RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 FOXD4L6Q3SYB3 417 aaPredicted RBP15.5■□□□□ 0.07
FANCA-202ENST00000389301 FOXD4L3Q6VB84 417 aaPredicted RBP15.5■□□□□ 0.07
FANCA-202ENST00000389301 PRKRIP1Q9H875 184 aaPredicted RBP15.5■□□□□ 0.07
FANCA-202ENST00000389301 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
FANCA-202ENST00000389301 CCDC34Q96HJ3 373 aa15.49■□□□□ 0.07
FANCA-202ENST00000389301 CREBRFQ8IUR6 639 aa15.48■□□□□ 0.07
FANCA-202ENST00000389301 EIF3AQ14152 1382 aaKnown RBP15.48■□□□□ 0.07
FANCA-202ENST00000389301 RRP7AQ9Y3A4 280 aaKnown RBP15.48■□□□□ 0.07
FANCA-202ENST00000389301 TPM3P06753 285 aa15.47■□□□□ 0.07
FANCA-202ENST00000389301 BCL2L13Q9BXK5 485 aa15.47■□□□□ 0.07
FANCA-202ENST00000389301 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
FANCA-202ENST00000389301 ANKRD45Q5TZF3 282 aa15.46■□□□□ 0.07
FANCA-202ENST00000389301 SPAG9O60271 1321 aaKnown RBP15.46■□□□□ 0.07
FANCA-202ENST00000389301 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.06
FANCA-202ENST00000389301 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.06
FANCA-202ENST00000389301 ZNF592Q92610 1267 aa15.45■□□□□ 0.06
FANCA-202ENST00000389301 COG6Q9Y2V7 657 aa15.45■□□□□ 0.06
FANCA-202ENST00000389301 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
FANCA-202ENST00000389301 SETQ01105 290 aaPredicted RBP15.45■□□□□ 0.06
FANCA-202ENST00000389301 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
FANCA-202ENST00000389301 SF3A1Q15459 793 aaKnown RBP15.45■□□□□ 0.06
FANCA-202ENST00000389301 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.45■□□□□ 0.06
FANCA-202ENST00000389301 CCAR2Q8N163 923 aaKnown RBP15.45■□□□□ 0.06
FANCA-202ENST00000389301 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
FANCA-202ENST00000389301 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
FANCA-202ENST00000389301 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
FANCA-202ENST00000389301 ANKRD30AQ9BXX3 1397 aa15.44■□□□□ 0.06
FANCA-202ENST00000389301 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
FANCA-202ENST00000389301 RILPL2Q969X0 211 aa15.43■□□□□ 0.06
FANCA-202ENST00000389301 ATP6V1DQ9Y5K8 247 aa15.43■□□□□ 0.06
FANCA-202ENST00000389301 CGNL1Q0VF96 1302 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 BECN2A8MW95 431 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 RASSF8Q8NHQ8 419 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 E9PSI1 815 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 CHMP3Q9Y3E7 222 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 H3BQV1 296 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 HDGFP51858 240 aaKnown RBP15.42■□□□□ 0.06
FANCA-202ENST00000389301 PDE4CQ08493 712 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 IFFO2Q5TF58 517 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 ZKSCAN2Q63HK3 967 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 GGT6Q6P531 493 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 PANK3Q9H999 370 aa15.42■□□□□ 0.06
FANCA-202ENST00000389301 KIF3AQ9Y496 699 aa15.41■□□□□ 0.06
FANCA-202ENST00000389301 ST20-MTHFSA0A0A6YYL1 179 aa15.41■□□□□ 0.06
FANCA-202ENST00000389301 ZNF330Q9Y3S2 320 aaPredicted RBP15.4■□□□□ 0.06
FANCA-202ENST00000389301 LMOD3Q0VAK6 560 aa15.39■□□□□ 0.05
FANCA-202ENST00000389301 GPS2Q13227 327 aa15.39■□□□□ 0.05
FANCA-202ENST00000389301 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
FANCA-202ENST00000389301 CHMP4AQ9BY43 222 aa15.38■□□□□ 0.05
FANCA-202ENST00000389301 TERF2IPQ9NYB0 399 aa15.38■□□□□ 0.05
FANCA-202ENST00000389301 PAK3O75914 559 aaPredicted RBP15.38■□□□□ 0.05
FANCA-202ENST00000389301 MLECQ14165 292 aa15.38■□□□□ 0.05
FANCA-202ENST00000389301 FAM184AQ8NB25 1140 aa15.37■□□□□ 0.05
FANCA-202ENST00000389301 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
FANCA-202ENST00000389301 PES1O00541 588 aaKnown RBP15.37■□□□□ 0.05
FANCA-202ENST00000389301 TPD52L1Q16890 204 aaPredicted RBP15.35■□□□□ 0.05
FANCA-202ENST00000389301 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
FANCA-202ENST00000389301 BRPF3Q9ULD4 1205 aa15.35■□□□□ 0.05
FANCA-202ENST00000389301 TAF7LQ5H9L4 462 aa15.35■□□□□ 0.05
FANCA-202ENST00000389301 TEX35Q5T0J7 233 aa15.35■□□□□ 0.05
FANCA-202ENST00000389301 R3HCC1Q9Y3T6 440 aaKnown RBP15.35■□□□□ 0.05
FANCA-202ENST00000389301 MCTP1Q6DN14 999 aa15.34■□□□□ 0.05
FANCA-202ENST00000389301 NACADO15069 1562 aa15.34■□□□□ 0.05
FANCA-202ENST00000389301 MRE11P49959 708 aa15.33■□□□□ 0.05
FANCA-202ENST00000389301 TOMM22Q9NS69 142 aa15.33■□□□□ 0.05
FANCA-202ENST00000389301 APAF1O14727 1248 aa15.33■□□□□ 0.04
FANCA-202ENST00000389301 REC8O95072 547 aa15.33■□□□□ 0.04
FANCA-202ENST00000389301 IL27Q8NEV9 243 aa15.33■□□□□ 0.04
FANCA-202ENST00000389301 TSR1Q2NL82 804 aaKnown RBP15.33■□□□□ 0.04
FANCA-202ENST00000389301 USP47Q96K76 1375 aa15.32■□□□□ 0.04
FANCA-202ENST00000389301 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
FANCA-202ENST00000389301 HOMER1Q86YM7 354 aa15.31■□□□□ 0.04
FANCA-202ENST00000389301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.31■□□□□ 0.04
FANCA-202ENST00000389301 TPM1P09493 284 aa15.31■□□□□ 0.04
FANCA-202ENST00000389301 CSB-PGBD3P0DP91 1061 aa15.31■□□□□ 0.04
FANCA-202ENST00000389301 C22orf23Q9BZE7 217 aa15.31■□□□□ 0.04
FANCA-202ENST00000389301 CCDC70Q6NSX1 233 aa15.3■□□□□ 0.04
FANCA-202ENST00000389301 NUCB2P80303 420 aa15.3■□□□□ 0.04
FANCA-202ENST00000389301 NASPP49321 788 aaPredicted RBP15.3■□□□□ 0.04
FANCA-202ENST00000389301 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
FANCA-202ENST00000389301 PATL2C9JE40 543 aaKnown RBP15.29■□□□□ 0.04
FANCA-202ENST00000389301 DZIP1LQ8IYY4 767 aaKnown RBP15.29■□□□□ 0.04
FANCA-202ENST00000389301 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.047e-8■■■■■ 26.9
FANCA-202ENST00000389301 NUTM2DQ5VT03 806 aaPredicted RBP15.29■□□□□ 0.04
FANCA-202ENST00000389301 CEP89Q96ST8 783 aa15.29■□□□□ 0.04
FANCA-202ENST00000389301 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
FANCA-202ENST00000389301 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.29■□□□□ 0.04
FANCA-202ENST00000389301 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
FANCA-202ENST00000389301 FHOD3Q2V2M9 1422 aa15.29■□□□□ 0.04
FANCA-202ENST00000389301 PKNOX2Q96KN3 472 aa15.28■□□□□ 0.04
FANCA-202ENST00000389301 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
FANCA-202ENST00000389301 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
FANCA-202ENST00000389301 TRAK1Q9UPV9 953 aa15.28■□□□□ 0.04
FANCA-202ENST00000389301 ANO2Q9NQ90 1003 aa15.27■□□□□ 0.04
FANCA-202ENST00000389301 MAP7D2Q96T17 732 aa15.27■□□□□ 0.04
FANCA-202ENST00000389301 TPM2P07951 284 aa15.27■□□□□ 0.03
FANCA-202ENST00000389301 CHMP4CQ96CF2 233 aa15.27■□□□□ 0.03
FANCA-202ENST00000389301 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
FANCA-202ENST00000389301 TRAK2O60296 914 aa15.26■□□□□ 0.03
FANCA-202ENST00000389301 MTERF4Q7Z6M4 381 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms