RNA–Protein interactions for RNA: ENST00000384559.1

RNU6-1235P-201, Transcript of RNA, U6 small nuclear 1235, pseudogene, humanhuman

BASIC

Gene RNU6-1235P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1235P-201ENST00000384559 HIC1Q14526 733 aa4.55□□□□□ -1.68
RNU6-1235P-201ENST00000384559 PPP4R3BQ5MIZ7 849 aa4.55□□□□□ -1.68
RNU6-1235P-201ENST00000384559 C6orf132Q5T0Z8 1188 aa4.55□□□□□ -1.68
RNU6-1235P-201ENST00000384559 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1235P-201ENST00000384559 KRI1Q8N9T8 703 aaKnown RBP4.55□□□□□ -1.68
RNU6-1235P-201ENST00000384559 FBXW7Q969H0 707 aa4.55□□□□□ -1.68
RNU6-1235P-201ENST00000384559 CCDC102AQ96A19 550 aa4.55□□□□□ -1.68
RNU6-1235P-201ENST00000384559 BRPF1P55201 1214 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1235P-201ENST00000384559 MAP2K5Q13163 448 aa4.54□□□□□ -1.68
RNU6-1235P-201ENST00000384559 FAM161AQ3B820 660 aa4.54□□□□□ -1.68
RNU6-1235P-201ENST00000384559 PADI6Q6TGC4 694 aa4.54□□□□□ -1.68
RNU6-1235P-201ENST00000384559 FAM163AQ96GL9 167 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1235P-201ENST00000384559 POTEB3A0JP26 581 aa4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 EMP3P54852 163 aa4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 VARS2Q5ST30 1063 aaKnown RBP4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 POTEBQ6S5H4 581 aa4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 POTEEQ6S8J3 1075 aa4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 AK7Q96M32 723 aa4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 BCL2L12Q9HB09 334 aa4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 FAM198AQ9UFP1 575 aa4.53□□□□□ -1.68
RNU6-1235P-201ENST00000384559 ERBB3P21860 1342 aa4.52□□□□□ -1.69
RNU6-1235P-201ENST00000384559 IRF6O14896 467 aa4.52□□□□□ -1.69
RNU6-1235P-201ENST00000384559 TRIM66O15016 1216 aa4.52□□□□□ -1.69
RNU6-1235P-201ENST00000384559 NEUROD2Q15784 382 aa4.52□□□□□ -1.69
RNU6-1235P-201ENST00000384559 KCNK17Q96T54 332 aa4.52□□□□□ -1.69
RNU6-1235P-201ENST00000384559 GPBP1L1Q9HC44 474 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1235P-201ENST00000384559 MINK1Q8N4C8 1332 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PSDA5PKW4 1024 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 FAM205CA6NFA0 338 aa4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 C3orf80F5H4A9 247 aa4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PTPREP23469 700 aa4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PSEN2P49810 448 aa4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PROX2Q3B8N5 592 aa4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 NLRP7Q8WX94 980 aa4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 AXIN2Q9Y2T1 843 aa4.51□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PPP1R3GB7ZBB8 358 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PRSS12P56730 875 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PDE4DQ08499 809 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 DMRTA1Q5VZB9 504 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 TTC13Q8NBP0 860 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 CDCA7LQ96GN5 454 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 HS3ST6Q96QI5 342 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PHOX2BQ99453 314 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 TSKSQ9UJT2 592 aa4.5□□□□□ -1.69
RNU6-1235P-201ENST00000384559 CERKQ8TCT0 537 aa4.49□□□□□ -1.69
RNU6-1235P-201ENST00000384559 AMHR2Q16671 573 aa4.48□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PARP9Q8IXQ6 854 aa4.48□□□□□ -1.69
RNU6-1235P-201ENST00000384559 ZBED2Q9BTP6 218 aa4.48□□□□□ -1.69
RNU6-1235P-201ENST00000384559 REPIN1Q9BWE0 567 aaKnown RBP4.48□□□□□ -1.69
RNU6-1235P-201ENST00000384559 RBM27Q9P2N5 1060 aaKnown RBP4.48□□□□□ -1.69
RNU6-1235P-201ENST00000384559 ADGRG1Q9Y653 693 aa4.48□□□□□ -1.69
RNU6-1235P-201ENST00000384559 TRIM6-TRIM34B2RNG4 842 aa4.47□□□□□ -1.69
RNU6-1235P-201ENST00000384559 SMAPO00193 183 aa4.47□□□□□ -1.69
RNU6-1235P-201ENST00000384559 METTL3Q86U44 580 aaKnown RBP4.47□□□□□ -1.69
RNU6-1235P-201ENST00000384559 ZNF687Q8N1G0 1237 aa4.47□□□□□ -1.69
RNU6-1235P-201ENST00000384559 PXYLP1Q8TE99 480 aa4.47□□□□□ -1.69
RNU6-1235P-201ENST00000384559 KDM4CQ9H3R0 1056 aa4.47□□□□□ -1.69
RNU6-1235P-201ENST00000384559 ARHGAP33O14559 1287 aa4.46□□□□□ -1.7
RNU6-1235P-201ENST00000384559 MDM2Q00987 491 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1235P-201ENST00000384559 TTLL12Q14166 644 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1235P-201ENST00000384559 NUDT18Q6ZVK8 323 aa4.46□□□□□ -1.7
RNU6-1235P-201ENST00000384559 PNMA3Q9UL41 463 aa4.46□□□□□ -1.7
RNU6-1235P-201ENST00000384559 EYA1Q99502 592 aa4.45□□□□□ -1.7
RNU6-1235P-201ENST00000384559 TMUB1Q9BVT8 246 aa4.45□□□□□ -1.7
RNU6-1235P-201ENST00000384559 KIAA1468Q9P260 1216 aa4.45□□□□□ -1.7
RNU6-1235P-201ENST00000384559 RCCD1A6NED2 376 aa4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 NBPF26B4DH59 902 aa4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 MS4A1P11836 297 aa4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 PBX2P40425 430 aa4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 GIGYF2Q6Y7W6 1299 aaKnown RBP4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 TATDN2Q93075 761 aa4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 KCNH8Q96L42 1107 aa4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 FAM117AQ9C073 453 aa4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 SEPT9Q9UHD8 586 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1235P-201ENST00000384559 OATP04181 439 aa4.43□□□□□ -1.7
RNU6-1235P-201ENST00000384559 IL27Q8NEV9 243 aa4.43□□□□□ -1.7
RNU6-1235P-201ENST00000384559 RBM46Q8TBY0 533 aaKnown RBP4.43□□□□□ -1.7
RNU6-1235P-201ENST00000384559 VPS9D1Q9Y2B5 631 aa4.43□□□□□ -1.7
RNU6-1235P-201ENST00000384559 PLEKHG3A1L390 1219 aa4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 ONECUT3O60422 494 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 CLCN1P35523 988 aa4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 LSM11P83369 360 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 PACS2Q86VP3 889 aa4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 SLC4A5Q9BY07 1137 aa4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 GPCPD1Q9NPB8 672 aa4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 FAM217BQ9NTX9 383 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1235P-201ENST00000384559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.41□□□□□ -1.7
RNU6-1235P-201ENST00000384559 DNAJB2P25686 324 aa4.41□□□□□ -1.7
RNU6-1235P-201ENST00000384559 TMEM132AQ24JP5 1023 aa4.41□□□□□ -1.7
RNU6-1235P-201ENST00000384559 KRTAP3-3Q9BYR6 98 aa4.41□□□□□ -1.7
RNU6-1235P-201ENST00000384559 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
RNU6-1235P-201ENST00000384559 RABGEF1Q9UJ41 708 aa4.41□□□□□ -1.7
RNU6-1235P-201ENST00000384559 SSTR3P32745 418 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1235P-201ENST00000384559 SWT1Q5T5J6 900 aaKnown RBP4.4□□□□□ -1.71
RNU6-1235P-201ENST00000384559 ADGRD1Q6QNK2 874 aa4.4□□□□□ -1.71
RNU6-1235P-201ENST00000384559 TMEM134Q9H6X4 195 aa4.4□□□□□ -1.71
RNU6-1235P-201ENST00000384559 POTEMA6NI47 508 aa4.39□□□□□ -1.71
RNU6-1235P-201ENST00000384559 DDX11L8A8MPP1 907 aa4.39□□□□□ -1.71
RNU6-1235P-201ENST00000384559 BHMG1C9JSJ3 638 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1235P-201ENST00000384559 TK2O00142 265 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms