RNA–Protein interactions for RNA: ENST00000392645.6

ATXN2-204, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-204ENST00000392645 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
ATXN2-204ENST00000392645 CC2D1BQ5T0F9 858 aaKnown RBP19.72■□□□□ 0.75
ATXN2-204ENST00000392645 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
ATXN2-204ENST00000392645 SHANK2Q9UPX8 1470 aa19.71■□□□□ 0.75
ATXN2-204ENST00000392645 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.74
ATXN2-204ENST00000392645 PLA2R1Q13018 1463 aa19.7■□□□□ 0.74
ATXN2-204ENST00000392645 TSHZ2Q9NRE2 1034 aa19.7■□□□□ 0.74
ATXN2-204ENST00000392645 SCAPERQ9BY12 1400 aa19.68■□□□□ 0.74
ATXN2-204ENST00000392645 NUTM2DQ5VT03 806 aaPredicted RBP19.68■□□□□ 0.74
ATXN2-204ENST00000392645 MYO5CQ9NQX4 1742 aa19.67■□□□□ 0.74
ATXN2-204ENST00000392645 PLCH2O75038 1416 aa19.67■□□□□ 0.74
ATXN2-204ENST00000392645 RSPH4AQ5TD94 716 aa19.66■□□□□ 0.74
ATXN2-204ENST00000392645 TMC1Q8TDI8 760 aa19.66■□□□□ 0.74
ATXN2-204ENST00000392645 DHX29Q7Z478 1369 aaKnown RBP19.66■□□□□ 0.74
ATXN2-204ENST00000392645 ARHGEF5Q12774 1597 aa19.66■□□□□ 0.74
ATXN2-204ENST00000392645 GGT6Q6P531 493 aa19.65■□□□□ 0.74
ATXN2-204ENST00000392645 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
ATXN2-204ENST00000392645 KDM5CP41229 1560 aa19.62■□□□□ 0.73
ATXN2-204ENST00000392645 A2MP01023 1474 aa19.6■□□□□ 0.73
ATXN2-204ENST00000392645 CFAP65Q6ZU64 1925 aaKnown RBP19.6■□□□□ 0.73
ATXN2-204ENST00000392645 NPM1P06748 294 aaKnown RBP eCLIP19.6■□□□□ 0.73
ATXN2-204ENST00000392645 OSCARQ8IYS5 282 aa19.6■□□□□ 0.73
ATXN2-204ENST00000392645 RAPGEF3O95398 923 aa19.6■□□□□ 0.73
ATXN2-204ENST00000392645 DISP3Q9P2K9 1392 aa19.59■□□□□ 0.73
ATXN2-204ENST00000392645 B4GALNT3Q6L9W6 998 aa19.59■□□□□ 0.73
ATXN2-204ENST00000392645 RALGAPBQ86X10 1494 aa19.58■□□□□ 0.73
ATXN2-204ENST00000392645 PRAG1Q86YV5 1406 aa19.57■□□□□ 0.72
ATXN2-204ENST00000392645 FANCAO15360 1455 aa19.57■□□□□ 0.72
ATXN2-204ENST00000392645 PANK3Q9H999 370 aa19.57■□□□□ 0.72
ATXN2-204ENST00000392645 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
ATXN2-204ENST00000392645 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
ATXN2-204ENST00000392645 KDM5DQ9BY66 1539 aa19.55■□□□□ 0.72
ATXN2-204ENST00000392645 UGGT1Q9NYU2 1555 aa19.54■□□□□ 0.72
ATXN2-204ENST00000392645 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
ATXN2-204ENST00000392645 UHRF1BP1Q6BDS2 1440 aa19.53■□□□□ 0.72
ATXN2-204ENST00000392645 ABCC1P33527 1531 aa19.53■□□□□ 0.72
ATXN2-204ENST00000392645 CFAP70Q5T0N1 1121 aa19.52■□□□□ 0.72
ATXN2-204ENST00000392645 ADGRL1O94910 1474 aa19.52■□□□□ 0.72
ATXN2-204ENST00000392645 TESK2Q96S53 571 aa19.52■□□□□ 0.71
ATXN2-204ENST00000392645 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
ATXN2-204ENST00000392645 DUOX2Q9NRD8 1548 aa19.5■□□□□ 0.71
ATXN2-204ENST00000392645 ZBED9Q6R2W3 1325 aa19.48■□□□□ 0.71
ATXN2-204ENST00000392645 ADGRF5Q8IZF2 1346 aa19.47■□□□□ 0.71
ATXN2-204ENST00000392645 MYT1Q01538 1121 aa19.46■□□□□ 0.71
ATXN2-204ENST00000392645 SAFB2Q14151 953 aaKnown RBP eCLIP19.46■□□□□ 0.71
ATXN2-204ENST00000392645 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
ATXN2-204ENST00000392645 UNC13BO14795 1591 aa19.44■□□□□ 0.7
ATXN2-204ENST00000392645 UHRF1BP1LA0JNW5 1464 aa19.44■□□□□ 0.7
ATXN2-204ENST00000392645 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
ATXN2-204ENST00000392645 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
ATXN2-204ENST00000392645 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
ATXN2-204ENST00000392645 TMF1P82094 1093 aa19.43■□□□□ 0.7
ATXN2-204ENST00000392645 ZFYVE16Q7Z3T8 1539 aa19.43■□□□□ 0.7
ATXN2-204ENST00000392645 MAST1Q9Y2H9 1570 aa19.43■□□□□ 0.7
ATXN2-204ENST00000392645 TRPM1Q7Z4N2 1603 aa19.42■□□□□ 0.7
ATXN2-204ENST00000392645 IQGAP3Q86VI3 1631 aa19.42■□□□□ 0.7
ATXN2-204ENST00000392645 PLXNC1O60486 1568 aa19.42■□□□□ 0.7
ATXN2-204ENST00000392645 ATP10AO60312 1499 aa19.42■□□□□ 0.7
ATXN2-204ENST00000392645 PER1O15534 1290 aaPredicted RBP19.42■□□□□ 0.7
ATXN2-204ENST00000392645 TRAK1Q9UPV9 953 aa19.42■□□□□ 0.7
ATXN2-204ENST00000392645 E9PCH4 1651 aa19.41■□□□□ 0.7
ATXN2-204ENST00000392645 MYBBP1AQ9BQG0 1328 aaKnown RBP19.41■□□□□ 0.7
ATXN2-204ENST00000392645 POLR1AO95602 1720 aaPredicted RBP19.41■□□□□ 0.7
ATXN2-204ENST00000392645 ATP7AQ04656 1500 aa19.4■□□□□ 0.7
ATXN2-204ENST00000392645 KTN1Q86UP2 1357 aaKnown RBP19.39■□□□□ 0.7
ATXN2-204ENST00000392645 KANK1Q14678 1352 aa19.39■□□□□ 0.69
ATXN2-204ENST00000392645 RBM19Q9Y4C8 960 aaKnown RBP19.39■□□□□ 0.69
ATXN2-204ENST00000392645 CD109Q6YHK3 1445 aa19.38■□□□□ 0.69
ATXN2-204ENST00000392645 WASHC2CQ9Y4E1 1318 aa19.37■□□□□ 0.69
ATXN2-204ENST00000392645 PLIN1O60240 522 aa19.36■□□□□ 0.69
ATXN2-204ENST00000392645 MLECQ14165 292 aa19.36■□□□□ 0.69
ATXN2-204ENST00000392645 CCDC146Q8IYE0 955 aa19.35■□□□□ 0.69
ATXN2-204ENST00000392645 CLTCL1P53675 1640 aa19.35■□□□□ 0.69
ATXN2-204ENST00000392645 KNSTRNQ9Y448 316 aa19.34■□□□□ 0.69
ATXN2-204ENST00000392645 NUDCQ9Y266 331 aa19.33■□□□□ 0.69
ATXN2-204ENST00000392645 RALBP1Q15311 655 aa19.33■□□□□ 0.69
ATXN2-204ENST00000392645 NLRP13Q86W25 1043 aa19.33■□□□□ 0.69
ATXN2-204ENST00000392645 STK26Q9P289 416 aa19.33■□□□□ 0.69
ATXN2-204ENST00000392645 ARID4BQ4LE39 1312 aaPredicted RBP19.33■□□□□ 0.68
ATXN2-204ENST00000392645 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
ATXN2-204ENST00000392645 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
ATXN2-204ENST00000392645 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
ATXN2-204ENST00000392645 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
ATXN2-204ENST00000392645 SKAP1Q86WV1 359 aa19.29■□□□□ 0.68
ATXN2-204ENST00000392645 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
ATXN2-204ENST00000392645 GPRASP1Q5JY77 1395 aa19.28■□□□□ 0.68
ATXN2-204ENST00000392645 ABCA9Q8IUA7 1624 aa19.27■□□□□ 0.68
ATXN2-204ENST00000392645 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
ATXN2-204ENST00000392645 PRDM15P57071 1507 aaPredicted RBP19.27■□□□□ 0.67
ATXN2-204ENST00000392645 NOS1P29475 1434 aa19.27■□□□□ 0.67
ATXN2-204ENST00000392645 FAM69CQ0P6D2 419 aa19.26■□□□□ 0.67
ATXN2-204ENST00000392645 FBXO31Q5XUX0 539 aaPredicted RBP19.26■□□□□ 0.67
ATXN2-204ENST00000392645 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
ATXN2-204ENST00000392645 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
ATXN2-204ENST00000392645 KIDINS220Q9ULH0 1771 aa19.25■□□□□ 0.67
ATXN2-204ENST00000392645 SPHKAPQ2M3C7 1700 aa19.24■□□□□ 0.67
ATXN2-204ENST00000392645 CCDC136Q96JN2 1154 aa19.24■□□□□ 0.67
ATXN2-204ENST00000392645 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
ATXN2-204ENST00000392645 INO80Q9ULG1 1556 aaPredicted RBP19.24■□□□□ 0.67
ATXN2-204ENST00000392645 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms