RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 ATP6V1DQ9Y5K8 247 aa18.48■□□□□ 0.55
CIT-202ENST00000392520 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
CIT-202ENST00000392520 CGNL1Q0VF96 1302 aa18.47■□□□□ 0.55
CIT-202ENST00000392520 TPM3P06753 285 aa18.47■□□□□ 0.55
CIT-202ENST00000392520 GGT6Q6P531 493 aa18.47■□□□□ 0.55
CIT-202ENST00000392520 GORABQ5T7V8 394 aa18.46■□□□□ 0.55
CIT-202ENST00000392520 PRKRIP1Q9H875 184 aaPredicted RBP18.46■□□□□ 0.55
CIT-202ENST00000392520 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
CIT-202ENST00000392520 EXOC6Q8TAG9 804 aa18.46■□□□□ 0.55
CIT-202ENST00000392520 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
CIT-202ENST00000392520 SLC4A10Q6U841 1118 aa18.45■□□□□ 0.54
CIT-202ENST00000392520 DHX57Q6P158 1386 aaKnown RBP18.43■□□□□ 0.54
CIT-202ENST00000392520 SF3A1Q15459 793 aaKnown RBP18.43■□□□□ 0.54
CIT-202ENST00000392520 E9PSI1 815 aa18.43■□□□□ 0.54
CIT-202ENST00000392520 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
CIT-202ENST00000392520 CHMP4CQ96CF2 233 aa18.42■□□□□ 0.54
CIT-202ENST00000392520 FOXD4L5Q5VV16 416 aaPredicted RBP18.42■□□□□ 0.54
CIT-202ENST00000392520 FOXD4L4Q8WXT5 416 aaPredicted RBP18.42■□□□□ 0.54
CIT-202ENST00000392520 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
CIT-202ENST00000392520 CARMIL2Q6F5E8 1435 aa18.41■□□□□ 0.54
CIT-202ENST00000392520 ZKSCAN2Q63HK3 967 aa18.41■□□□□ 0.54
CIT-202ENST00000392520 GOLGA6L19H0YKK7 550 aa18.41■□□□□ 0.54
CIT-202ENST00000392520 CRBNQ96SW2 442 aa18.41■□□□□ 0.54
CIT-202ENST00000392520 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
CIT-202ENST00000392520 RASSF8Q8NHQ8 419 aa18.39■□□□□ 0.54
CIT-202ENST00000392520 PLIN1O60240 522 aa18.39■□□□□ 0.53
CIT-202ENST00000392520 CHMP5Q9NZZ3 219 aa18.39■□□□□ 0.53
CIT-202ENST00000392520 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
CIT-202ENST00000392520 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
CIT-202ENST00000392520 BECN2A8MW95 431 aa18.38■□□□□ 0.53
CIT-202ENST00000392520 GPS2Q13227 327 aa18.37■□□□□ 0.53
CIT-202ENST00000392520 ST20-MTHFSA0A0A6YYL1 179 aa18.37■□□□□ 0.53
CIT-202ENST00000392520 MLECQ14165 292 aa18.37■□□□□ 0.53
CIT-202ENST00000392520 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
CIT-202ENST00000392520 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
CIT-202ENST00000392520 H3BQV1 296 aa18.36■□□□□ 0.53
CIT-202ENST00000392520 TAF7LQ5H9L4 462 aa18.36■□□□□ 0.53
CIT-202ENST00000392520 RSPH4AQ5TD94 716 aa18.36■□□□□ 0.53
CIT-202ENST00000392520 IFFO2Q5TF58 517 aa18.36■□□□□ 0.53
CIT-202ENST00000392520 PANK3Q9H999 370 aa18.36■□□□□ 0.53
CIT-202ENST00000392520 SETQ01105 290 aaPredicted RBP18.36■□□□□ 0.53
CIT-202ENST00000392520 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
CIT-202ENST00000392520 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
CIT-202ENST00000392520 REC8O95072 547 aa18.35■□□□□ 0.53
CIT-202ENST00000392520 ZNF330Q9Y3S2 320 aaPredicted RBP18.35■□□□□ 0.53
CIT-202ENST00000392520 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.34■□□□□ 0.53
CIT-202ENST00000392520 CREBRFQ8IUR6 639 aa18.34■□□□□ 0.53
CIT-202ENST00000392520 COG6Q9Y2V7 657 aa18.34■□□□□ 0.53
CIT-202ENST00000392520 RRP7AQ9Y3A4 280 aaKnown RBP18.34■□□□□ 0.53
CIT-202ENST00000392520 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
CIT-202ENST00000392520 CSB-PGBD3P0DP91 1061 aa18.33■□□□□ 0.53
CIT-202ENST00000392520 RILPL2Q969X0 211 aa18.33■□□□□ 0.53
CIT-202ENST00000392520 TSR1Q2NL82 804 aaKnown RBP18.33■□□□□ 0.52
CIT-202ENST00000392520 BCL2L13Q9BXK5 485 aa18.32■□□□□ 0.52
CIT-202ENST00000392520 ZNF771Q7L3S4 317 aaPredicted RBP18.32■□□□□ 0.52
CIT-202ENST00000392520 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
CIT-202ENST00000392520 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
CIT-202ENST00000392520 TPM1P09493 284 aa18.31■□□□□ 0.52
CIT-202ENST00000392520 CEP89Q96ST8 783 aa18.3■□□□□ 0.52
CIT-202ENST00000392520 CCAR2Q8N163 923 aaKnown RBP18.3■□□□□ 0.52
CIT-202ENST00000392520 FAM13BQ9NYF5 915 aa18.3■□□□□ 0.52
CIT-202ENST00000392520 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
CIT-202ENST00000392520 KIF3BO15066 747 aa18.29■□□□□ 0.52
CIT-202ENST00000392520 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
CIT-202ENST00000392520 CCDC70Q6NSX1 233 aa18.29■□□□□ 0.52
CIT-202ENST00000392520 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
CIT-202ENST00000392520 NUCB2P80303 420 aa18.28■□□□□ 0.52
CIT-202ENST00000392520 TOMM22Q9NS69 142 aa18.28■□□□□ 0.52
CIT-202ENST00000392520 FOXD4L6Q3SYB3 417 aaPredicted RBP18.27■□□□□ 0.52
CIT-202ENST00000392520 FOXD4L3Q6VB84 417 aaPredicted RBP18.27■□□□□ 0.52
CIT-202ENST00000392520 RUFY2Q8WXA3 655 aa18.27■□□□□ 0.52
CIT-202ENST00000392520 USP47Q96K76 1375 aa18.27■□□□□ 0.52
CIT-202ENST00000392520 CCDC144AA2RUR9 1427 aa18.27■□□□□ 0.51
CIT-202ENST00000392520 AMPHP49418 695 aa18.26■□□□□ 0.51
CIT-202ENST00000392520 ZNF592Q92610 1267 aa18.26■□□□□ 0.51
CIT-202ENST00000392520 TEX35Q5T0J7 233 aa18.26■□□□□ 0.51
CIT-202ENST00000392520 DIAPH3Q9NSV4 1193 aa18.26■□□□□ 0.51
CIT-202ENST00000392520 PES1O00541 588 aaKnown RBP18.26■□□□□ 0.51
CIT-202ENST00000392520 APAF1O14727 1248 aa18.26■□□□□ 0.51
CIT-202ENST00000392520 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
CIT-202ENST00000392520 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
CIT-202ENST00000392520 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.515e-6■■■■□ 21.1
CIT-202ENST00000392520 AAMPQ13685 434 aa18.25■□□□□ 0.51
CIT-202ENST00000392520 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
CIT-202ENST00000392520 DZIP1LQ8IYY4 767 aaKnown RBP18.24■□□□□ 0.51
CIT-202ENST00000392520 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
CIT-202ENST00000392520 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
CIT-202ENST00000392520 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
CIT-202ENST00000392520 MRE11P49959 708 aa18.23■□□□□ 0.51
CIT-202ENST00000392520 RAPGEF2Q9Y4G8 1499 aa18.23■□□□□ 0.51
CIT-202ENST00000392520 TRAK1Q9UPV9 953 aa18.23■□□□□ 0.51
CIT-202ENST00000392520 TPM2P07951 284 aa18.23■□□□□ 0.51
CIT-202ENST00000392520 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
CIT-202ENST00000392520 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
CIT-202ENST00000392520 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
CIT-202ENST00000392520 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
CIT-202ENST00000392520 IPO7O95373 1038 aaKnown RBP18.21■□□□□ 0.51
CIT-202ENST00000392520 LRRFIP1Q32MZ4 808 aaKnown RBP18.21■□□□□ 0.51
CIT-202ENST00000392520 MTERF4Q7Z6M4 381 aaKnown RBP18.21■□□□□ 0.51
CIT-202ENST00000392520 MARCH6O60337 910 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms