RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 IGF1RP08069 1367 aa14.37□□□□□ -0.11
THUMPD1-201ENST00000381337 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
THUMPD1-201ENST00000381337 GOLGA6L4A6NEF3 574 aa14.36□□□□□ -0.11
THUMPD1-201ENST00000381337 FAM13BQ9NYF5 915 aa14.35□□□□□ -0.11
THUMPD1-201ENST00000381337 APBB1O00213 710 aa14.35□□□□□ -0.11
THUMPD1-201ENST00000381337 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
THUMPD1-201ENST00000381337 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
THUMPD1-201ENST00000381337 DRC7Q8IY82 874 aa14.34□□□□□ -0.11
THUMPD1-201ENST00000381337 RRP7AQ9Y3A4 280 aaKnown RBP14.34□□□□□ -0.11
THUMPD1-201ENST00000381337 NBPF8Q3BBV2 869 aa14.33□□□□□ -0.12
THUMPD1-201ENST00000381337 TRAK2O60296 914 aa14.32□□□□□ -0.12
THUMPD1-201ENST00000381337 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
THUMPD1-201ENST00000381337 NRDCO43847 1150 aa14.32□□□□□ -0.12
THUMPD1-201ENST00000381337 GOLGA6L6A8MZA4 724 aa14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 C22orf23Q9BZE7 217 aa14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 POGKQ9P215 609 aa14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 NGEFQ8N5V2 710 aa14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 ESF1Q9H501 851 aaKnown RBP14.3□□□□□ -0.12
THUMPD1-201ENST00000381337 ADAMTS8Q9UP79 889 aa14.29□□□□□ -0.12
THUMPD1-201ENST00000381337 ERICH3Q5RHP9 1530 aa14.29□□□□□ -0.12
THUMPD1-201ENST00000381337 KCNJ4P48050 445 aa14.29□□□□□ -0.12
THUMPD1-201ENST00000381337 ST18O60284 1047 aa14.28□□□□□ -0.12
THUMPD1-201ENST00000381337 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
THUMPD1-201ENST00000381337 PRXQ9BXM0 1461 aa14.27□□□□□ -0.13
THUMPD1-201ENST00000381337 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.13
THUMPD1-201ENST00000381337 PANK1Q8TE04 598 aa14.27□□□□□ -0.13
THUMPD1-201ENST00000381337 EIF3AQ14152 1382 aaKnown RBP14.26□□□□□ -0.13
THUMPD1-201ENST00000381337 C11orf95C9JLR9 678 aaPredicted RBP14.26□□□□□ -0.13
THUMPD1-201ENST00000381337 HNRNPMP52272 730 aaKnown RBP eCLIP14.26□□□□□ -0.13
THUMPD1-201ENST00000381337 ANKRD45Q5TZF3 282 aa14.26□□□□□ -0.13
THUMPD1-201ENST00000381337 FOXD4L5Q5VV16 416 aaPredicted RBP14.26□□□□□ -0.13
THUMPD1-201ENST00000381337 FOXD4L4Q8WXT5 416 aaPredicted RBP14.26□□□□□ -0.13
THUMPD1-201ENST00000381337 TPM2P07951 284 aa14.26□□□□□ -0.13
THUMPD1-201ENST00000381337 SYNJ1O43426 1573 aa14.25□□□□□ -0.13
THUMPD1-201ENST00000381337 SAFB2Q14151 953 aaKnown RBP eCLIP14.25□□□□□ -0.13
THUMPD1-201ENST00000381337 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
THUMPD1-201ENST00000381337 CCDC144AA2RUR9 1427 aa14.25□□□□□ -0.13
THUMPD1-201ENST00000381337 PHF14O94880 888 aa14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 MAP7D2Q96T17 732 aa14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 HFM1A2PYH4 1435 aa14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 RRP9O43818 475 aaKnown RBP14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 NASPP49321 788 aaPredicted RBP14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 R3HCC1Q9Y3T6 440 aaKnown RBP14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
THUMPD1-201ENST00000381337 FGD1P98174 961 aa14.23□□□□□ -0.13
THUMPD1-201ENST00000381337 OS9Q13438 667 aaPredicted RBP14.23□□□□□ -0.13
THUMPD1-201ENST00000381337 AAMPQ13685 434 aa14.23□□□□□ -0.13
THUMPD1-201ENST00000381337 SKAP1Q86WV1 359 aa14.23□□□□□ -0.13
THUMPD1-201ENST00000381337 DZIP1LQ8IYY4 767 aaKnown RBP14.23□□□□□ -0.13
THUMPD1-201ENST00000381337 DDX19BQ9UMR2 479 aa14.22□□□□□ -0.13
THUMPD1-201ENST00000381337 ESPNB1AK53 854 aa14.22□□□□□ -0.13
THUMPD1-201ENST00000381337 MIA2Q96PC5 1412 aa14.22□□□□□ -0.13
THUMPD1-201ENST00000381337 NOL8Q76FK4 1167 aaKnown RBP14.22□□□□□ -0.13
THUMPD1-201ENST00000381337 CASKIN1Q8WXD9 1431 aa14.22□□□□□ -0.13
THUMPD1-201ENST00000381337 KANK1Q14678 1352 aa14.22□□□□□ -0.13
THUMPD1-201ENST00000381337 KIAA1211Q6ZU35 1233 aa14.22□□□□□ -0.13
THUMPD1-201ENST00000381337 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
THUMPD1-201ENST00000381337 MCM4P33991 863 aa14.21□□□□□ -0.13
THUMPD1-201ENST00000381337 NCOA2Q15596 1464 aa14.21□□□□□ -0.14
THUMPD1-201ENST00000381337 ISY1Q9ULR0 285 aaKnown RBP14.2□□□□□ -0.14
THUMPD1-201ENST00000381337 RSPH4AQ5TD94 716 aa14.2□□□□□ -0.14
THUMPD1-201ENST00000381337 PDE3AQ14432 1141 aa14.19□□□□□ -0.14
THUMPD1-201ENST00000381337 PDZRN3Q9UPQ7 1066 aa14.19□□□□□ -0.14
THUMPD1-201ENST00000381337 CUX1P39880 1505 aa14.19□□□□□ -0.14
THUMPD1-201ENST00000381337 NUCB2P80303 420 aa14.19□□□□□ -0.14
THUMPD1-201ENST00000381337 GRPEL1Q9HAV7 217 aa14.19□□□□□ -0.14
THUMPD1-201ENST00000381337 WASHC2CQ9Y4E1 1318 aa14.19□□□□□ -0.14
THUMPD1-201ENST00000381337 LNPKQ9C0E8 428 aa14.19□□□□□ -0.14
THUMPD1-201ENST00000381337 MTERF4Q7Z6M4 381 aaKnown RBP14.18□□□□□ -0.14
THUMPD1-201ENST00000381337 BCAR3O75815 825 aa14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 HMMRO75330 724 aa14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 FOXD4L6Q3SYB3 417 aaPredicted RBP14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 FOXD4L3Q6VB84 417 aaPredicted RBP14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 MCTP1Q6DN14 999 aa14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 RBM10P98175 930 aaKnown RBP14.17□□□□□ -0.14
THUMPD1-201ENST00000381337 TNNT3P45378 269 aaPredicted RBP14.16□□□□□ -0.14
THUMPD1-201ENST00000381337 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
THUMPD1-201ENST00000381337 CCDC173Q0VFZ6 552 aa14.15□□□□□ -0.14
THUMPD1-201ENST00000381337 NAP1L2Q9ULW6 460 aaPredicted RBP14.15□□□□□ -0.14
THUMPD1-201ENST00000381337 STK26Q9P289 416 aa14.15□□□□□ -0.14
THUMPD1-201ENST00000381337 NAIPQ13075 1403 aa14.15□□□□□ -0.14
THUMPD1-201ENST00000381337 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
THUMPD1-201ENST00000381337 PPP2R1AP30153 589 aa14.15□□□□□ -0.14
THUMPD1-201ENST00000381337 RUNDC1Q96C34 613 aa14.15□□□□□ -0.14
THUMPD1-201ENST00000381337 CARMIL2Q6F5E8 1435 aa14.14□□□□□ -0.15
THUMPD1-201ENST00000381337 FYCO1Q9BQS8 1478 aa14.14□□□□□ -0.15
THUMPD1-201ENST00000381337 C20orf194Q5TEA3 1177 aa14.13□□□□□ -0.15
THUMPD1-201ENST00000381337 CFTRP13569 1480 aa14.13□□□□□ -0.15
THUMPD1-201ENST00000381337 ZNF771Q7L3S4 317 aaPredicted RBP14.13□□□□□ -0.15
THUMPD1-201ENST00000381337 TRAK1Q9UPV9 953 aa14.12□□□□□ -0.15
THUMPD1-201ENST00000381337 REC8O95072 547 aa14.12□□□□□ -0.15
THUMPD1-201ENST00000381337 CAVIN1Q6NZI2 390 aaKnown RBP14.12□□□□□ -0.15
THUMPD1-201ENST00000381337 KIF16BQ96L93 1317 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms