RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 DDX10Q13206 875 aaKnown RBP28.34■■■□□ 2.13
PTPN11-202ENST00000392597 HIRIP3Q9BW71 556 aaPredicted RBP28.34■■■□□ 2.13
PTPN11-202ENST00000392597 EIF4G2P78344 907 aaKnown RBP eCLIP28.33■■■□□ 2.133e-6■■■■□ 24.2
PTPN11-202ENST00000392597 RICTORQ6R327 1708 aa28.33■■■□□ 2.13
PTPN11-202ENST00000392597 COL17A1Q9UMD9 1497 aaPredicted RBP28.32■■■□□ 2.12
PTPN11-202ENST00000392597 NBPF8Q3BBV2 869 aa28.32■■■□□ 2.12
PTPN11-202ENST00000392597 INO80Q9ULG1 1556 aaPredicted RBP28.31■■■□□ 2.12
PTPN11-202ENST00000392597 KDM5CP41229 1560 aa28.3■■■□□ 2.12
PTPN11-202ENST00000392597 HSPA5P11021 654 aaKnown RBP28.29■■■□□ 2.12
PTPN11-202ENST00000392597 FRMPD1Q5SYB0 1578 aa28.29■■■□□ 2.12
PTPN11-202ENST00000392597 RAPGEF3O95398 923 aa28.27■■■□□ 2.12
PTPN11-202ENST00000392597 AFAP1Q8N556 730 aa28.27■■■□□ 2.12
PTPN11-202ENST00000392597 UHRF1BP1Q6BDS2 1440 aa28.27■■■□□ 2.12
PTPN11-202ENST00000392597 ATP7AQ04656 1500 aa28.27■■■□□ 2.12
PTPN11-202ENST00000392597 ZMYM4Q5VZL5 1548 aa28.24■■■□□ 2.11
PTPN11-202ENST00000392597 ATP10AO60312 1499 aa28.23■■■□□ 2.11
PTPN11-202ENST00000392597 YTHDC1Q96MU7 727 aaKnown RBP28.23■■■□□ 2.11
PTPN11-202ENST00000392597 DEPDC5O75140 1603 aa28.21■■■□□ 2.11
PTPN11-202ENST00000392597 SPATA31E1Q6ZUB1 1445 aa28.21■■■□□ 2.11
PTPN11-202ENST00000392597 MLH3Q9UHC1 1453 aa28.2■■■□□ 2.11
PTPN11-202ENST00000392597 HECW2Q9P2P5 1572 aa28.2■■■□□ 2.11
PTPN11-202ENST00000392597 CCDC144AA2RUR9 1427 aa28.2■■■□□ 2.1
PTPN11-202ENST00000392597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.2■■■□□ 2.19e-7■■■□□ 15.8
PTPN11-202ENST00000392597 PLA2R1Q13018 1463 aa28.18■■■□□ 2.1
PTPN11-202ENST00000392597 EIF2AK4Q9P2K8 1649 aaKnown RBP28.18■■■□□ 2.1
PTPN11-202ENST00000392597 RALGAPBQ86X10 1494 aa28.17■■■□□ 2.1
PTPN11-202ENST00000392597 KIDINS220Q9ULH0 1771 aa28.15■■■□□ 2.1
PTPN11-202ENST00000392597 WASHC2AQ641Q2 1341 aa28.15■■■□□ 2.1
PTPN11-202ENST00000392597 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
PTPN11-202ENST00000392597 DHX29Q7Z478 1369 aaKnown RBP28.12■■■□□ 2.09
PTPN11-202ENST00000392597 ANP32CO43423 234 aa28.1■■■□□ 2.09
PTPN11-202ENST00000392597 SCAF1Q9H7N4 1312 aaKnown RBP28.1■■■□□ 2.09
PTPN11-202ENST00000392597 VWDEQ8N2E2 1590 aa28.1■■■□□ 2.09
PTPN11-202ENST00000392597 MYT1LQ9UL68 1186 aa28.09■■■□□ 2.09
PTPN11-202ENST00000392597 CCDC7Q96M83 1385 aa28.08■■■□□ 2.09
PTPN11-202ENST00000392597 CCER2I3L3R5 266 aa28.08■■■□□ 2.09
PTPN11-202ENST00000392597 TET3O43151 1660 aa28.08■■■□□ 2.08
PTPN11-202ENST00000392597 YEATS2Q9ULM3 1422 aa28.07■■■□□ 2.08
PTPN11-202ENST00000392597 E9PCH4 1651 aa28.06■■■□□ 2.08
PTPN11-202ENST00000392597 ABCA6Q8N139 1617 aa28.06■■■□□ 2.08
PTPN11-202ENST00000392597 PRDM15P57071 1507 aaPredicted RBP28.06■■■□□ 2.08
PTPN11-202ENST00000392597 ARHGEF40Q8TER5 1519 aa28.06■■■□□ 2.08
PTPN11-202ENST00000392597 KANK1Q14678 1352 aa28.06■■■□□ 2.08
PTPN11-202ENST00000392597 DIP2CQ9Y2E4 1556 aa28.05■■■□□ 2.08
PTPN11-202ENST00000392597 USP47Q96K76 1375 aa28.05■■■□□ 2.08
PTPN11-202ENST00000392597 ZNF326Q5BKZ1 582 aaKnown RBP28.04■■■□□ 2.08
PTPN11-202ENST00000392597 DCAF11Q8TEB1 546 aa28.03■■■□□ 2.08
PTPN11-202ENST00000392597 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
PTPN11-202ENST00000392597 TRPM2O94759 1503 aa28.02■■■□□ 2.08
PTPN11-202ENST00000392597 MROH1Q8NDA8 1641 aa28.01■■■□□ 2.07
PTPN11-202ENST00000392597 PTPRTO14522 1441 aa28.01■■■□□ 2.07
PTPN11-202ENST00000392597 PRAG1Q86YV5 1406 aa28.01■■■□□ 2.07
PTPN11-202ENST00000392597 A2MP01023 1474 aa28■■■□□ 2.07
PTPN11-202ENST00000392597 SPHKAPQ2M3C7 1700 aa28■■■□□ 2.07
PTPN11-202ENST00000392597 C11orf95C9JLR9 678 aaPredicted RBP27.98■■■□□ 2.07
PTPN11-202ENST00000392597 TRPM1Q7Z4N2 1603 aa27.98■■■□□ 2.07
PTPN11-202ENST00000392597 REREQ9P2R6 1566 aa27.98■■■□□ 2.07
PTPN11-202ENST00000392597 KIF3BO15066 747 aa27.97■■■□□ 2.07
PTPN11-202ENST00000392597 RNF17Q9BXT8 1623 aaKnown RBP27.97■■■□□ 2.07
PTPN11-202ENST00000392597 ARID4BQ4LE39 1312 aaPredicted RBP27.97■■■□□ 2.07
PTPN11-202ENST00000392597 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
PTPN11-202ENST00000392597 KIF7Q2M1P5 1343 aa27.95■■■□□ 2.07
PTPN11-202ENST00000392597 CARD11Q9BXL7 1154 aa27.95■■■□□ 2.06
PTPN11-202ENST00000392597 BCORL1Q5H9F3 1711 aa27.94■■■□□ 2.06
PTPN11-202ENST00000392597 LAMC1P11047 1609 aa27.93■■■□□ 2.06
PTPN11-202ENST00000392597 LMTK2Q8IWU2 1503 aa27.93■■■□□ 2.06
PTPN11-202ENST00000392597 CEP152O94986 1710 aa27.92■■■□□ 2.06
PTPN11-202ENST00000392597 ROCK2O75116 1388 aaKnown RBP27.9■■■□□ 2.06
PTPN11-202ENST00000392597 GPRASP1Q5JY77 1395 aa27.9■■■□□ 2.06
PTPN11-202ENST00000392597 NEURL4Q96JN8 1562 aa27.9■■■□□ 2.06
PTPN11-202ENST00000392597 RGL3Q3MIN7 710 aa27.89■■■□□ 2.06
PTPN11-202ENST00000392597 EFCAB6Q5THR3 1501 aa27.89■■■□□ 2.06
PTPN11-202ENST00000392597 CLTCL1P53675 1640 aa27.88■■■□□ 2.05
PTPN11-202ENST00000392597 GTF3C3Q9Y5Q9 886 aa27.87■■■□□ 2.05
PTPN11-202ENST00000392597 STAC3Q96MF2 364 aa27.87■■■□□ 2.05
PTPN11-202ENST00000392597 AGLP35573 1532 aa27.86■■■□□ 2.05
PTPN11-202ENST00000392597 SIGLEC1Q9BZZ2 1709 aa27.84■■■□□ 2.05
PTPN11-202ENST00000392597 MADDQ8WXG6 1647 aa27.78■■■□□ 2.04
PTPN11-202ENST00000392597 ST20-MTHFSA0A0A6YYL1 179 aa27.76■■■□□ 2.04
PTPN11-202ENST00000392597 PRKRIP1Q9H875 184 aaPredicted RBP27.73■■■□□ 2.03
PTPN11-202ENST00000392597 KIF1BO60333 1816 aa27.73■■■□□ 2.03
PTPN11-202ENST00000392597 NBPF1Q3BBV0 1214 aa27.72■■■□□ 2.03
PTPN11-202ENST00000392597 ABCC3O15438 1527 aa27.7■■■□□ 2.02
PTPN11-202ENST00000392597 GGT6Q6P531 493 aa27.68■■■□□ 2.02
PTPN11-202ENST00000392597 KIAA1210Q9ULL0 1709 aa27.68■■■□□ 2.02
PTPN11-202ENST00000392597 NPATQ14207 1427 aa27.66■■■□□ 2.02
PTPN11-202ENST00000392597 MYOM2P54296 1465 aa27.66■■■□□ 2.02
PTPN11-202ENST00000392597 ZC3H13Q5T200 1668 aaKnown RBP27.65■■■□□ 2.02
PTPN11-202ENST00000392597 PPP6R1Q9UPN7 881 aa27.65■■■□□ 2.02
PTPN11-202ENST00000392597 UGGT1Q9NYU2 1555 aa27.64■■■□□ 2.02
PTPN11-202ENST00000392597 CAMSAP1Q5T5Y3 1602 aa27.64■■■□□ 2.02
PTPN11-202ENST00000392597 IFT172Q9UG01 1749 aa27.63■■■□□ 2.01
PTPN11-202ENST00000392597 IQGAP1P46940 1657 aa27.63■■■□□ 2.01
PTPN11-202ENST00000392597 MLECQ14165 292 aa27.62■■■□□ 2.01
PTPN11-202ENST00000392597 ADGRB3O60242 1522 aa27.61■■■□□ 2.01
PTPN11-202ENST00000392597 WASHC2CQ9Y4E1 1318 aa27.61■■■□□ 2.01
PTPN11-202ENST00000392597 POLR3GLQ9BT43 218 aa27.6■■■□□ 2.01
PTPN11-202ENST00000392597 ARHGAP31Q2M1Z3 1444 aa27.59■■■□□ 2.01
PTPN11-202ENST00000392597 TESK2Q96S53 571 aa27.59■■■□□ 2.01
PTPN11-202ENST00000392597 MROH2AA6NES4 1674 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms