RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 RABGEF1Q9UJ41 708 aa9.91□□□□□ -0.82
RNU6-1009P-201ENST00000390996 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.82
RNU6-1009P-201ENST00000390996 EPAS1Q99814 870 aa9.89□□□□□ -0.83
RNU6-1009P-201ENST00000390996 IFFO2Q5TF58 517 aa9.88□□□□□ -0.83
RNU6-1009P-201ENST00000390996 C6orf132Q5T0Z8 1188 aa9.87□□□□□ -0.83
RNU6-1009P-201ENST00000390996 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
RNU6-1009P-201ENST00000390996 LAPTM4BQ86VI4 370 aa9.84□□□□□ -0.83
RNU6-1009P-201ENST00000390996 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
RNU6-1009P-201ENST00000390996 PDIA6Q15084 440 aa9.83□□□□□ -0.84
RNU6-1009P-201ENST00000390996 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
RNU6-1009P-201ENST00000390996 DDX12PQ92771 950 aa9.83□□□□□ -0.84
RNU6-1009P-201ENST00000390996 ANKK1Q8NFD2 765 aa9.82□□□□□ -0.84
RNU6-1009P-201ENST00000390996 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
RNU6-1009P-201ENST00000390996 RBM33Q96EV2 1170 aaKnown RBP9.81□□□□□ -0.84
RNU6-1009P-201ENST00000390996 BCAMP50895 628 aa9.8□□□□□ -0.84
RNU6-1009P-201ENST00000390996 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
RNU6-1009P-201ENST00000390996 EN1Q05925 392 aaPredicted RBP9.79□□□□□ -0.84
RNU6-1009P-201ENST00000390996 AMER1Q5JTC6 1135 aaPredicted RBP9.79□□□□□ -0.84
RNU6-1009P-201ENST00000390996 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
RNU6-1009P-201ENST00000390996 A0A0G2JS52 829 aa9.78□□□□□ -0.84
RNU6-1009P-201ENST00000390996 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
RNU6-1009P-201ENST00000390996 SEPT9Q9UHD8 586 aaPredicted RBP9.78□□□□□ -0.84
RNU6-1009P-201ENST00000390996 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
RNU6-1009P-201ENST00000390996 SPDYE16A6NNV3 312 aaPredicted RBP9.77□□□□□ -0.85
RNU6-1009P-201ENST00000390996 RGS20O76081 388 aa9.77□□□□□ -0.85
RNU6-1009P-201ENST00000390996 NBR1Q14596 966 aa9.77□□□□□ -0.85
RNU6-1009P-201ENST00000390996 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
RNU6-1009P-201ENST00000390996 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
RNU6-1009P-201ENST00000390996 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
RNU6-1009P-201ENST00000390996 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
RNU6-1009P-201ENST00000390996 E2F4Q16254 413 aa9.75□□□□□ -0.85
RNU6-1009P-201ENST00000390996 FAM98CQ17RN3 349 aaKnown RBP9.75□□□□□ -0.85
RNU6-1009P-201ENST00000390996 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
RNU6-1009P-201ENST00000390996 MAP3K7O43318 606 aa9.73□□□□□ -0.85
RNU6-1009P-201ENST00000390996 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
RNU6-1009P-201ENST00000390996 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
RNU6-1009P-201ENST00000390996 PAXIP1Q6ZW49 1069 aaPredicted RBP9.72□□□□□ -0.85
RNU6-1009P-201ENST00000390996 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
RNU6-1009P-201ENST00000390996 FAM198AQ9UFP1 575 aa9.7□□□□□ -0.86
RNU6-1009P-201ENST00000390996 PACS2Q86VP3 889 aa9.68□□□□□ -0.86
RNU6-1009P-201ENST00000390996 CDCA7LQ96GN5 454 aa9.68□□□□□ -0.86
RNU6-1009P-201ENST00000390996 LRCH3Q96II8 777 aa9.68□□□□□ -0.86
RNU6-1009P-201ENST00000390996 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
RNU6-1009P-201ENST00000390996 TSR3Q9UJK0 312 aaKnown RBP9.68□□□□□ -0.86
RNU6-1009P-201ENST00000390996 OSBPP22059 807 aa9.67□□□□□ -0.86
RNU6-1009P-201ENST00000390996 PRSS12P56730 875 aa9.67□□□□□ -0.86
RNU6-1009P-201ENST00000390996 GRXCR2A6NFK2 248 aa9.66□□□□□ -0.86
RNU6-1009P-201ENST00000390996 C3orf80F5H4A9 247 aa9.66□□□□□ -0.86
RNU6-1009P-201ENST00000390996 HPS5Q9UPZ3 1129 aa9.66□□□□□ -0.86
RNU6-1009P-201ENST00000390996 CERKQ8TCT0 537 aa9.65□□□□□ -0.86
RNU6-1009P-201ENST00000390996 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
RNU6-1009P-201ENST00000390996 SMAPO00193 183 aa9.64□□□□□ -0.87
RNU6-1009P-201ENST00000390996 CDHR5Q9HBB8 845 aa9.64□□□□□ -0.87
RNU6-1009P-201ENST00000390996 KCNC4Q03721 635 aa9.62□□□□□ -0.87
RNU6-1009P-201ENST00000390996 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
RNU6-1009P-201ENST00000390996 TATDN2Q93075 761 aa9.61□□□□□ -0.87
RNU6-1009P-201ENST00000390996 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
RNU6-1009P-201ENST00000390996 NBPF26B4DH59 902 aa9.59□□□□□ -0.87
RNU6-1009P-201ENST00000390996 TTC13Q8NBP0 860 aa9.59□□□□□ -0.87
RNU6-1009P-201ENST00000390996 RBM27Q9P2N5 1060 aaKnown RBP9.59□□□□□ -0.87
RNU6-1009P-201ENST00000390996 PPP4CP60510 307 aa9.58□□□□□ -0.88
RNU6-1009P-201ENST00000390996 NPDC1Q9NQX5 325 aaPredicted RBP9.58□□□□□ -0.88
RNU6-1009P-201ENST00000390996 PNMA3Q9UL41 463 aa9.58□□□□□ -0.88
RNU6-1009P-201ENST00000390996 TJAP1Q5JTD0 557 aa9.56□□□□□ -0.88
RNU6-1009P-201ENST00000390996 NUDT18Q6ZVK8 323 aa9.55□□□□□ -0.88
RNU6-1009P-201ENST00000390996 PADI6Q6TGC4 694 aa9.53□□□□□ -0.88
RNU6-1009P-201ENST00000390996 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
RNU6-1009P-201ENST00000390996 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
RNU6-1009P-201ENST00000390996 MTRQ99707 1265 aa9.51□□□□□ -0.89
RNU6-1009P-201ENST00000390996 MLLT3P42568 568 aaPredicted RBP9.5□□□□□ -0.89
RNU6-1009P-201ENST00000390996 APLP1P51693 650 aa9.49□□□□□ -0.89
RNU6-1009P-201ENST00000390996 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
RNU6-1009P-201ENST00000390996 EYA1Q99502 592 aa9.48□□□□□ -0.89
RNU6-1009P-201ENST00000390996 IL21Q9HBE4 155 aa9.48□□□□□ -0.89
RNU6-1009P-201ENST00000390996 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
RNU6-1009P-201ENST00000390996 ZNF516Q92618 1163 aa9.46□□□□□ -0.9
RNU6-1009P-201ENST00000390996 RNF40O75150 1001 aa9.45□□□□□ -0.9
RNU6-1009P-201ENST00000390996 HDGFP51858 240 aaKnown RBP9.45□□□□□ -0.9
RNU6-1009P-201ENST00000390996 PTGDRQ13258 359 aa9.44□□□□□ -0.9
RNU6-1009P-201ENST00000390996 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
RNU6-1009P-201ENST00000390996 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
RNU6-1009P-201ENST00000390996 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
RNU6-1009P-201ENST00000390996 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
RNU6-1009P-201ENST00000390996 PRKD2Q9BZL6 878 aa9.4□□□□□ -0.9
RNU6-1009P-201ENST00000390996 LCE2BO14633 110 aa9.39□□□□□ -0.91
RNU6-1009P-201ENST00000390996 Q6ZNB5 142 aa9.39□□□□□ -0.91
RNU6-1009P-201ENST00000390996 ADGRG1Q9Y653 693 aa9.39□□□□□ -0.91
RNU6-1009P-201ENST00000390996 LAPTM4AQ15012 233 aa9.38□□□□□ -0.91
RNU6-1009P-201ENST00000390996 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.38□□□□□ -0.91
RNU6-1009P-201ENST00000390996 COPS2P61201 443 aa9.37□□□□□ -0.91
RNU6-1009P-201ENST00000390996 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
RNU6-1009P-201ENST00000390996 DNAJB2P25686 324 aa9.36□□□□□ -0.91
RNU6-1009P-201ENST00000390996 GFRA3O60609 400 aa9.35□□□□□ -0.91
RNU6-1009P-201ENST00000390996 TMEM134Q9H6X4 195 aa9.35□□□□□ -0.91
RNU6-1009P-201ENST00000390996 ZPR1O75312 459 aa9.34□□□□□ -0.91
RNU6-1009P-201ENST00000390996 SLC4A3P48751 1232 aa9.34□□□□□ -0.91
RNU6-1009P-201ENST00000390996 RBM46Q8TBY0 533 aaKnown RBP9.34□□□□□ -0.91
RNU6-1009P-201ENST00000390996 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
RNU6-1009P-201ENST00000390996 SEMA3EO15041 775 aa9.33□□□□□ -0.92
RNU6-1009P-201ENST00000390996 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms