RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 NFKBIBQ15653 356 aa15.28■□□□□ 0.04
SRGAP3-202ENST00000383836 CHMP5Q9NZZ3 219 aa15.27■□□□□ 0.04
SRGAP3-202ENST00000383836 RRP1P56182 461 aaKnown RBP15.27■□□□□ 0.04
SRGAP3-202ENST00000383836 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.04
SRGAP3-202ENST00000383836 CCDC39Q9UFE4 941 aa15.27■□□□□ 0.03
SRGAP3-202ENST00000383836 SF3A1Q15459 793 aaKnown RBP15.27■□□□□ 0.03
SRGAP3-202ENST00000383836 ACBD3Q9H3P7 528 aa15.26■□□□□ 0.03
SRGAP3-202ENST00000383836 NASPP49321 788 aaPredicted RBP15.26■□□□□ 0.03
SRGAP3-202ENST00000383836 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
SRGAP3-202ENST00000383836 HOMER1Q86YM7 354 aa15.26■□□□□ 0.03
SRGAP3-202ENST00000383836 H3BQV1 296 aa15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 RRP9O43818 475 aaKnown RBP15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 IFFO2Q5TF58 517 aa15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 AK7Q96M32 723 aa15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 TPD52L1Q16890 204 aaPredicted RBP15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 CEP89Q96ST8 783 aa15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 VPS8Q8N3P4 1428 aa15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 PRM3Q9NNZ6 103 aa15.25■□□□□ 0.03
SRGAP3-202ENST00000383836 RRP12Q5JTH9 1297 aaKnown RBP15.24■□□□□ 0.03
SRGAP3-202ENST00000383836 NLRP13Q86W25 1043 aa15.24■□□□□ 0.03
SRGAP3-202ENST00000383836 RASSF8Q8NHQ8 419 aa15.23■□□□□ 0.03
SRGAP3-202ENST00000383836 HSP90B2PQ58FF3 399 aa15.23■□□□□ 0.03
SRGAP3-202ENST00000383836 KIF15Q9NS87 1388 aa15.23■□□□□ 0.03
SRGAP3-202ENST00000383836 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
SRGAP3-202ENST00000383836 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
SRGAP3-202ENST00000383836 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
SRGAP3-202ENST00000383836 IFT57Q9NWB7 429 aa15.22■□□□□ 0.03
SRGAP3-202ENST00000383836 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
SRGAP3-202ENST00000383836 RUFY1Q96T51 708 aa15.22■□□□□ 0.03
SRGAP3-202ENST00000383836 BRPF3Q9ULD4 1205 aa15.21■□□□□ 0.03
SRGAP3-202ENST00000383836 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
SRGAP3-202ENST00000383836 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
SRGAP3-202ENST00000383836 CLUAP1Q96AJ1 413 aa15.21■□□□□ 0.03
SRGAP3-202ENST00000383836 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
SRGAP3-202ENST00000383836 PDE4CQ08493 712 aa15.2■□□□□ 0.02
SRGAP3-202ENST00000383836 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
SRGAP3-202ENST00000383836 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
SRGAP3-202ENST00000383836 SRPK2P78362 688 aaKnown RBP15.2■□□□□ 0.02
SRGAP3-202ENST00000383836 TAF3Q5VWG9 929 aa15.2■□□□□ 0.02
SRGAP3-202ENST00000383836 MNS1Q8NEH6 495 aa15.2■□□□□ 0.02
SRGAP3-202ENST00000383836 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
SRGAP3-202ENST00000383836 ISY1Q9ULR0 285 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-202ENST00000383836 EXOC6Q8TAG9 804 aa15.19■□□□□ 0.02
SRGAP3-202ENST00000383836 HMGN5P82970 282 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-202ENST00000383836 EIF3AQ14152 1382 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-202ENST00000383836 CRBNQ96SW2 442 aa15.19■□□□□ 0.02
SRGAP3-202ENST00000383836 H0YHG0 523 aa15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 NUCB2P80303 420 aa15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 HDAC5Q9UQL6 1122 aa15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 KANK1Q14678 1352 aa15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 MYBBP1AQ9BQG0 1328 aaKnown RBP15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 CHMP4AQ9BY43 222 aa15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 FAM184AQ8NB25 1140 aa15.18■□□□□ 0.02
SRGAP3-202ENST00000383836 CDR1P51861 262 aa15.17■□□□□ 0.02
SRGAP3-202ENST00000383836 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
SRGAP3-202ENST00000383836 MCTP1Q6DN14 999 aa15.17■□□□□ 0.02
SRGAP3-202ENST00000383836 STK31Q9BXU1 1019 aa15.17■□□□□ 0.02
SRGAP3-202ENST00000383836 REC8O95072 547 aa15.16■□□□□ 0.02
SRGAP3-202ENST00000383836 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
SRGAP3-202ENST00000383836 SPAG9O60271 1321 aaKnown RBP15.16■□□□□ 0.02
SRGAP3-202ENST00000383836 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
SRGAP3-202ENST00000383836 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
SRGAP3-202ENST00000383836 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
SRGAP3-202ENST00000383836 LEKR1Q6ZMV7 388 aa15.15■□□□□ 0.02
SRGAP3-202ENST00000383836 PLIN1O60240 522 aa15.15■□□□□ 0.02
SRGAP3-202ENST00000383836 RBM10P98175 930 aaKnown RBP15.14■□□□□ 0.01
SRGAP3-202ENST00000383836 SASS6Q6UVJ0 657 aa15.14■□□□□ 0.01
SRGAP3-202ENST00000383836 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
SRGAP3-202ENST00000383836 TMX4Q9H1E5 349 aaPredicted RBP15.13■□□□□ 0.01
SRGAP3-202ENST00000383836 ANKRD20A12PQ8NF67 263 aa15.13■□□□□ 0.01
SRGAP3-202ENST00000383836 HOOK1Q9UJC3 728 aaKnown RBP15.13■□□□□ 0.01
SRGAP3-202ENST00000383836 HDGFL2Q7Z4V5 671 aaPredicted RBP15.13■□□□□ 0.01
SRGAP3-202ENST00000383836 TAF7LQ5H9L4 462 aa15.12■□□□□ 0.01
SRGAP3-202ENST00000383836 GORABQ5T7V8 394 aa15.12■□□□□ 0.01
SRGAP3-202ENST00000383836 ERCC4Q92889 916 aaPredicted RBP15.12■□□□□ 0.01
SRGAP3-202ENST00000383836 TRAK2O60296 914 aa15.12■□□□□ 0.01
SRGAP3-202ENST00000383836 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
SRGAP3-202ENST00000383836 E9PSI1 815 aa15.11■□□□□ 0.01
SRGAP3-202ENST00000383836 FMN1Q68DA7 1419 aa15.1■□□□□ 0.01
SRGAP3-202ENST00000383836 FOXD1Q16676 465 aa15.1■□□□□ 0.01
SRGAP3-202ENST00000383836 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
SRGAP3-202ENST00000383836 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
SRGAP3-202ENST00000383836 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
SRGAP3-202ENST00000383836 LETM1O95202 739 aaPredicted RBP15.09■□□□□ 0.01
SRGAP3-202ENST00000383836 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
SRGAP3-202ENST00000383836 NAT10Q9H0A0 1025 aaKnown RBP15.09■□□□□ 0.01
SRGAP3-202ENST00000383836 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
SRGAP3-202ENST00000383836 PKD2Q13563 968 aa15.08■□□□□ 0.01
SRGAP3-202ENST00000383836 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0.01
SRGAP3-202ENST00000383836 CHMP3Q9Y3E7 222 aa15.08■□□□□ 0.01
SRGAP3-202ENST00000383836 C22orf23Q9BZE7 217 aa15.08■□□□□ 0
SRGAP3-202ENST00000383836 SOX12O15370 315 aa15.07■□□□□ 0
SRGAP3-202ENST00000383836 UQCRHLA0A096LP55 91 aa15.06■□□□□ 0
SRGAP3-202ENST00000383836 UQCRHP07919 91 aa15.06■□□□□ 0
SRGAP3-202ENST00000383836 PCMTD1Q96MG8 357 aaPredicted RBP15.06■□□□□ 0
SRGAP3-202ENST00000383836 PRKRIP1Q9H875 184 aaPredicted RBP15.06■□□□□ 0
SRGAP3-202ENST00000383836 CCP110O43303 1012 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms