RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
HMGN1-202ENST00000380747 CNTLNQ9NXG0 1405 aa14.34□□□□□ -0.11
HMGN1-202ENST00000380747 CAMSAP2Q08AD1 1489 aa14.34□□□□□ -0.11
HMGN1-202ENST00000380747 ABCA6Q8N139 1617 aa14.33□□□□□ -0.11
HMGN1-202ENST00000380747 C3P01024 1663 aa14.33□□□□□ -0.11
HMGN1-202ENST00000380747 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
HMGN1-202ENST00000380747 SPATA31D1Q6ZQQ2 1576 aa14.32□□□□□ -0.12
HMGN1-202ENST00000380747 MBD5Q9P267 1494 aa14.31□□□□□ -0.12
HMGN1-202ENST00000380747 NPATQ14207 1427 aa14.31□□□□□ -0.12
HMGN1-202ENST00000380747 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
HMGN1-202ENST00000380747 PPARGC1BQ86YN6 1023 aaKnown RBP14.3□□□□□ -0.12
HMGN1-202ENST00000380747 ESF1Q9H501 851 aaKnown RBP14.3□□□□□ -0.12
HMGN1-202ENST00000380747 CCDC141Q6ZP82 1450 aa14.29□□□□□ -0.12
HMGN1-202ENST00000380747 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
HMGN1-202ENST00000380747 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
HMGN1-202ENST00000380747 KIDINS220Q9ULH0 1771 aa14.28□□□□□ -0.12
HMGN1-202ENST00000380747 TSPY4P0CV99 314 aa14.26□□□□□ -0.13
HMGN1-202ENST00000380747 TSPY10P0CW01 314 aa14.26□□□□□ -0.13
HMGN1-202ENST00000380747 MROH2AA6NES4 1674 aa14.26□□□□□ -0.13
HMGN1-202ENST00000380747 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-202ENST00000380747 FGD6Q6ZV73 1430 aa14.25□□□□□ -0.13
HMGN1-202ENST00000380747 ARHGEF5Q12774 1597 aa14.25□□□□□ -0.13
HMGN1-202ENST00000380747 PTPN23Q9H3S7 1636 aa14.24□□□□□ -0.13
HMGN1-202ENST00000380747 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
HMGN1-202ENST00000380747 CAMSAP1Q5T5Y3 1602 aa14.23□□□□□ -0.13
HMGN1-202ENST00000380747 A2MP01023 1474 aa14.23□□□□□ -0.13
HMGN1-202ENST00000380747 PLA2R1Q13018 1463 aa14.23□□□□□ -0.13
HMGN1-202ENST00000380747 ZMYM3Q14202 1370 aa14.22□□□□□ -0.13
HMGN1-202ENST00000380747 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
HMGN1-202ENST00000380747 TCOF1Q13428 1488 aaKnown RBP14.21□□□□□ -0.13
HMGN1-202ENST00000380747 PKD2Q13563 968 aa14.2□□□□□ -0.14
HMGN1-202ENST00000380747 PLXNC1O60486 1568 aa14.19□□□□□ -0.14
HMGN1-202ENST00000380747 ABCC5O15440 1437 aa14.19□□□□□ -0.14
HMGN1-202ENST00000380747 ZNF142P52746 1687 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-202ENST00000380747 DAPK1P53355 1430 aa14.18□□□□□ -0.14
HMGN1-202ENST00000380747 ADGBQ8N7X0 1667 aa14.18□□□□□ -0.14
HMGN1-202ENST00000380747 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
HMGN1-202ENST00000380747 PTPRKQ15262 1439 aa14.17□□□□□ -0.14
HMGN1-202ENST00000380747 MAST1Q9Y2H9 1570 aa14.17□□□□□ -0.14
HMGN1-202ENST00000380747 ZNF335Q9H4Z2 1342 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-202ENST00000380747 UBAP1LF5GYI3 381 aa14.16□□□□□ -0.14
HMGN1-202ENST00000380747 GGT6Q6P531 493 aa14.16□□□□□ -0.14
HMGN1-202ENST00000380747 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
HMGN1-202ENST00000380747 CEP170BQ9Y4F5 1589 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-202ENST00000380747 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
HMGN1-202ENST00000380747 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
HMGN1-202ENST00000380747 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
HMGN1-202ENST00000380747 KIF3BO15066 747 aa14.15□□□□□ -0.14
HMGN1-202ENST00000380747 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
HMGN1-202ENST00000380747 SHANK2Q9UPX8 1470 aa14.14□□□□□ -0.15
HMGN1-202ENST00000380747 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
HMGN1-202ENST00000380747 CROCC2H7BZ55 1655 aa14.13□□□□□ -0.15
HMGN1-202ENST00000380747 KIF15Q9NS87 1388 aa14.11□□□□□ -0.15
HMGN1-202ENST00000380747 CLTCQ00610 1675 aaKnown RBP14.11□□□□□ -0.15
HMGN1-202ENST00000380747 ITGAEP38570 1179 aa14.11□□□□□ -0.15
HMGN1-202ENST00000380747 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
HMGN1-202ENST00000380747 ANKRD30AQ9BXX3 1397 aa14.1□□□□□ -0.15
HMGN1-202ENST00000380747 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-202ENST00000380747 DUOX2Q9NRD8 1548 aa14.1□□□□□ -0.15
HMGN1-202ENST00000380747 CPS1P31327 1500 aa14.07□□□□□ -0.16
HMGN1-202ENST00000380747 FAM135AQ9P2D6 1515 aa14.07□□□□□ -0.16
HMGN1-202ENST00000380747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.06□□□□□ -0.16
HMGN1-202ENST00000380747 WASHC2CQ9Y4E1 1318 aa14.05□□□□□ -0.16
HMGN1-202ENST00000380747 ERBINQ96RT1 1412 aa14.05□□□□□ -0.16
HMGN1-202ENST00000380747 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
HMGN1-202ENST00000380747 ADGRL2O95490 1459 aa14.05□□□□□ -0.16
HMGN1-202ENST00000380747 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
HMGN1-202ENST00000380747 TOM1O60784 492 aa14.04□□□□□ -0.16
HMGN1-202ENST00000380747 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-202ENST00000380747 FKBP8Q14318 412 aa14.03□□□□□ -0.16
HMGN1-202ENST00000380747 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
HMGN1-202ENST00000380747 MED1Q15648 1581 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-202ENST00000380747 NEURL4Q96JN8 1562 aa14.03□□□□□ -0.16
HMGN1-202ENST00000380747 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
HMGN1-202ENST00000380747 PZPP20742 1482 aa14.02□□□□□ -0.16
HMGN1-202ENST00000380747 TNRQ92752 1358 aa14.02□□□□□ -0.17
HMGN1-202ENST00000380747 HSPA1LP34931 641 aa14.02□□□□□ -0.17
HMGN1-202ENST00000380747 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-202ENST00000380747 ROCK1Q13464 1354 aa14□□□□□ -0.17
HMGN1-202ENST00000380747 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
HMGN1-202ENST00000380747 MED14O60244 1454 aa13.99□□□□□ -0.17
HMGN1-202ENST00000380747 NLRP1Q9C000 1473 aa13.99□□□□□ -0.17
HMGN1-202ENST00000380747 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
HMGN1-202ENST00000380747 MROH1Q8NDA8 1641 aa13.99□□□□□ -0.17
HMGN1-202ENST00000380747 KANK1Q14678 1352 aa13.98□□□□□ -0.17
HMGN1-202ENST00000380747 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
HMGN1-202ENST00000380747 ANKLE2Q86XL3 938 aa13.98□□□□□ -0.17
HMGN1-202ENST00000380747 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-202ENST00000380747 ABCC3O15438 1527 aa13.98□□□□□ -0.17
HMGN1-202ENST00000380747 DEPDC5O75140 1603 aa13.97□□□□□ -0.17
HMGN1-202ENST00000380747 PIP4K2BP78356 416 aa13.97□□□□□ -0.17
HMGN1-202ENST00000380747 FBXO31Q5XUX0 539 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-202ENST00000380747 PRDM15P57071 1507 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-202ENST00000380747 CAPN15O75808 1086 aa13.96□□□□□ -0.17
HMGN1-202ENST00000380747 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
HMGN1-202ENST00000380747 ALKQ9UM73 1620 aa13.95□□□□□ -0.18
HMGN1-202ENST00000380747 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-202ENST00000380747 CEP152O94986 1710 aa13.94□□□□□ -0.18
HMGN1-202ENST00000380747 UGGT1Q9NYU2 1555 aa13.94□□□□□ -0.18
HMGN1-202ENST00000380747 LRRC7Q96NW7 1537 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms