RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 HECW2Q9P2P5 1572 aa16.38■□□□□ 0.21
SMARCAL1-203ENST00000392128 L3MBTL2Q969R5 705 aa16.38■□□□□ 0.21
SMARCAL1-203ENST00000392128 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-203ENST00000392128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.214e-6■□□□□ 11.1
SMARCAL1-203ENST00000392128 RICTORQ6R327 1708 aa16.34■□□□□ 0.21
SMARCAL1-203ENST00000392128 MYT1Q01538 1121 aa16.34■□□□□ 0.21
SMARCAL1-203ENST00000392128 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
SMARCAL1-203ENST00000392128 PRDM15P57071 1507 aaPredicted RBP16.33■□□□□ 0.2
SMARCAL1-203ENST00000392128 ATP10AO60312 1499 aa16.33■□□□□ 0.2
SMARCAL1-203ENST00000392128 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
SMARCAL1-203ENST00000392128 A2MP01023 1474 aa16.32■□□□□ 0.2
SMARCAL1-203ENST00000392128 MROH1Q8NDA8 1641 aa16.32■□□□□ 0.2
SMARCAL1-203ENST00000392128 TET3O43151 1660 aa16.31■□□□□ 0.2
SMARCAL1-203ENST00000392128 PPRC1Q5VV67 1664 aaKnown RBP16.31■□□□□ 0.2
SMARCAL1-203ENST00000392128 BCORL1Q5H9F3 1711 aa16.31■□□□□ 0.2
SMARCAL1-203ENST00000392128 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
SMARCAL1-203ENST00000392128 ABCA6Q8N139 1617 aa16.31■□□□□ 0.2
SMARCAL1-203ENST00000392128 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
SMARCAL1-203ENST00000392128 E9PCH4 1651 aa16.3■□□□□ 0.2
SMARCAL1-203ENST00000392128 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
SMARCAL1-203ENST00000392128 FRMPD1Q5SYB0 1578 aa16.29■□□□□ 0.2
SMARCAL1-203ENST00000392128 CCDC144AA2RUR9 1427 aa16.29■□□□□ 0.2
SMARCAL1-203ENST00000392128 KANK1Q14678 1352 aa16.28■□□□□ 0.2
SMARCAL1-203ENST00000392128 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
SMARCAL1-203ENST00000392128 KIF3BO15066 747 aa16.27■□□□□ 0.2
SMARCAL1-203ENST00000392128 TSPOAP1O95153 1857 aa16.27■□□□□ 0.2
SMARCAL1-203ENST00000392128 DIP2CQ9Y2E4 1556 aa16.26■□□□□ 0.19
SMARCAL1-203ENST00000392128 UHRF1BP1Q6BDS2 1440 aa16.26■□□□□ 0.19
SMARCAL1-203ENST00000392128 RAPGEF3O95398 923 aa16.26■□□□□ 0.19
SMARCAL1-203ENST00000392128 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
SMARCAL1-203ENST00000392128 SPHKAPQ2M3C7 1700 aa16.26■□□□□ 0.19
SMARCAL1-203ENST00000392128 ZMYM4Q5VZL5 1548 aa16.26■□□□□ 0.19
SMARCAL1-203ENST00000392128 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
SMARCAL1-203ENST00000392128 TRPM2O94759 1503 aa16.24■□□□□ 0.19
SMARCAL1-203ENST00000392128 PTPRTO14522 1441 aa16.23■□□□□ 0.19
SMARCAL1-203ENST00000392128 EFCAB6Q5THR3 1501 aa16.22■□□□□ 0.19
SMARCAL1-203ENST00000392128 CEP152O94986 1710 aa16.21■□□□□ 0.19
SMARCAL1-203ENST00000392128 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMARCAL1-203ENST00000392128 RALGAPBQ86X10 1494 aa16.19■□□□□ 0.18
SMARCAL1-203ENST00000392128 HIRIP3Q9BW71 556 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-203ENST00000392128 HSPA5P11021 654 aaKnown RBP16.18■□□□□ 0.18
SMARCAL1-203ENST00000392128 MIER1Q8N108 512 aa16.18■□□□□ 0.18
SMARCAL1-203ENST00000392128 YEATS2Q9ULM3 1422 aa16.17■□□□□ 0.18
SMARCAL1-203ENST00000392128 CLTCL1P53675 1640 aa16.17■□□□□ 0.18
SMARCAL1-203ENST00000392128 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
SMARCAL1-203ENST00000392128 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
SMARCAL1-203ENST00000392128 NEURL4Q96JN8 1562 aa16.16■□□□□ 0.18
SMARCAL1-203ENST00000392128 ABCC3O15438 1527 aa16.15■□□□□ 0.18
SMARCAL1-203ENST00000392128 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.18
SMARCAL1-203ENST00000392128 REREQ9P2R6 1566 aa16.14■□□□□ 0.17
SMARCAL1-203ENST00000392128 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
SMARCAL1-203ENST00000392128 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
SMARCAL1-203ENST00000392128 TRPM1Q7Z4N2 1603 aa16.13■□□□□ 0.17
SMARCAL1-203ENST00000392128 CAMSAP1Q5T5Y3 1602 aa16.13■□□□□ 0.17
SMARCAL1-203ENST00000392128 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
SMARCAL1-203ENST00000392128 GGT6Q6P531 493 aa16.11■□□□□ 0.17
SMARCAL1-203ENST00000392128 KDM2AQ9Y2K7 1162 aa16.11■□□□□ 0.17
SMARCAL1-203ENST00000392128 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
SMARCAL1-203ENST00000392128 RGL3Q3MIN7 710 aa16.11■□□□□ 0.17
SMARCAL1-203ENST00000392128 KIF1BO60333 1816 aa16.1■□□□□ 0.17
SMARCAL1-203ENST00000392128 NPATQ14207 1427 aa16.1■□□□□ 0.17
SMARCAL1-203ENST00000392128 USP47Q96K76 1375 aa16.09■□□□□ 0.17
SMARCAL1-203ENST00000392128 LAMC1P11047 1609 aa16.09■□□□□ 0.17
SMARCAL1-203ENST00000392128 AGLP35573 1532 aa16.09■□□□□ 0.17
SMARCAL1-203ENST00000392128 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.17
SMARCAL1-203ENST00000392128 COL17A1Q9UMD9 1497 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-203ENST00000392128 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
SMARCAL1-203ENST00000392128 ARHGEF40Q8TER5 1519 aa16.07■□□□□ 0.16
SMARCAL1-203ENST00000392128 ARHGAP31Q2M1Z3 1444 aa16.07■□□□□ 0.16
SMARCAL1-203ENST00000392128 CNTLNQ9NXG0 1405 aa16.07■□□□□ 0.16
SMARCAL1-203ENST00000392128 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
SMARCAL1-203ENST00000392128 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
SMARCAL1-203ENST00000392128 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
SMARCAL1-203ENST00000392128 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
SMARCAL1-203ENST00000392128 ROCK2O75116 1388 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-203ENST00000392128 CARD11Q9BXL7 1154 aa16.05■□□□□ 0.16
SMARCAL1-203ENST00000392128 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
SMARCAL1-203ENST00000392128 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
SMARCAL1-203ENST00000392128 IFT172Q9UG01 1749 aa16.04■□□□□ 0.16
SMARCAL1-203ENST00000392128 MROH2AA6NES4 1674 aa16.04■□□□□ 0.16
SMARCAL1-203ENST00000392128 CCDC7Q96M83 1385 aa16.04■□□□□ 0.16
SMARCAL1-203ENST00000392128 NOS1P29475 1434 aa16.04■□□□□ 0.16
SMARCAL1-203ENST00000392128 ADGRB3O60242 1522 aa16.03■□□□□ 0.16
SMARCAL1-203ENST00000392128 PIK3C2BO00750 1634 aa16.02■□□□□ 0.16
SMARCAL1-203ENST00000392128 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.15
SMARCAL1-203ENST00000392128 MYOM2P54296 1465 aa16.01■□□□□ 0.15
SMARCAL1-203ENST00000392128 KIAA1210Q9ULL0 1709 aa16.01■□□□□ 0.15
SMARCAL1-203ENST00000392128 SYNMO15061 1565 aa16■□□□□ 0.15
SMARCAL1-203ENST00000392128 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
SMARCAL1-203ENST00000392128 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
SMARCAL1-203ENST00000392128 KIF7Q2M1P5 1343 aa15.99■□□□□ 0.15
SMARCAL1-203ENST00000392128 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
SMARCAL1-203ENST00000392128 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
SMARCAL1-203ENST00000392128 PPLO60437 1756 aa15.97■□□□□ 0.15
SMARCAL1-203ENST00000392128 NRXN1Q9ULB1 1477 aa15.96■□□□□ 0.14
SMARCAL1-203ENST00000392128 IQGAP1P46940 1657 aa15.95■□□□□ 0.14
SMARCAL1-203ENST00000392128 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
SMARCAL1-203ENST00000392128 ANP32CO43423 234 aa15.95■□□□□ 0.14
SMARCAL1-203ENST00000392128 ST20-MTHFSA0A0A6YYL1 179 aa15.95■□□□□ 0.14
SMARCAL1-203ENST00000392128 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms