RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
NEK4-202ENST00000383721 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
NEK4-202ENST00000383721 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
NEK4-202ENST00000383721 KDM5CP41229 1560 aa19.25■□□□□ 0.67
NEK4-202ENST00000383721 CNTLNQ9NXG0 1405 aa19.24■□□□□ 0.67
NEK4-202ENST00000383721 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
NEK4-202ENST00000383721 NCOA1Q15788 1441 aa19.24■□□□□ 0.67
NEK4-202ENST00000383721 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
NEK4-202ENST00000383721 ZFYVE16Q7Z3T8 1539 aa19.22■□□□□ 0.67
NEK4-202ENST00000383721 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
NEK4-202ENST00000383721 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
NEK4-202ENST00000383721 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
NEK4-202ENST00000383721 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
NEK4-202ENST00000383721 INO80Q9ULG1 1556 aaPredicted RBP19.2■□□□□ 0.66
NEK4-202ENST00000383721 KIDINS220Q9ULH0 1771 aa19.2■□□□□ 0.66
NEK4-202ENST00000383721 HECW2Q9P2P5 1572 aa19.2■□□□□ 0.66
NEK4-202ENST00000383721 PZPP20742 1482 aa19.19■□□□□ 0.66
NEK4-202ENST00000383721 MLH3Q9UHC1 1453 aa19.19■□□□□ 0.66
NEK4-202ENST00000383721 MAST1Q9Y2H9 1570 aa19.18■□□□□ 0.66
NEK4-202ENST00000383721 ZMYM4Q5VZL5 1548 aa19.18■□□□□ 0.66
NEK4-202ENST00000383721 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
NEK4-202ENST00000383721 CCDC184Q52MB2 194 aa19.17■□□□□ 0.66
NEK4-202ENST00000383721 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
NEK4-202ENST00000383721 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
NEK4-202ENST00000383721 ANKRD30AQ9BXX3 1397 aa19.16■□□□□ 0.66
NEK4-202ENST00000383721 KIF15Q9NS87 1388 aa19.16■□□□□ 0.66
NEK4-202ENST00000383721 ADGBQ8N7X0 1667 aa19.15■□□□□ 0.66
NEK4-202ENST00000383721 ABCA6Q8N139 1617 aa19.15■□□□□ 0.66
NEK4-202ENST00000383721 PRKRIP1Q9H875 184 aaPredicted RBP19.15■□□□□ 0.66
NEK4-202ENST00000383721 DIP2CQ9Y2E4 1556 aa19.13■□□□□ 0.65
NEK4-202ENST00000383721 KIF7Q2M1P5 1343 aa19.13■□□□□ 0.65
NEK4-202ENST00000383721 PLXNC1O60486 1568 aa19.12■□□□□ 0.65
NEK4-202ENST00000383721 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
NEK4-202ENST00000383721 ARHGEF40Q8TER5 1519 aa19.09■□□□□ 0.65
NEK4-202ENST00000383721 A2MP01023 1474 aa19.07■□□□□ 0.64
NEK4-202ENST00000383721 ANKRD50Q9ULJ7 1429 aa19.07■□□□□ 0.64
NEK4-202ENST00000383721 SIGLEC1Q9BZZ2 1709 aa19.07■□□□□ 0.64
NEK4-202ENST00000383721 ATP10AO60312 1499 aa19.06■□□□□ 0.64
NEK4-202ENST00000383721 PKD2Q13563 968 aa19.06■□□□□ 0.64
NEK4-202ENST00000383721 DUOX2Q9NRD8 1548 aa19.06■□□□□ 0.64
NEK4-202ENST00000383721 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
NEK4-202ENST00000383721 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
NEK4-202ENST00000383721 FAM9BQ8IZU0 186 aa19.04■□□□□ 0.64
NEK4-202ENST00000383721 IRX6P78412 446 aaPredicted RBP19.03■□□□□ 0.64
NEK4-202ENST00000383721 RBM19Q9Y4C8 960 aaKnown RBP19.03■□□□□ 0.64
NEK4-202ENST00000383721 POLR1AO95602 1720 aaPredicted RBP19.02■□□□□ 0.64
NEK4-202ENST00000383721 KIF3BO15066 747 aa19.02■□□□□ 0.64
NEK4-202ENST00000383721 ERBINQ96RT1 1412 aa19.01■□□□□ 0.63
NEK4-202ENST00000383721 USP47Q96K76 1375 aa19■□□□□ 0.63
NEK4-202ENST00000383721 ZNF326Q5BKZ1 582 aaKnown RBP18.99■□□□□ 0.63
NEK4-202ENST00000383721 ZBED9Q6R2W3 1325 aa18.99■□□□□ 0.63
NEK4-202ENST00000383721 ARID4BQ4LE39 1312 aaPredicted RBP18.98■□□□□ 0.63
NEK4-202ENST00000383721 NUP155O75694 1391 aa18.98■□□□□ 0.63
NEK4-202ENST00000383721 MLECQ14165 292 aa18.97■□□□□ 0.63
NEK4-202ENST00000383721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■■□□□ 11.6
NEK4-202ENST00000383721 REREQ9P2R6 1566 aa18.97■□□□□ 0.63
NEK4-202ENST00000383721 GGT6Q6P531 493 aa18.97■□□□□ 0.63
NEK4-202ENST00000383721 ANP32EQ9BTT0 268 aa18.96■□□□□ 0.63
NEK4-202ENST00000383721 BCORL1Q5H9F3 1711 aa18.96■□□□□ 0.63
NEK4-202ENST00000383721 UHRF1BP1Q6BDS2 1440 aa18.95■□□□□ 0.62
NEK4-202ENST00000383721 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
NEK4-202ENST00000383721 EIF2AK4Q9P2K8 1649 aaKnown RBP18.94■□□□□ 0.62
NEK4-202ENST00000383721 AGLP35573 1532 aa18.93■□□□□ 0.62
NEK4-202ENST00000383721 MROH1Q8NDA8 1641 aa18.92■□□□□ 0.62
NEK4-202ENST00000383721 KDM5DQ9BY66 1539 aa18.92■□□□□ 0.62
NEK4-202ENST00000383721 RALGAPBQ86X10 1494 aa18.91■□□□□ 0.62
NEK4-202ENST00000383721 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
NEK4-202ENST00000383721 DEPDC5O75140 1603 aa18.89■□□□□ 0.61
NEK4-202ENST00000383721 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.61
NEK4-202ENST00000383721 UNC13BO14795 1591 aa18.89■□□□□ 0.61
NEK4-202ENST00000383721 PPP4R2Q9NY27 417 aa18.89■□□□□ 0.61
NEK4-202ENST00000383721 CNGB1Q14028 1251 aaPredicted RBP18.87■□□□□ 0.61
NEK4-202ENST00000383721 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
NEK4-202ENST00000383721 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
NEK4-202ENST00000383721 KDM2AQ9Y2K7 1162 aa18.84■□□□□ 0.61
NEK4-202ENST00000383721 FAM135AQ9P2D6 1515 aa18.84■□□□□ 0.61
NEK4-202ENST00000383721 WASHC2CQ9Y4E1 1318 aa18.84■□□□□ 0.61
NEK4-202ENST00000383721 ROCK2O75116 1388 aaKnown RBP18.84■□□□□ 0.61
NEK4-202ENST00000383721 VWDEQ8N2E2 1590 aa18.83■□□□□ 0.61
NEK4-202ENST00000383721 DCAF11Q8TEB1 546 aa18.82■□□□□ 0.6
NEK4-202ENST00000383721 KANK1Q14678 1352 aa18.82■□□□□ 0.6
NEK4-202ENST00000383721 CEP152O94986 1710 aa18.82■□□□□ 0.6
NEK4-202ENST00000383721 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
NEK4-202ENST00000383721 ABCC3O15438 1527 aa18.82■□□□□ 0.6
NEK4-202ENST00000383721 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
NEK4-202ENST00000383721 SMG6Q86US8 1419 aaKnown RBP18.81■□□□□ 0.6
NEK4-202ENST00000383721 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
NEK4-202ENST00000383721 CLTCQ00610 1675 aaKnown RBP18.78■□□□□ 0.6
NEK4-202ENST00000383721 B4GALNT3Q6L9W6 998 aa18.78■□□□□ 0.6
NEK4-202ENST00000383721 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.59
NEK4-202ENST00000383721 MADDQ8WXG6 1647 aa18.76■□□□□ 0.59
NEK4-202ENST00000383721 MSH5O43196 834 aa18.76■□□□□ 0.59
NEK4-202ENST00000383721 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
NEK4-202ENST00000383721 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
NEK4-202ENST00000383721 LMTK2Q8IWU2 1503 aa18.75■□□□□ 0.59
NEK4-202ENST00000383721 FANCIQ9NVI1 1328 aa18.75■□□□□ 0.59
NEK4-202ENST00000383721 TMC1Q8TDI8 760 aa18.75■□□□□ 0.59
NEK4-202ENST00000383721 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
NEK4-202ENST00000383721 FER1L4A9Z1Z3 1794 aa18.74■□□□□ 0.59
NEK4-202ENST00000383721 ADAMTSL3P82987 1691 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms