29Q14134 588 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 RCAN3Q9UKA8 241 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 PPM1EQ8WY54 764 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 CENPJQ9HC77 1338 aaPredicted RBP7.44□□□□□ -1.22
GTDC1-204ENST00000392869 BAZ1BQ9UIG0 1483 aaKnown RBP7.44□□□□□ -1.22
GTDC1-204ENST00000392869 FAM161AQ3B820 660 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 VSIG10Q8N0Z9 540 aa7.44□□□□□ -1.22
GTDC1-204ENST00000392869 DDX11Q96FC9 970 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 CGNL1Q0VF96 1302 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 E9PSI1 815 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 MRE11P49959 708 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 ODF2Q5BJF6 829 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 U2SURPO15042 1029 aaKnown RBP7.43□□□□□ -1.22
GTDC1-204ENST00000392869 ZKSCAN1P17029 563 aaPredicted RBP7.43□□□□□ -1.22
GTDC1-204ENST00000392869 FAM184AQ8NB25 1140 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 HDGFL2Q7Z4V5 671 aaPredicted RBP7.43□□□□□ -1.22
GTDC1-204ENST00000392869 SPATA24Q86W54 205 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 KIF2AO00139 706 aaPredicted RBP7.43□□□□□ -1.22
GTDC1-204ENST00000392869 HOMER1Q86YM7 354 aa7.43□□□□□ -1.22
GTDC1-204ENST00000392869 DDX49Q9Y6V7 483 aaKnown RBP7.43□□□□□ -1.22
GTDC1-204ENST00000392869 RRP9O43818 475 aaKnown RBP7.42□□□□□ -1.22
GTDC1-204ENST00000392869 MBD3O95983 291 aa7.42□□□□□ -1.22
GTDC1-204ENST00000392869 POGKQ9P215 609 aa7.42□□□□□ -1.22
GTDC1-204ENST00000392869 CCNB3Q8WWL7 1395 aa7.42□□□□□ -1.22
GTDC1-204ENST00000392869 AMER1Q5JTC6 1135 aaPredicted RBP7.42□□□□□ -1.22
GTDC1-204ENST00000392869 CHMP5Q9NZZ3 219 aa7.42□□□□□ -1.22
GTDC1-204ENST00000392869 RRP7BPQ9NSQ0 103 aa7.42□□□□□ -1.22
GTDC1-204ENST00000392869 ARHGAP35Q9NRY4 1499 aa7.42□□□□□ -1.22
GTDC1-204ENST00000392869 KIF3BO15066 747 aa7.42□□□□□ -1.22
GTDC1-204ENST00000392869 XBP1P17861 261 aa7.41□□□□□ -1.22
GTDC1-204ENST00000392869 SASS6Q6UVJ0 657 aa7.41□□□□□ -1.22
GTDC1-204ENST00000392869 HMGB2P26583 209 aaKnown RBP7.41□□□□□ -1.22
GTDC1-204ENST00000392869 GBP3Q9H0R5 595 aa7.41□□□□□ -1.22
GTDC1-204ENST00000392869 TULP1O00294 542 aaPredicted RBP7.41□□□□□ -1.22
GTDC1-204ENST00000392869 MFAP1P55081 439 aaKnown RBP7.41□□□□□ -1.22
GTDC1-204ENST00000392869 DESP17661 470 aa7.41□□□□□ -1.22
GTDC1-204ENST00000392869 GORABQ5T7V8 394 aa7.41□□□□□ -1.22
GTDC1-204ENST00000392869 BRMS1Q9HCU9 246 aa7.41□□□□□ -1.22
GTDC1-204ENST00000392869 TCEAL9Q9UHQ7 104 aa7.41□□□□□ -1.22
GTDC1-204ENST00000392869 SCAPERQ9BY12 1400 aa7.4□□□□□ -1.22
GTDC1-204ENST00000392869 IRX6P78412 446 aaPredicted RBP7.4□□□□□ -1.22
GTDC1-204ENST00000392869 DACH1Q9UI36 760 aa7.4□□□□□ -1.22
GTDC1-204ENST00000392869 PDCP20941 246 aa7.4□□□□□ -1.22
GTDC1-204ENST00000392869 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.22
GTDC1-204ENST00000392869 KCNH8Q96L42 1107 aa7.4□□□□□ -1.22
GTDC1-204ENST00000392869 NINLQ9Y2I6 1382 aa7.4□□□□□ -1.22
GTDC1-204ENST00000392869 ERCC6Q03468 1493 aa7.4□□□□□ -1.23
GTDC1-204ENST00000392869 FYB1O15117 783 aa7.4□□□□□ -1.23
GTDC1-204ENST00000392869 STAC3Q96MF2 364 aa7.4□□□□□ -1.23
GTDC1-204ENST00000392869 DNAI2Q9GZS0 605 aa7.4□□□□□ -1.23
GTDC1-204ENST00000392869 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.4□□□□□ -1.23
GTDC1-204ENST00000392869 V9GYY5 206 aaPredicted RBP7.4□□□□□ -1.23
GTDC1-204ENST00000392869 OLFM4Q6UX06 510 aa7.39□□□□□ -1.23
GTDC1-204ENST00000392869 MARCH6O60337 910 aa7.39□□□□□ -1.23
GTDC1-204ENST00000392869 RSPH4AQ5TD94 716 aa7.39□□□□□ -1.23
GTDC1-204ENST00000392869 SETD5Q9C0A6 1442 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms