RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 FECHP22830 423 aa3.9□□□□□ -1.79
RNU6-220P-201ENST00000390919 DSG2Q14126 1118 aa3.9□□□□□ -1.79
RNU6-220P-201ENST00000390919 PUS7Q96PZ0 661 aaKnown RBP3.9□□□□□ -1.79
RNU6-220P-201ENST00000390919 BEGAINQ9BUH8 593 aa3.9□□□□□ -1.79
RNU6-220P-201ENST00000390919 POLR3EQ9NVU0 708 aa3.9□□□□□ -1.79
RNU6-220P-201ENST00000390919 USTQ9Y2C2 406 aa3.9□□□□□ -1.79
RNU6-220P-201ENST00000390919 FARP1Q9Y4F1 1045 aaPredicted RBP3.9□□□□□ -1.79
RNU6-220P-201ENST00000390919 SSTR3P32745 418 aaPredicted RBP3.89□□□□□ -1.79
RNU6-220P-201ENST00000390919 MDM2Q00987 491 aaPredicted RBP3.89□□□□□ -1.79
RNU6-220P-201ENST00000390919 TMEM259Q4ZIN3 620 aa3.89□□□□□ -1.79
RNU6-220P-201ENST00000390919 CHADLQ6NUI6 762 aa3.89□□□□□ -1.79
RNU6-220P-201ENST00000390919 PBXIP1Q96AQ6 731 aa3.89□□□□□ -1.79
RNU6-220P-201ENST00000390919 PITPNM1O00562 1244 aa3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 OSBPP22059 807 aa3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 ABL2P42684 1182 aa3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 CLK2P49760 499 aaKnown RBP3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 RSPH4AQ5TD94 716 aa3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 PROCA1Q8NCQ7 364 aaPredicted RBP3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 OXER1Q8TDS5 423 aa3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 GLMNQ92990 594 aa3.88□□□□□ -1.79
RNU6-220P-201ENST00000390919 TBC1D12O60347 775 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 RFC5P40937 340 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 FOXK1P85037 733 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 PTGDRQ13258 359 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 DIXDC1Q155Q3 683 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 SND1Q7KZF4 910 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 DDX12PQ92771 950 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 KIF12Q96FN5 646 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 TMEM106CQ9BVX2 250 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 REPIN1Q9BWE0 567 aaKnown RBP3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 GDPD2Q9HCC8 539 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 SNRKQ9NRH2 765 aa3.87□□□□□ -1.79
RNU6-220P-201ENST00000390919 PLPP6Q8IY26 295 aa3.86□□□□□ -1.79
RNU6-220P-201ENST00000390919 IVNS1ABPQ9Y6Y0 642 aa3.86□□□□□ -1.79
RNU6-220P-201ENST00000390919 RFX1P22670 979 aa3.85□□□□□ -1.79
RNU6-220P-201ENST00000390919 PTGER2P43116 358 aa3.85□□□□□ -1.79
RNU6-220P-201ENST00000390919 MYSM1Q5VVJ2 828 aa3.85□□□□□ -1.79
RNU6-220P-201ENST00000390919 B4GALNT3Q6L9W6 998 aa3.85□□□□□ -1.79
RNU6-220P-201ENST00000390919 UPF1Q92900 1129 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-220P-201ENST00000390919 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-220P-201ENST00000390919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-220P-201ENST00000390919 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.84□□□□□ -1.79
RNU6-220P-201ENST00000390919 G3V3G9 751 aa3.84□□□□□ -1.79
RNU6-220P-201ENST00000390919 EIF5BO60841 1220 aaKnown RBP3.84□□□□□ -1.79
RNU6-220P-201ENST00000390919 TMUB1Q9BVT8 246 aa3.84□□□□□ -1.79
RNU6-220P-201ENST00000390919 FAM217BQ9NTX9 383 aaPredicted RBP3.84□□□□□ -1.79
RNU6-220P-201ENST00000390919 POM121CA8CG34 1229 aa3.83□□□□□ -1.8
RNU6-220P-201ENST00000390919 SOCS7O14512 581 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 OATP04181 439 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 WASHC4Q2M389 1173 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 HDGFL1Q5TGJ6 251 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 MICALL2Q8IY33 904 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 MTMR14Q8NCE2 650 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 TBC1D2Q9BYX2 928 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 VRTNQ9H8Y1 702 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 TBC1D2BQ9UPU7 963 aa3.82□□□□□ -1.8
RNU6-220P-201ENST00000390919 MAP3K7O43318 606 aa3.81□□□□□ -1.8
RNU6-220P-201ENST00000390919 AP1G2O75843 785 aa3.81□□□□□ -1.8
RNU6-220P-201ENST00000390919 PRKAR2AP13861 404 aaKnown RBP3.81□□□□□ -1.8
RNU6-220P-201ENST00000390919 PPP2R2DQ66LE6 453 aa3.81□□□□□ -1.8
RNU6-220P-201ENST00000390919 C2orf72A6NCS6 295 aa3.8□□□□□ -1.8
RNU6-220P-201ENST00000390919 EVI5O60447 810 aa3.8□□□□□ -1.8
RNU6-220P-201ENST00000390919 ERCC3P19447 782 aa3.8□□□□□ -1.8
RNU6-220P-201ENST00000390919 RIC3Q7Z5B4 369 aa3.8□□□□□ -1.8
RNU6-220P-201ENST00000390919 CCER1Q8TC90 406 aaPredicted RBP3.8□□□□□ -1.8
RNU6-220P-201ENST00000390919 PPP1R12CQ9BZL4 782 aa3.8□□□□□ -1.8
RNU6-220P-201ENST00000390919 NDUFB9Q9Y6M9 179 aa3.8□□□□□ -1.8
RNU6-220P-201ENST00000390919 RBM47A0AV96 593 aaKnown RBP3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 CANXP27824 592 aaKnown RBP3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 LMOD1P29536 600 aaPredicted RBP3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 CSPP1Q1MSJ5 1256 aa3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 CFAP70Q5T0N1 1121 aa3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 METTL3Q86U44 580 aaKnown RBP3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 FAM177A1Q8N128 213 aaPredicted RBP3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 PHOX2BQ99453 314 aa3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 EPAS1Q99814 870 aa3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 CDHR5Q9HBB8 845 aa3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 ZRANB1Q9UGI0 708 aa3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 LIMD1Q9UGP4 676 aa3.79□□□□□ -1.8
RNU6-220P-201ENST00000390919 CARNS1A5YM72 827 aa3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 NUTM2BA6NNL0 878 aaPredicted RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 NUTM2EB1AL46 878 aaPredicted RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 PPM1GO15355 546 aaPredicted RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 USP17L8P0C7I0 530 aa3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 CACNB1Q02641 598 aaPredicted RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 EN1Q05925 392 aaPredicted RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 NUTM2DQ5VT03 806 aaPredicted RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 NUTM1Q86Y26 1132 aa3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 NUTM2AQ8IVF1 878 aaPredicted RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 ZNF710Q8N1W2 664 aa3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 MRRFQ96E11 262 aaKnown RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 BCL11AQ9H165 835 aa3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 GNEQ9Y223 722 aaKnown RBP3.78□□□□□ -1.8
RNU6-220P-201ENST00000390919 PALM3A6NDB9 673 aaPredicted RBP3.77□□□□□ -1.81
RNU6-220P-201ENST00000390919 UNCXA6NJT0 531 aa3.77□□□□□ -1.81
RNU6-220P-201ENST00000390919 ATG7O95352 703 aa3.77□□□□□ -1.81
RNU6-220P-201ENST00000390919 PRIM1P49642 420 aaKnown RBP3.77□□□□□ -1.81
RNU6-220P-201ENST00000390919 TUSC1Q2TAM9 212 aa3.77□□□□□ -1.81
RNU6-220P-201ENST00000390919 NLRP7Q8WX94 980 aa3.77□□□□□ -1.81
RNU6-220P-201ENST00000390919 RBM33Q96EV2 1170 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms