RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 RAPGEF6Q8TEU7 1601 aa16.55■□□□□ 0.24
CDX2-201ENST00000381020 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
CDX2-201ENST00000381020 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
CDX2-201ENST00000381020 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
CDX2-201ENST00000381020 SAMD9Q5K651 1589 aa16.54■□□□□ 0.24
CDX2-201ENST00000381020 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
CDX2-201ENST00000381020 ANP32AP39687 249 aaKnown RBP16.51■□□□□ 0.23
CDX2-201ENST00000381020 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
CDX2-201ENST00000381020 MORC1Q86VD1 984 aa16.5■□□□□ 0.23
CDX2-201ENST00000381020 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
CDX2-201ENST00000381020 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
CDX2-201ENST00000381020 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
CDX2-201ENST00000381020 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
CDX2-201ENST00000381020 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.49■□□□□ 0.23
CDX2-201ENST00000381020 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
CDX2-201ENST00000381020 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
CDX2-201ENST00000381020 KIF14Q15058 1648 aa16.48■□□□□ 0.23
CDX2-201ENST00000381020 RPRD2Q5VT52 1461 aaKnown RBP16.47■□□□□ 0.23
CDX2-201ENST00000381020 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
CDX2-201ENST00000381020 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
CDX2-201ENST00000381020 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
CDX2-201ENST00000381020 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
CDX2-201ENST00000381020 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
CDX2-201ENST00000381020 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
CDX2-201ENST00000381020 NUP160Q12769 1436 aa16.46■□□□□ 0.23
CDX2-201ENST00000381020 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
CDX2-201ENST00000381020 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
CDX2-201ENST00000381020 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
CDX2-201ENST00000381020 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
CDX2-201ENST00000381020 RBM19Q9Y4C8 960 aaKnown RBP16.44■□□□□ 0.22
CDX2-201ENST00000381020 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
CDX2-201ENST00000381020 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
CDX2-201ENST00000381020 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
CDX2-201ENST00000381020 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
CDX2-201ENST00000381020 SOX12O15370 315 aa16.4■□□□□ 0.22
CDX2-201ENST00000381020 PLIN1O60240 522 aa16.37■□□□□ 0.21
CDX2-201ENST00000381020 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
CDX2-201ENST00000381020 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
CDX2-201ENST00000381020 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDX2-201ENST00000381020 C14orf37Q86TY3 774 aa16.37■□□□□ 0.21
CDX2-201ENST00000381020 VGFO15240 615 aaPredicted RBP16.36■□□□□ 0.21
CDX2-201ENST00000381020 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
CDX2-201ENST00000381020 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
CDX2-201ENST00000381020 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
CDX2-201ENST00000381020 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
CDX2-201ENST00000381020 RGS3P49796 1198 aa16.34■□□□□ 0.21
CDX2-201ENST00000381020 NBR1Q14596 966 aa16.34■□□□□ 0.21
CDX2-201ENST00000381020 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
CDX2-201ENST00000381020 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
CDX2-201ENST00000381020 SYCP2Q9BX26 1530 aa16.33■□□□□ 0.2
CDX2-201ENST00000381020 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
CDX2-201ENST00000381020 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
CDX2-201ENST00000381020 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
CDX2-201ENST00000381020 APAF1O14727 1248 aa16.31■□□□□ 0.2
CDX2-201ENST00000381020 KDM6BO15054 1643 aa16.31■□□□□ 0.2
CDX2-201ENST00000381020 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
CDX2-201ENST00000381020 PZPP20742 1482 aa16.31■□□□□ 0.2
CDX2-201ENST00000381020 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
CDX2-201ENST00000381020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
CDX2-201ENST00000381020 TRAPPC8Q9Y2L5 1435 aa16.3■□□□□ 0.2
CDX2-201ENST00000381020 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
CDX2-201ENST00000381020 EXOC6Q8TAG9 804 aa16.29■□□□□ 0.2
CDX2-201ENST00000381020 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
CDX2-201ENST00000381020 DNMT1P26358 1616 aaKnown RBP16.28■□□□□ 0.2
CDX2-201ENST00000381020 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
CDX2-201ENST00000381020 SLC12A5Q9H2X9 1139 aa16.28■□□□□ 0.2
CDX2-201ENST00000381020 PLCH2O75038 1416 aa16.28■□□□□ 0.2
CDX2-201ENST00000381020 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
CDX2-201ENST00000381020 CABP2Q9NPB3 220 aa16.28■□□□□ 0.2
CDX2-201ENST00000381020 FANCAO15360 1455 aa16.27■□□□□ 0.2
CDX2-201ENST00000381020 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.19
CDX2-201ENST00000381020 PDE3BQ13370 1112 aa16.27■□□□□ 0.19
CDX2-201ENST00000381020 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
CDX2-201ENST00000381020 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
CDX2-201ENST00000381020 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
CDX2-201ENST00000381020 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
CDX2-201ENST00000381020 EVC2Q86UK5 1308 aa16.25■□□□□ 0.19
CDX2-201ENST00000381020 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
CDX2-201ENST00000381020 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
CDX2-201ENST00000381020 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
CDX2-201ENST00000381020 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
CDX2-201ENST00000381020 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
CDX2-201ENST00000381020 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
CDX2-201ENST00000381020 BCL2L13Q9BXK5 485 aa16.22■□□□□ 0.19
CDX2-201ENST00000381020 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
CDX2-201ENST00000381020 ASXL2Q76L83 1435 aa16.21■□□□□ 0.19
CDX2-201ENST00000381020 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.19
CDX2-201ENST00000381020 CGNL1Q0VF96 1302 aa16.21■□□□□ 0.19
CDX2-201ENST00000381020 FAM135AQ9P2D6 1515 aa16.2■□□□□ 0.18
CDX2-201ENST00000381020 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
CDX2-201ENST00000381020 ANP32EQ9BTT0 268 aa16.19■□□□□ 0.18
CDX2-201ENST00000381020 CRBNQ96SW2 442 aa16.18■□□□□ 0.18
CDX2-201ENST00000381020 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
CDX2-201ENST00000381020 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
CDX2-201ENST00000381020 ABCC10Q5T3U5 1492 aa16.17■□□□□ 0.18
CDX2-201ENST00000381020 MTHFSP49914 203 aa16.17■□□□□ 0.18
CDX2-201ENST00000381020 FBXO31Q5XUX0 539 aaPredicted RBP16.17■□□□□ 0.18
CDX2-201ENST00000381020 DHX29Q7Z478 1369 aaKnown RBP16.17■□□□□ 0.18
CDX2-201ENST00000381020 ADGRL2O95490 1459 aa16.17■□□□□ 0.18
CDX2-201ENST00000381020 UPF2Q9HAU5 1272 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms