RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 KIF16BQ96L93 1317 aa21.23■□□□□ 0.99
SNAPC3-202ENST00000380821 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
SNAPC3-202ENST00000380821 STK26Q9P289 416 aa21.22■□□□□ 0.99
SNAPC3-202ENST00000380821 RRP1P56182 461 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-202ENST00000380821 KIF3AQ9Y496 699 aa21.21■□□□□ 0.99
SNAPC3-202ENST00000380821 TERF2IPQ9NYB0 399 aa21.21■□□□□ 0.99
SNAPC3-202ENST00000380821 DHX57Q6P158 1386 aaKnown RBP21.2■□□□□ 0.98
SNAPC3-202ENST00000380821 CLUAP1Q96AJ1 413 aa21.19■□□□□ 0.98
SNAPC3-202ENST00000380821 ISY1Q9ULR0 285 aaKnown RBP21.17■□□□□ 0.98
SNAPC3-202ENST00000380821 ATP6V1DQ9Y5K8 247 aa21.17■□□□□ 0.98
SNAPC3-202ENST00000380821 TPM3P06753 285 aa21.17■□□□□ 0.98
SNAPC3-202ENST00000380821 DDX49Q9Y6V7 483 aaKnown RBP21.17■□□□□ 0.98
SNAPC3-202ENST00000380821 NOL8Q76FK4 1167 aaKnown RBP21.16■□□□□ 0.98
SNAPC3-202ENST00000380821 E9PSI1 815 aa21.15■□□□□ 0.98
SNAPC3-202ENST00000380821 GORABQ5T7V8 394 aa21.15■□□□□ 0.98
SNAPC3-202ENST00000380821 CHMP4CQ96CF2 233 aa21.15■□□□□ 0.98
SNAPC3-202ENST00000380821 CCDC18Q5T9S5 1454 aa21.14■□□□□ 0.98
SNAPC3-202ENST00000380821 SETQ01105 290 aaPredicted RBP21.14■□□□□ 0.97
SNAPC3-202ENST00000380821 CGNL1Q0VF96 1302 aa21.13■□□□□ 0.97
SNAPC3-202ENST00000380821 EXOC6Q8TAG9 804 aa21.13■□□□□ 0.97
SNAPC3-202ENST00000380821 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
SNAPC3-202ENST00000380821 GGT6Q6P531 493 aa21.12■□□□□ 0.97
SNAPC3-202ENST00000380821 CRBNQ96SW2 442 aa21.11■□□□□ 0.97
SNAPC3-202ENST00000380821 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
SNAPC3-202ENST00000380821 SLC4A10Q6U841 1118 aa21.11■□□□□ 0.97
SNAPC3-202ENST00000380821 ZKSCAN2Q63HK3 967 aa21.1■□□□□ 0.97
SNAPC3-202ENST00000380821 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-202ENST00000380821 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
SNAPC3-202ENST00000380821 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
SNAPC3-202ENST00000380821 GOLGA6L19H0YKK7 550 aa21.09■□□□□ 0.97
SNAPC3-202ENST00000380821 SF3A1Q15459 793 aaKnown RBP21.09■□□□□ 0.97
SNAPC3-202ENST00000380821 SLC4A3P48751 1232 aa21.08■□□□□ 0.97
SNAPC3-202ENST00000380821 FOXD4L5Q5VV16 416 aaPredicted RBP21.08■□□□□ 0.97
SNAPC3-202ENST00000380821 FOXD4L4Q8WXT5 416 aaPredicted RBP21.08■□□□□ 0.97
SNAPC3-202ENST00000380821 RSPH4AQ5TD94 716 aa21.08■□□□□ 0.97
SNAPC3-202ENST00000380821 GPS2Q13227 327 aa21.08■□□□□ 0.96
SNAPC3-202ENST00000380821 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.96
SNAPC3-202ENST00000380821 H3BQV1 296 aa21.07■□□□□ 0.96
SNAPC3-202ENST00000380821 IFFO2Q5TF58 517 aa21.07■□□□□ 0.96
SNAPC3-202ENST00000380821 RASSF8Q8NHQ8 419 aa21.07■□□□□ 0.96
SNAPC3-202ENST00000380821 CHMP3Q9Y3E7 222 aa21.06■□□□□ 0.96
SNAPC3-202ENST00000380821 TAF7LQ5H9L4 462 aa21.06■□□□□ 0.96
SNAPC3-202ENST00000380821 PAK3O75914 559 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-202ENST00000380821 ANKRD45Q5TZF3 282 aa21.05■□□□□ 0.96
SNAPC3-202ENST00000380821 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-202ENST00000380821 CHMP5Q9NZZ3 219 aa21.05■□□□□ 0.96
SNAPC3-202ENST00000380821 PANK3Q9H999 370 aa21.05■□□□□ 0.96
SNAPC3-202ENST00000380821 UACAQ9BZF9 1416 aa21.04■□□□□ 0.96
SNAPC3-202ENST00000380821 CALRP27797 417 aaKnown RBP21.04■□□□□ 0.96
SNAPC3-202ENST00000380821 PLIN1O60240 522 aa21.03■□□□□ 0.96
SNAPC3-202ENST00000380821 MLECQ14165 292 aa21.03■□□□□ 0.96
SNAPC3-202ENST00000380821 NGEFQ8N5V2 710 aa21.03■□□□□ 0.96
SNAPC3-202ENST00000380821 CSB-PGBD3P0DP91 1061 aa21.02■□□□□ 0.96
SNAPC3-202ENST00000380821 FHOD3Q2V2M9 1422 aa21.02■□□□□ 0.96
SNAPC3-202ENST00000380821 BECN2A8MW95 431 aa21.02■□□□□ 0.96
SNAPC3-202ENST00000380821 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
SNAPC3-202ENST00000380821 ZNF771Q7L3S4 317 aaPredicted RBP21.02■□□□□ 0.95
SNAPC3-202ENST00000380821 FAM184AQ8NB25 1140 aa21.02■□□□□ 0.95
SNAPC3-202ENST00000380821 CREBRFQ8IUR6 639 aa21.01■□□□□ 0.95
SNAPC3-202ENST00000380821 REC8O95072 547 aa21■□□□□ 0.95
SNAPC3-202ENST00000380821 TSR1Q2NL82 804 aaKnown RBP21■□□□□ 0.95
SNAPC3-202ENST00000380821 CCDC70Q6NSX1 233 aa21■□□□□ 0.95
SNAPC3-202ENST00000380821 RILPL2Q969X0 211 aa21■□□□□ 0.95
SNAPC3-202ENST00000380821 TPM1P09493 284 aa21■□□□□ 0.95
SNAPC3-202ENST00000380821 DDX19BQ9UMR2 479 aa21■□□□□ 0.95
SNAPC3-202ENST00000380821 USP47Q96K76 1375 aa21■□□□□ 0.95
SNAPC3-202ENST00000380821 TPD52L1Q16890 204 aaPredicted RBP21■□□□□ 0.95
SNAPC3-202ENST00000380821 ST20-MTHFSA0A0A6YYL1 179 aa20.99■□□□□ 0.95
SNAPC3-202ENST00000380821 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
SNAPC3-202ENST00000380821 TPM2P07951 284 aa20.98■□□□□ 0.95
SNAPC3-202ENST00000380821 ZNF330Q9Y3S2 320 aaPredicted RBP20.98■□□□□ 0.95
SNAPC3-202ENST00000380821 APPP05067 770 aa20.97■□□□□ 0.95
SNAPC3-202ENST00000380821 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
SNAPC3-202ENST00000380821 TEX35Q5T0J7 233 aa20.97■□□□□ 0.95
SNAPC3-202ENST00000380821 CEP89Q96ST8 783 aa20.96■□□□□ 0.95
SNAPC3-202ENST00000380821 COG6Q9Y2V7 657 aa20.96■□□□□ 0.95
SNAPC3-202ENST00000380821 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.95
SNAPC3-202ENST00000380821 ROCK1Q13464 1354 aa20.95■□□□□ 0.94
SNAPC3-202ENST00000380821 AAMPQ13685 434 aa20.95■□□□□ 0.94
SNAPC3-202ENST00000380821 HNRNPMP52272 730 aaKnown RBP eCLIP20.95■□□□□ 0.94
SNAPC3-202ENST00000380821 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
SNAPC3-202ENST00000380821 KIF3BO15066 747 aa20.94■□□□□ 0.94
SNAPC3-202ENST00000380821 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
SNAPC3-202ENST00000380821 NUCB2P80303 420 aa20.93■□□□□ 0.94
SNAPC3-202ENST00000380821 AMPHP49418 695 aa20.93■□□□□ 0.94
SNAPC3-202ENST00000380821 CCAR2Q8N163 923 aaKnown RBP20.93■□□□□ 0.94
SNAPC3-202ENST00000380821 DIAPH3Q9NSV4 1193 aa20.93■□□□□ 0.94
SNAPC3-202ENST00000380821 ZNF592Q92610 1267 aa20.92■□□□□ 0.94
SNAPC3-202ENST00000380821 BCL2L13Q9BXK5 485 aa20.92■□□□□ 0.94
SNAPC3-202ENST00000380821 TOMM22Q9NS69 142 aa20.91■□□□□ 0.94
SNAPC3-202ENST00000380821 WIZO95785 1651 aa20.91■□□□□ 0.94
SNAPC3-202ENST00000380821 TMX4Q9H1E5 349 aaPredicted RBP20.91■□□□□ 0.94
SNAPC3-202ENST00000380821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNAPC3-202ENST00000380821 DZIP1LQ8IYY4 767 aaKnown RBP20.9■□□□□ 0.94
SNAPC3-202ENST00000380821 FAM13BQ9NYF5 915 aa20.9■□□□□ 0.94
SNAPC3-202ENST00000380821 LRRFIP1Q32MZ4 808 aaKnown RBP20.89■□□□□ 0.94
SNAPC3-202ENST00000380821 PES1O00541 588 aaKnown RBP20.89■□□□□ 0.94
SNAPC3-202ENST00000380821 ZKSCAN1P17029 563 aaPredicted RBP20.89■□□□□ 0.93
SNAPC3-202ENST00000380821 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
SNAPC3-202ENST00000380821 NCBP3Q53F19 620 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms