RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
TRAV25-201ENST00000390454 ABCC9O60706 1549 aa9.43□□□□□ -0.9
TRAV25-201ENST00000390454 OSBPP22059 807 aa9.43□□□□□ -0.9
TRAV25-201ENST00000390454 FOXK1P85037 733 aa9.43□□□□□ -0.9
TRAV25-201ENST00000390454 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
TRAV25-201ENST00000390454 CD44P16070 742 aaKnown RBP9.42□□□□□ -0.9
TRAV25-201ENST00000390454 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
TRAV25-201ENST00000390454 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
TRAV25-201ENST00000390454 COG6Q9Y2V7 657 aa9.41□□□□□ -0.9
TRAV25-201ENST00000390454 IRF5Q13568 498 aa9.4□□□□□ -0.9
TRAV25-201ENST00000390454 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
TRAV25-201ENST00000390454 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
TRAV25-201ENST00000390454 E9PSI1 815 aa9.39□□□□□ -0.91
TRAV25-201ENST00000390454 MYT1Q01538 1121 aa9.39□□□□□ -0.91
TRAV25-201ENST00000390454 PTGDRQ13258 359 aa9.38□□□□□ -0.91
TRAV25-201ENST00000390454 PLPP6Q8IY26 295 aa9.38□□□□□ -0.91
TRAV25-201ENST00000390454 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
TRAV25-201ENST00000390454 REPIN1Q9BWE0 567 aaKnown RBP9.38□□□□□ -0.91
TRAV25-201ENST00000390454 SSTR3P32745 418 aaPredicted RBP9.37□□□□□ -0.91
TRAV25-201ENST00000390454 PTGER2P43116 358 aa9.36□□□□□ -0.91
TRAV25-201ENST00000390454 PROCA1Q8NCQ7 364 aaPredicted RBP9.36□□□□□ -0.91
TRAV25-201ENST00000390454 DDX12PQ92771 950 aa9.36□□□□□ -0.91
TRAV25-201ENST00000390454 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
TRAV25-201ENST00000390454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRAV25-201ENST00000390454 MDM2Q00987 491 aaPredicted RBP9.35□□□□□ -0.91
TRAV25-201ENST00000390454 CALR3Q96L12 384 aaKnown RBP9.35□□□□□ -0.91
TRAV25-201ENST00000390454 BEGAINQ9BUH8 593 aa9.35□□□□□ -0.91
TRAV25-201ENST00000390454 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
TRAV25-201ENST00000390454 TMUB1Q9BVT8 246 aa9.34□□□□□ -0.91
TRAV25-201ENST00000390454 PRM3Q9NNZ6 103 aa9.34□□□□□ -0.91
TRAV25-201ENST00000390454 IGSF3O75054 1194 aa9.33□□□□□ -0.92
TRAV25-201ENST00000390454 KCNA1Q09470 495 aa9.33□□□□□ -0.92
TRAV25-201ENST00000390454 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
TRAV25-201ENST00000390454 RB1CC1Q8TDY2 1594 aa9.33□□□□□ -0.92
TRAV25-201ENST00000390454 TBC1D12O60347 775 aa9.32□□□□□ -0.92
TRAV25-201ENST00000390454 GABBR2O75899 941 aa9.32□□□□□ -0.92
TRAV25-201ENST00000390454 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
TRAV25-201ENST00000390454 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
TRAV25-201ENST00000390454 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAV25-201ENST00000390454 BRD1O95696 1058 aa9.3□□□□□ -0.92
TRAV25-201ENST00000390454 HMGB1P09429 215 aaKnown RBP9.3□□□□□ -0.92
TRAV25-201ENST00000390454 CLK2P49760 499 aaKnown RBP9.3□□□□□ -0.92
TRAV25-201ENST00000390454 MICALL2Q8IY33 904 aa9.3□□□□□ -0.92
TRAV25-201ENST00000390454 UPF1Q92900 1129 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRAV25-201ENST00000390454 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
TRAV25-201ENST00000390454 RFC5P40937 340 aa9.29□□□□□ -0.92
TRAV25-201ENST00000390454 ILDR1Q86SU0 546 aaPredicted RBP9.29□□□□□ -0.92
TRAV25-201ENST00000390454 MYT1LQ9UL68 1186 aa9.29□□□□□ -0.92
TRAV25-201ENST00000390454 DIXDC1Q155Q3 683 aa9.28□□□□□ -0.92
TRAV25-201ENST00000390454 MYSM1Q5VVJ2 828 aa9.28□□□□□ -0.92
TRAV25-201ENST00000390454 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
TRAV25-201ENST00000390454 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
TRAV25-201ENST00000390454 USTQ9Y2C2 406 aa9.27□□□□□ -0.93
TRAV25-201ENST00000390454 C2orf72A6NCS6 295 aa9.26□□□□□ -0.93
TRAV25-201ENST00000390454 CLCN6P51797 869 aa9.26□□□□□ -0.93
TRAV25-201ENST00000390454 GLMNQ92990 594 aa9.26□□□□□ -0.93
TRAV25-201ENST00000390454 PBXIP1Q96AQ6 731 aa9.26□□□□□ -0.93
TRAV25-201ENST00000390454 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
TRAV25-201ENST00000390454 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
TRAV25-201ENST00000390454 G3V3G9 751 aa9.25□□□□□ -0.93
TRAV25-201ENST00000390454 ABL2P42684 1182 aa9.25□□□□□ -0.93
TRAV25-201ENST00000390454 PHF12Q96QT6 1004 aa9.25□□□□□ -0.93
TRAV25-201ENST00000390454 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
TRAV25-201ENST00000390454 CENPBP07199 599 aaPredicted RBP9.23□□□□□ -0.93
TRAV25-201ENST00000390454 EVI5O60447 810 aa9.22□□□□□ -0.93
TRAV25-201ENST00000390454 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
TRAV25-201ENST00000390454 PHOX2BQ99453 314 aa9.21□□□□□ -0.94
TRAV25-201ENST00000390454 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.94
TRAV25-201ENST00000390454 SOCS7O14512 581 aa9.2□□□□□ -0.94
TRAV25-201ENST00000390454 KIF3CO14782 793 aa9.2□□□□□ -0.94
TRAV25-201ENST00000390454 OATP04181 439 aa9.2□□□□□ -0.94
TRAV25-201ENST00000390454 TIE1P35590 1138 aa9.2□□□□□ -0.94
TRAV25-201ENST00000390454 PPP2R2DQ66LE6 453 aa9.2□□□□□ -0.94
TRAV25-201ENST00000390454 DPY19L2Q6NUT2 758 aa9.2□□□□□ -0.94
TRAV25-201ENST00000390454 MAP3K7O43318 606 aa9.19□□□□□ -0.94
TRAV25-201ENST00000390454 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
TRAV25-201ENST00000390454 LHX8Q68G74 356 aa9.19□□□□□ -0.94
TRAV25-201ENST00000390454 MTMR14Q8NCE2 650 aa9.19□□□□□ -0.94
TRAV25-201ENST00000390454 SCRIBQ14160 1630 aa9.18□□□□□ -0.94
TRAV25-201ENST00000390454 EPAS1Q99814 870 aa9.18□□□□□ -0.94
TRAV25-201ENST00000390454 CDHR5Q9HBB8 845 aa9.18□□□□□ -0.94
TRAV25-201ENST00000390454 TRPC6Q9Y210 931 aa9.18□□□□□ -0.94
TRAV25-201ENST00000390454 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
TRAV25-201ENST00000390454 POM121CA8CG34 1229 aa9.17□□□□□ -0.94
TRAV25-201ENST00000390454 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
TRAV25-201ENST00000390454 MS4A3Q96HJ5 214 aa9.17□□□□□ -0.94
TRAV25-201ENST00000390454 NPDC1Q9NQX5 325 aaPredicted RBP9.17□□□□□ -0.94
TRAV25-201ENST00000390454 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
TRAV25-201ENST00000390454 RFX1P22670 979 aa9.16□□□□□ -0.94
TRAV25-201ENST00000390454 SND1Q7KZF4 910 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRAV25-201ENST00000390454 METTL3Q86U44 580 aaKnown RBP9.16□□□□□ -0.94
TRAV25-201ENST00000390454 USP35Q9P2H5 1018 aa9.16□□□□□ -0.94
TRAV25-201ENST00000390454 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
TRAV25-201ENST00000390454 IVNS1ABPQ9Y6Y0 642 aa9.16□□□□□ -0.94
TRAV25-201ENST00000390454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.15□□□□□ -0.94
TRAV25-201ENST00000390454 HSP90B1P14625 803 aaKnown RBP9.15□□□□□ -0.94
TRAV25-201ENST00000390454 RIC3Q7Z5B4 369 aa9.15□□□□□ -0.94
TRAV25-201ENST00000390454 CCER1Q8TC90 406 aaPredicted RBP9.14□□□□□ -0.95
TRAV25-201ENST00000390454 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
TRAV25-201ENST00000390454 TBC1D2BQ9UPU7 963 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms