RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 TCERG1O14776 1098 aaKnown RBP15.37■□□□□ 0.05
KCNQ3-201ENST00000388996 CCDC9Q9Y3X0 531 aaKnown RBP15.36■□□□□ 0.05
KCNQ3-201ENST00000388996 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
KCNQ3-201ENST00000388996 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
KCNQ3-201ENST00000388996 AMPHP49418 695 aa15.34■□□□□ 0.05
KCNQ3-201ENST00000388996 CGNL1Q0VF96 1302 aa15.34■□□□□ 0.05
KCNQ3-201ENST00000388996 MFAP1P55081 439 aaKnown RBP15.34■□□□□ 0.05
KCNQ3-201ENST00000388996 TPM4P67936 248 aa15.34■□□□□ 0.05
KCNQ3-201ENST00000388996 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
KCNQ3-201ENST00000388996 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
KCNQ3-201ENST00000388996 DEKP35659 375 aaKnown RBP15.34■□□□□ 0.05
KCNQ3-201ENST00000388996 CSPP1Q1MSJ5 1256 aa15.33■□□□□ 0.04
KCNQ3-201ENST00000388996 HNRNPMP52272 730 aaKnown RBP eCLIP15.33■□□□□ 0.04
KCNQ3-201ENST00000388996 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
KCNQ3-201ENST00000388996 SLC4A10Q6U841 1118 aa15.32■□□□□ 0.04
KCNQ3-201ENST00000388996 LTV1Q96GA3 475 aaPredicted RBP15.32■□□□□ 0.04
KCNQ3-201ENST00000388996 PHF14O94880 888 aa15.31■□□□□ 0.04
KCNQ3-201ENST00000388996 PDE3BQ13370 1112 aa15.31■□□□□ 0.04
KCNQ3-201ENST00000388996 GZF1Q9H116 711 aaPredicted RBP15.3■□□□□ 0.04
KCNQ3-201ENST00000388996 KIF16BQ96L93 1317 aa15.3■□□□□ 0.04
KCNQ3-201ENST00000388996 RBM19Q9Y4C8 960 aaKnown RBP15.3■□□□□ 0.04
KCNQ3-201ENST00000388996 USP47Q96K76 1375 aa15.3■□□□□ 0.04
KCNQ3-201ENST00000388996 L3MBTL2Q969R5 705 aa15.29■□□□□ 0.04
KCNQ3-201ENST00000388996 G3V3G9 751 aa15.29■□□□□ 0.04
KCNQ3-201ENST00000388996 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
KCNQ3-201ENST00000388996 ST18O60284 1047 aa15.28■□□□□ 0.04
KCNQ3-201ENST00000388996 MYBBP1AQ9BQG0 1328 aaKnown RBP15.28■□□□□ 0.04
KCNQ3-201ENST00000388996 GTF2E1P29083 439 aaPredicted RBP15.27■□□□□ 0.03
KCNQ3-201ENST00000388996 EVC2Q86UK5 1308 aa15.27■□□□□ 0.03
KCNQ3-201ENST00000388996 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.03
KCNQ3-201ENST00000388996 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
KCNQ3-201ENST00000388996 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
KCNQ3-201ENST00000388996 KIF3AQ9Y496 699 aa15.25■□□□□ 0.03
KCNQ3-201ENST00000388996 COG3Q96JB2 828 aa15.25■□□□□ 0.03
KCNQ3-201ENST00000388996 VPS53Q5VIR6 699 aa15.25■□□□□ 0.03
KCNQ3-201ENST00000388996 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
KCNQ3-201ENST00000388996 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
KCNQ3-201ENST00000388996 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
KCNQ3-201ENST00000388996 PTPRGP23470 1445 aa15.24■□□□□ 0.03
KCNQ3-201ENST00000388996 FRAT2O75474 233 aaPredicted RBP15.24■□□□□ 0.03
KCNQ3-201ENST00000388996 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
KCNQ3-201ENST00000388996 RRP7AQ9Y3A4 280 aaKnown RBP15.23■□□□□ 0.03
KCNQ3-201ENST00000388996 SUPT6HQ7KZ85 1726 aaKnown RBP15.23■□□□□ 0.03
KCNQ3-201ENST00000388996 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
KCNQ3-201ENST00000388996 TRAK1Q9UPV9 953 aa15.22■□□□□ 0.03
KCNQ3-201ENST00000388996 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
KCNQ3-201ENST00000388996 KIF21BO75037 1637 aa15.21■□□□□ 0.02
KCNQ3-201ENST00000388996 NUTM2FA1L443 756 aa15.2■□□□□ 0.02
KCNQ3-201ENST00000388996 PANK3Q9H999 370 aa15.2■□□□□ 0.02
KCNQ3-201ENST00000388996 DDX11L8A8MPP1 907 aa15.2■□□□□ 0.02
KCNQ3-201ENST00000388996 GOLGA6L1Q8N7Z2 621 aa15.19■□□□□ 0.02
KCNQ3-201ENST00000388996 CFAP65Q6ZU64 1925 aaKnown RBP15.19■□□□□ 0.02
KCNQ3-201ENST00000388996 ARHGAP5Q13017 1502 aa15.19■□□□□ 0.02
KCNQ3-201ENST00000388996 MYOM3Q5VTT5 1437 aa15.19■□□□□ 0.02
KCNQ3-201ENST00000388996 JPH4Q96JJ6 628 aa15.18■□□□□ 0.02
KCNQ3-201ENST00000388996 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
KCNQ3-201ENST00000388996 ST20-MTHFSA0A0A6YYL1 179 aa15.18■□□□□ 0.02
KCNQ3-201ENST00000388996 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
KCNQ3-201ENST00000388996 H3BQV1 296 aa15.18■□□□□ 0.02
KCNQ3-201ENST00000388996 IFFO2Q5TF58 517 aa15.18■□□□□ 0.02
KCNQ3-201ENST00000388996 CREBRFQ8IUR6 639 aa15.18■□□□□ 0.02
KCNQ3-201ENST00000388996 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 ROCK1Q13464 1354 aa15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 TTC5Q8N0Z6 440 aa15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 PRM3Q9NNZ6 103 aa15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 TPM3P06753 285 aa15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 MARCH6O60337 910 aa15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 A0A0U1RQG5 324 aaPredicted RBP15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 PDE4CQ08493 712 aa15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 ARID3AQ99856 593 aa15.17■□□□□ 0.02
KCNQ3-201ENST00000388996 ZBED9Q6R2W3 1325 aa15.16■□□□□ 0.02
KCNQ3-201ENST00000388996 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
KCNQ3-201ENST00000388996 DIAPH3Q9NSV4 1193 aa15.16■□□□□ 0.02
KCNQ3-201ENST00000388996 HECW1Q76N89 1606 aa15.16■□□□□ 0.02
KCNQ3-201ENST00000388996 E9PSI1 815 aa15.16■□□□□ 0.02
KCNQ3-201ENST00000388996 SF3A1Q15459 793 aaKnown RBP15.16■□□□□ 0.02
KCNQ3-201ENST00000388996 ZKSCAN2Q63HK3 967 aa15.16■□□□□ 0.02
KCNQ3-201ENST00000388996 AKAP17AQ02040 695 aaKnown RBP15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 NEXNQ0ZGT2 675 aa15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 MINK1Q8N4C8 1332 aaPredicted RBP15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 MIA2Q96PC5 1412 aa15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 ATP6V1DQ9Y5K8 247 aa15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 FOXD4L5Q5VV16 416 aaPredicted RBP15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 FOXD4L4Q8WXT5 416 aaPredicted RBP15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 CENPQQ7L2Z9 268 aaPredicted RBP15.15■□□□□ 0.02
KCNQ3-201ENST00000388996 NOL10Q9BSC4 688 aaKnown RBP15.14■□□□□ 0.01
KCNQ3-201ENST00000388996 USP35Q9P2H5 1018 aa15.14■□□□□ 0.01
KCNQ3-201ENST00000388996 TCEAL9Q9UHQ7 104 aa15.14■□□□□ 0.01
KCNQ3-201ENST00000388996 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
KCNQ3-201ENST00000388996 EVA1CP58658 441 aa15.14■□□□□ 0.01
KCNQ3-201ENST00000388996 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
KCNQ3-201ENST00000388996 TEFQ10587 303 aa15.13■□□□□ 0.01
KCNQ3-201ENST00000388996 RILPL2Q969X0 211 aa15.13■□□□□ 0.01
KCNQ3-201ENST00000388996 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
KCNQ3-201ENST00000388996 DHX57Q6P158 1386 aaKnown RBP15.12■□□□□ 0.01
KCNQ3-201ENST00000388996 FGD6Q6ZV73 1430 aa15.12■□□□□ 0.01
KCNQ3-201ENST00000388996 REC8O95072 547 aa15.11■□□□□ 0.01
KCNQ3-201ENST00000388996 CEP89Q96ST8 783 aa15.11■□□□□ 0.01
KCNQ3-201ENST00000388996 TPD52L1Q16890 204 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms