RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 PTPREP23469 700 aa12.09□□□□□ -0.47
RNU6-1000P-201ENST00000391066 CDHR5Q9HBB8 845 aa12.09□□□□□ -0.47
RNU6-1000P-201ENST00000391066 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
RNU6-1000P-201ENST00000391066 GPIHBP1Q8IV16 184 aa12.08□□□□□ -0.48
RNU6-1000P-201ENST00000391066 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
RNU6-1000P-201ENST00000391066 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
RNU6-1000P-201ENST00000391066 PBX2P40425 430 aa12.06□□□□□ -0.48
RNU6-1000P-201ENST00000391066 POTEMA6NI47 508 aa12.05□□□□□ -0.48
RNU6-1000P-201ENST00000391066 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
RNU6-1000P-201ENST00000391066 GPR37O15354 613 aa12.05□□□□□ -0.48
RNU6-1000P-201ENST00000391066 PTGDRQ13258 359 aa12.05□□□□□ -0.48
RNU6-1000P-201ENST00000391066 KCNK17Q96T54 332 aa12.05□□□□□ -0.48
RNU6-1000P-201ENST00000391066 FCHSD2O94868 740 aa12.04□□□□□ -0.48
RNU6-1000P-201ENST00000391066 COL9A1P20849 921 aa12.04□□□□□ -0.48
RNU6-1000P-201ENST00000391066 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
RNU6-1000P-201ENST00000391066 PSEN2P49810 448 aa12.03□□□□□ -0.48
RNU6-1000P-201ENST00000391066 CERKQ8TCT0 537 aa12.03□□□□□ -0.48
RNU6-1000P-201ENST00000391066 AXIN2Q9Y2T1 843 aa12.03□□□□□ -0.48
RNU6-1000P-201ENST00000391066 PPP1R3GB7ZBB8 358 aa12.02□□□□□ -0.49
RNU6-1000P-201ENST00000391066 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
RNU6-1000P-201ENST00000391066 HIC1Q14526 733 aa11.99□□□□□ -0.49
RNU6-1000P-201ENST00000391066 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
RNU6-1000P-201ENST00000391066 ZMYND10O75800 440 aa11.98□□□□□ -0.49
RNU6-1000P-201ENST00000391066 TPRNQ4KMQ1 711 aa11.98□□□□□ -0.49
RNU6-1000P-201ENST00000391066 GNPATO15228 680 aa11.97□□□□□ -0.49
RNU6-1000P-201ENST00000391066 PRSS12P56730 875 aa11.97□□□□□ -0.49
RNU6-1000P-201ENST00000391066 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.49
RNU6-1000P-201ENST00000391066 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
RNU6-1000P-201ENST00000391066 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
RNU6-1000P-201ENST00000391066 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
RNU6-1000P-201ENST00000391066 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
RNU6-1000P-201ENST00000391066 RBM27Q9P2N5 1060 aaKnown RBP11.95□□□□□ -0.5
RNU6-1000P-201ENST00000391066 TTC13Q8NBP0 860 aa11.94□□□□□ -0.5
RNU6-1000P-201ENST00000391066 FECHP22830 423 aa11.93□□□□□ -0.5
RNU6-1000P-201ENST00000391066 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNU6-1000P-201ENST00000391066 PADI6Q6TGC4 694 aa11.93□□□□□ -0.5
RNU6-1000P-201ENST00000391066 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
RNU6-1000P-201ENST00000391066 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
RNU6-1000P-201ENST00000391066 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
RNU6-1000P-201ENST00000391066 PROX2Q3B8N5 592 aa11.92□□□□□ -0.5
RNU6-1000P-201ENST00000391066 TRIM6-TRIM34B2RNG4 842 aa11.91□□□□□ -0.5
RNU6-1000P-201ENST00000391066 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
RNU6-1000P-201ENST00000391066 TSKSQ9UJT2 592 aa11.91□□□□□ -0.5
RNU6-1000P-201ENST00000391066 TK2O00142 265 aa11.9□□□□□ -0.5
RNU6-1000P-201ENST00000391066 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
RNU6-1000P-201ENST00000391066 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
RNU6-1000P-201ENST00000391066 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
RNU6-1000P-201ENST00000391066 MINK1Q8N4C8 1332 aaPredicted RBP11.87□□□□□ -0.51
RNU6-1000P-201ENST00000391066 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
RNU6-1000P-201ENST00000391066 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
RNU6-1000P-201ENST00000391066 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
RNU6-1000P-201ENST00000391066 PACS2Q86VP3 889 aa11.86□□□□□ -0.51
RNU6-1000P-201ENST00000391066 KIAA1468Q9P260 1216 aa11.86□□□□□ -0.51
RNU6-1000P-201ENST00000391066 RABGEF1Q9UJ41 708 aa11.86□□□□□ -0.51
RNU6-1000P-201ENST00000391066 IRF6O14896 467 aa11.85□□□□□ -0.51
RNU6-1000P-201ENST00000391066 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
RNU6-1000P-201ENST00000391066 ADGRG1Q9Y653 693 aa11.84□□□□□ -0.51
RNU6-1000P-201ENST00000391066 SLC24A3Q9HC58 644 aa11.83□□□□□ -0.52
RNU6-1000P-201ENST00000391066 BHMG1C9JSJ3 638 aaPredicted RBP11.82□□□□□ -0.52
RNU6-1000P-201ENST00000391066 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
RNU6-1000P-201ENST00000391066 HRO43593 1189 aa11.82□□□□□ -0.52
RNU6-1000P-201ENST00000391066 TATDN2Q93075 761 aa11.82□□□□□ -0.52
RNU6-1000P-201ENST00000391066 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
RNU6-1000P-201ENST00000391066 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
RNU6-1000P-201ENST00000391066 OATP04181 439 aa11.8□□□□□ -0.52
RNU6-1000P-201ENST00000391066 NUDT18Q6ZVK8 323 aa11.8□□□□□ -0.52
RNU6-1000P-201ENST00000391066 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
RNU6-1000P-201ENST00000391066 EYA1Q99502 592 aa11.8□□□□□ -0.52
RNU6-1000P-201ENST00000391066 PNMA3Q9UL41 463 aa11.8□□□□□ -0.52
RNU6-1000P-201ENST00000391066 AK7Q96M32 723 aa11.79□□□□□ -0.52
RNU6-1000P-201ENST00000391066 SMAPO00193 183 aa11.78□□□□□ -0.52
RNU6-1000P-201ENST00000391066 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
RNU6-1000P-201ENST00000391066 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
RNU6-1000P-201ENST00000391066 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.53
RNU6-1000P-201ENST00000391066 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
RNU6-1000P-201ENST00000391066 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
RNU6-1000P-201ENST00000391066 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
RNU6-1000P-201ENST00000391066 MRPL50Q8N5N7 158 aaKnown RBP11.74□□□□□ -0.53
RNU6-1000P-201ENST00000391066 PHOX2BQ99453 314 aa11.74□□□□□ -0.53
RNU6-1000P-201ENST00000391066 TRIM66O15016 1216 aa11.73□□□□□ -0.53
RNU6-1000P-201ENST00000391066 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
RNU6-1000P-201ENST00000391066 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
RNU6-1000P-201ENST00000391066 RCCD1A6NED2 376 aa11.71□□□□□ -0.53
RNU6-1000P-201ENST00000391066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
RNU6-1000P-201ENST00000391066 DNAJB2P25686 324 aa11.69□□□□□ -0.54
RNU6-1000P-201ENST00000391066 AMHR2Q16671 573 aa11.68□□□□□ -0.54
RNU6-1000P-201ENST00000391066 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
RNU6-1000P-201ENST00000391066 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
RNU6-1000P-201ENST00000391066 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
RNU6-1000P-201ENST00000391066 GOLGA8CPA6NN73 597 aa11.65□□□□□ -0.54
RNU6-1000P-201ENST00000391066 PDE4DQ08499 809 aa11.65□□□□□ -0.54
RNU6-1000P-201ENST00000391066 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
RNU6-1000P-201ENST00000391066 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
RNU6-1000P-201ENST00000391066 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
RNU6-1000P-201ENST00000391066 SWT1Q5T5J6 900 aaKnown RBP11.63□□□□□ -0.55
RNU6-1000P-201ENST00000391066 SAMD7Q7Z3H4 446 aa11.63□□□□□ -0.55
RNU6-1000P-201ENST00000391066 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
RNU6-1000P-201ENST00000391066 CLCN1P35523 988 aa11.62□□□□□ -0.55
RNU6-1000P-201ENST00000391066 HDGFP51858 240 aaKnown RBP11.62□□□□□ -0.55
RNU6-1000P-201ENST00000391066 WNT2BQ93097 391 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms