RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 SAMD9Q5K651 1589 aa11.48□□□□□ -0.57
TRBV28-201ENST00000390400 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
TRBV28-201ENST00000390400 DISP1Q96F81 1524 aa11.47□□□□□ -0.57
TRBV28-201ENST00000390400 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
TRBV28-201ENST00000390400 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.57
TRBV28-201ENST00000390400 ARHGAP35Q9NRY4 1499 aa11.45□□□□□ -0.58
TRBV28-201ENST00000390400 MKRN3Q13064 507 aaKnown RBP11.45□□□□□ -0.58
TRBV28-201ENST00000390400 NEUROD2Q15784 382 aa11.45□□□□□ -0.58
TRBV28-201ENST00000390400 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
TRBV28-201ENST00000390400 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
TRBV28-201ENST00000390400 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
TRBV28-201ENST00000390400 EMILIN3Q9NT22 766 aa11.44□□□□□ -0.58
TRBV28-201ENST00000390400 ARHGEF11O15085 1522 aa11.44□□□□□ -0.58
TRBV28-201ENST00000390400 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
TRBV28-201ENST00000390400 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
TRBV28-201ENST00000390400 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
TRBV28-201ENST00000390400 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
TRBV28-201ENST00000390400 ARAP1Q96P48 1450 aa11.41□□□□□ -0.58
TRBV28-201ENST00000390400 TIE1P35590 1138 aa11.41□□□□□ -0.58
TRBV28-201ENST00000390400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRBV28-201ENST00000390400 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
TRBV28-201ENST00000390400 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
TRBV28-201ENST00000390400 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
TRBV28-201ENST00000390400 GALR2O43603 387 aaPredicted RBP11.39□□□□□ -0.59
TRBV28-201ENST00000390400 PTPRGP23470 1445 aa11.39□□□□□ -0.59
TRBV28-201ENST00000390400 DSG2Q14126 1118 aa11.39□□□□□ -0.59
TRBV28-201ENST00000390400 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
TRBV28-201ENST00000390400 FMN1Q68DA7 1419 aa11.38□□□□□ -0.59
TRBV28-201ENST00000390400 DPYSL4O14531 572 aa11.38□□□□□ -0.59
TRBV28-201ENST00000390400 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
TRBV28-201ENST00000390400 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
TRBV28-201ENST00000390400 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
TRBV28-201ENST00000390400 EVX2Q03828 476 aa11.35□□□□□ -0.59
TRBV28-201ENST00000390400 PDCD7Q8N8D1 485 aaKnown RBP11.35□□□□□ -0.59
TRBV28-201ENST00000390400 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
TRBV28-201ENST00000390400 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
TRBV28-201ENST00000390400 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
TRBV28-201ENST00000390400 C14orf37Q86TY3 774 aa11.34□□□□□ -0.59
TRBV28-201ENST00000390400 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
TRBV28-201ENST00000390400 UACAQ9BZF9 1416 aa11.33□□□□□ -0.6
TRBV28-201ENST00000390400 ABCA8O94911 1581 aa11.33□□□□□ -0.6
TRBV28-201ENST00000390400 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
TRBV28-201ENST00000390400 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
TRBV28-201ENST00000390400 RAPGEF6Q8TEU7 1601 aa11.32□□□□□ -0.6
TRBV28-201ENST00000390400 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
TRBV28-201ENST00000390400 GPR37O15354 613 aa11.31□□□□□ -0.6
TRBV28-201ENST00000390400 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
TRBV28-201ENST00000390400 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
TRBV28-201ENST00000390400 ABCC2Q92887 1545 aa11.3□□□□□ -0.6
TRBV28-201ENST00000390400 PDIA6Q15084 440 aa11.3□□□□□ -0.6
TRBV28-201ENST00000390400 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
TRBV28-201ENST00000390400 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
TRBV28-201ENST00000390400 UHRF1BP1LA0JNW5 1464 aa11.3□□□□□ -0.6
TRBV28-201ENST00000390400 ADCY10Q96PN6 1610 aa11.29□□□□□ -0.6
TRBV28-201ENST00000390400 ATN1P54259 1190 aaPredicted RBP11.29□□□□□ -0.6
TRBV28-201ENST00000390400 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
TRBV28-201ENST00000390400 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.6
TRBV28-201ENST00000390400 FOXK1P85037 733 aa11.27□□□□□ -0.61
TRBV28-201ENST00000390400 AK7Q96M32 723 aa11.27□□□□□ -0.61
TRBV28-201ENST00000390400 KIF3CO14782 793 aa11.26□□□□□ -0.61
TRBV28-201ENST00000390400 IRX5P78411 483 aaPredicted RBP11.26□□□□□ -0.61
TRBV28-201ENST00000390400 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
TRBV28-201ENST00000390400 C2orf72A6NCS6 295 aa11.25□□□□□ -0.61
TRBV28-201ENST00000390400 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
TRBV28-201ENST00000390400 TRIM66O15016 1216 aa11.25□□□□□ -0.61
TRBV28-201ENST00000390400 PLPP6Q8IY26 295 aa11.25□□□□□ -0.61
TRBV28-201ENST00000390400 CCDC18Q5T9S5 1454 aa11.25□□□□□ -0.61
TRBV28-201ENST00000390400 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
TRBV28-201ENST00000390400 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
TRBV28-201ENST00000390400 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
TRBV28-201ENST00000390400 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
TRBV28-201ENST00000390400 CDK13Q14004 1512 aaKnown RBP11.23□□□□□ -0.61
TRBV28-201ENST00000390400 KDM5BQ9UGL1 1544 aa11.23□□□□□ -0.61
TRBV28-201ENST00000390400 ZCCHC11Q5TAX3 1644 aaKnown RBP11.23□□□□□ -0.61
TRBV28-201ENST00000390400 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
TRBV28-201ENST00000390400 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
TRBV28-201ENST00000390400 ATP10BO94823 1461 aa11.22□□□□□ -0.61
TRBV28-201ENST00000390400 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
TRBV28-201ENST00000390400 CFAP43Q8NDM7 1665 aa11.22□□□□□ -0.61
TRBV28-201ENST00000390400 IL27Q8NEV9 243 aa11.21□□□□□ -0.61
TRBV28-201ENST00000390400 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
TRBV28-201ENST00000390400 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
TRBV28-201ENST00000390400 TMC2Q8TDI7 906 aa11.2□□□□□ -0.62
TRBV28-201ENST00000390400 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
TRBV28-201ENST00000390400 PDE4DQ08499 809 aa11.19□□□□□ -0.62
TRBV28-201ENST00000390400 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
TRBV28-201ENST00000390400 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
TRBV28-201ENST00000390400 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
TRBV28-201ENST00000390400 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
TRBV28-201ENST00000390400 ASXL2Q76L83 1435 aa11.17□□□□□ -0.62
TRBV28-201ENST00000390400 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
TRBV28-201ENST00000390400 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
TRBV28-201ENST00000390400 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
TRBV28-201ENST00000390400 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
TRBV28-201ENST00000390400 PPARGC1BQ86YN6 1023 aaKnown RBP11.16□□□□□ -0.62
TRBV28-201ENST00000390400 OCEL1Q9H607 264 aa11.16□□□□□ -0.62
TRBV28-201ENST00000390400 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
TRBV28-201ENST00000390400 WDR7Q9Y4E6 1490 aa11.15□□□□□ -0.62
TRBV28-201ENST00000390400 OSBPP22059 807 aa11.15□□□□□ -0.62
TRBV28-201ENST00000390400 TROQ12816 1431 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms