RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 EPAS1Q99814 870 aa10.64□□□□□ -0.71
SNAPC3-201ENST00000380799 RABGEF1Q9UJ41 708 aa10.59□□□□□ -0.71
SNAPC3-201ENST00000380799 PTPN5P54829 565 aa10.58□□□□□ -0.72
SNAPC3-201ENST00000380799 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
SNAPC3-201ENST00000380799 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
SNAPC3-201ENST00000380799 WNT2BQ93097 391 aa10.58□□□□□ -0.72
SNAPC3-201ENST00000380799 CFAP44Q96MT7 982 aa10.58□□□□□ -0.72
SNAPC3-201ENST00000380799 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
SNAPC3-201ENST00000380799 WDR70Q9NW82 654 aa10.57□□□□□ -0.72
SNAPC3-201ENST00000380799 C6orf132Q5T0Z8 1188 aa10.56□□□□□ -0.72
SNAPC3-201ENST00000380799 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
SNAPC3-201ENST00000380799 COL9A1P20849 921 aa10.55□□□□□ -0.72
SNAPC3-201ENST00000380799 PDIA6Q15084 440 aa10.55□□□□□ -0.72
SNAPC3-201ENST00000380799 E2F4Q16254 413 aa10.54□□□□□ -0.72
SNAPC3-201ENST00000380799 LAPTM4BQ86VI4 370 aa10.54□□□□□ -0.72
SNAPC3-201ENST00000380799 DDX12PQ92771 950 aa10.54□□□□□ -0.72
SNAPC3-201ENST00000380799 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
SNAPC3-201ENST00000380799 ANKK1Q8NFD2 765 aa10.53□□□□□ -0.72
SNAPC3-201ENST00000380799 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
SNAPC3-201ENST00000380799 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
SNAPC3-201ENST00000380799 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
SNAPC3-201ENST00000380799 NBR1Q14596 966 aa10.5□□□□□ -0.73
SNAPC3-201ENST00000380799 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
SNAPC3-201ENST00000380799 EN1Q05925 392 aaPredicted RBP10.49□□□□□ -0.73
SNAPC3-201ENST00000380799 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
SNAPC3-201ENST00000380799 MAP3K7O43318 606 aa10.48□□□□□ -0.73
SNAPC3-201ENST00000380799 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
SNAPC3-201ENST00000380799 NYAP1Q6ZVC0 841 aa10.45□□□□□ -0.74
SNAPC3-201ENST00000380799 ZFRQ96KR1 1074 aaKnown RBP10.45□□□□□ -0.74
SNAPC3-201ENST00000380799 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
SNAPC3-201ENST00000380799 PACS2Q86VP3 889 aa10.44□□□□□ -0.74
SNAPC3-201ENST00000380799 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
SNAPC3-201ENST00000380799 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
SNAPC3-201ENST00000380799 TSR1Q2NL82 804 aaKnown RBP10.41□□□□□ -0.74
SNAPC3-201ENST00000380799 SEPT9Q9UHD8 586 aaPredicted RBP10.41□□□□□ -0.74
SNAPC3-201ENST00000380799 GRXCR2A6NFK2 248 aa10.4□□□□□ -0.74
SNAPC3-201ENST00000380799 BCAMP50895 628 aa10.4□□□□□ -0.74
SNAPC3-201ENST00000380799 RGS20O76081 388 aa10.39□□□□□ -0.75
SNAPC3-201ENST00000380799 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
SNAPC3-201ENST00000380799 PRSS12P56730 875 aa10.37□□□□□ -0.75
SNAPC3-201ENST00000380799 CDCA7LQ96GN5 454 aa10.37□□□□□ -0.75
SNAPC3-201ENST00000380799 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.37□□□□□ -0.75
SNAPC3-201ENST00000380799 TSKSQ9UJT2 592 aa10.36□□□□□ -0.75
SNAPC3-201ENST00000380799 A0A0G2JS52 829 aa10.35□□□□□ -0.75
SNAPC3-201ENST00000380799 ITGBL1O95965 494 aaPredicted RBP10.35□□□□□ -0.75
SNAPC3-201ENST00000380799 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
SNAPC3-201ENST00000380799 WBP1LQ9NX94 342 aa10.34□□□□□ -0.75
SNAPC3-201ENST00000380799 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
SNAPC3-201ENST00000380799 OSBPP22059 807 aa10.33□□□□□ -0.76
SNAPC3-201ENST00000380799 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
SNAPC3-201ENST00000380799 HPS5Q9UPZ3 1129 aa10.32□□□□□ -0.76
SNAPC3-201ENST00000380799 ARHGEF1Q92888 912 aaKnown RBP10.31□□□□□ -0.76
SNAPC3-201ENST00000380799 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
SNAPC3-201ENST00000380799 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
SNAPC3-201ENST00000380799 KCNC4Q03721 635 aa10.29□□□□□ -0.76
SNAPC3-201ENST00000380799 TATDN2Q93075 761 aa10.29□□□□□ -0.76
SNAPC3-201ENST00000380799 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
SNAPC3-201ENST00000380799 PPP4CP60510 307 aa10.28□□□□□ -0.76
SNAPC3-201ENST00000380799 PNMA3Q9UL41 463 aa10.28□□□□□ -0.76
SNAPC3-201ENST00000380799 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
SNAPC3-201ENST00000380799 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
SNAPC3-201ENST00000380799 SMAPO00193 183 aa10.25□□□□□ -0.77
SNAPC3-201ENST00000380799 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
SNAPC3-201ENST00000380799 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
SNAPC3-201ENST00000380799 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
SNAPC3-201ENST00000380799 P3H3Q8IVL6 736 aa10.23□□□□□ -0.77
SNAPC3-201ENST00000380799 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
SNAPC3-201ENST00000380799 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
SNAPC3-201ENST00000380799 SLC4A3P48751 1232 aa10.2□□□□□ -0.78
SNAPC3-201ENST00000380799 NPDC1Q9NQX5 325 aaPredicted RBP10.2□□□□□ -0.78
SNAPC3-201ENST00000380799 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
SNAPC3-201ENST00000380799 PADI6Q6TGC4 694 aa10.19□□□□□ -0.78
SNAPC3-201ENST00000380799 IRX2Q9BZI1 471 aaPredicted RBP10.19□□□□□ -0.78
SNAPC3-201ENST00000380799 RNF40O75150 1001 aa10.17□□□□□ -0.78
SNAPC3-201ENST00000380799 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
SNAPC3-201ENST00000380799 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
SNAPC3-201ENST00000380799 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
SNAPC3-201ENST00000380799 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
SNAPC3-201ENST00000380799 PTGDRQ13258 359 aa10.12□□□□□ -0.79
SNAPC3-201ENST00000380799 SWT1Q5T5J6 900 aaKnown RBP10.12□□□□□ -0.79
SNAPC3-201ENST00000380799 MTRQ99707 1265 aa10.12□□□□□ -0.79
SNAPC3-201ENST00000380799 RBM46Q8TBY0 533 aaKnown RBP10.11□□□□□ -0.79
SNAPC3-201ENST00000380799 EYA1Q99502 592 aa10.11□□□□□ -0.79
SNAPC3-201ENST00000380799 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
SNAPC3-201ENST00000380799 NUTM2FA1L443 756 aa10.1□□□□□ -0.79
SNAPC3-201ENST00000380799 APLP1P51693 650 aa10.09□□□□□ -0.79
SNAPC3-201ENST00000380799 DNAJB2P25686 324 aa10.08□□□□□ -0.8
SNAPC3-201ENST00000380799 PLCB2Q00722 1185 aa10.08□□□□□ -0.8
SNAPC3-201ENST00000380799 FCHSD2O94868 740 aa10.07□□□□□ -0.8
SNAPC3-201ENST00000380799 SEMA3EO15041 775 aa10.05□□□□□ -0.8
SNAPC3-201ENST00000380799 SMYD5Q6GMV2 418 aa10.05□□□□□ -0.8
SNAPC3-201ENST00000380799 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
SNAPC3-201ENST00000380799 GGCXP38435 758 aa10.04□□□□□ -0.8
SNAPC3-201ENST00000380799 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
SNAPC3-201ENST00000380799 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
SNAPC3-201ENST00000380799 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
SNAPC3-201ENST00000380799 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
SNAPC3-201ENST00000380799 COPS2P61201 443 aa10.01□□□□□ -0.81
SNAPC3-201ENST00000380799 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.01□□□□□ -0.81
SNAPC3-201ENST00000380799 PCDHB3Q9Y5E6 796 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms