RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 RAB3GAP2Q9H2M9 1393 aa8.97□□□□□ -0.97
CCDC171-201ENST00000380701 RGS3P49796 1198 aa8.97□□□□□ -0.97
CCDC171-201ENST00000380701 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.97
CCDC171-201ENST00000380701 NOL10Q9BSC4 688 aaKnown RBP8.96□□□□□ -0.97
CCDC171-201ENST00000380701 NEXNQ0ZGT2 675 aa8.96□□□□□ -0.97
CCDC171-201ENST00000380701 KIF15Q9NS87 1388 aa8.96□□□□□ -0.98
CCDC171-201ENST00000380701 USP35Q9P2H5 1018 aa8.96□□□□□ -0.98
CCDC171-201ENST00000380701 ZNF330Q9Y3S2 320 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-201ENST00000380701 MIA2Q96PC5 1412 aa8.96□□□□□ -0.98
CCDC171-201ENST00000380701 TTC5Q8N0Z6 440 aa8.96□□□□□ -0.98
CCDC171-201ENST00000380701 DNTTIP2Q5QJE6 756 aaKnown RBP8.95□□□□□ -0.98
CCDC171-201ENST00000380701 GBP4Q96PP9 640 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
CCDC171-201ENST00000380701 CUX1P39880 1505 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 POGZQ7Z3K3 1410 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 ATF3P18847 181 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 FAM69CQ0P6D2 419 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 TEFQ10587 303 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 CLSTN1O94985 981 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 MEX3CQ5U5Q3 659 aaKnown RBP8.95□□□□□ -0.98
CCDC171-201ENST00000380701 DHX57Q6P158 1386 aaKnown RBP8.95□□□□□ -0.98
CCDC171-201ENST00000380701 GRIN2BQ13224 1484 aa8.95□□□□□ -0.98
CCDC171-201ENST00000380701 DDX58O95786 925 aaKnown RBP8.94□□□□□ -0.98
CCDC171-201ENST00000380701 FRAT2O75474 233 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-201ENST00000380701 ITPRIPQ8IWB1 547 aa8.94□□□□□ -0.98
CCDC171-201ENST00000380701 ROCK1Q13464 1354 aa8.93□□□□□ -0.98
CCDC171-201ENST00000380701 TCERG1O14776 1098 aaKnown RBP8.93□□□□□ -0.98
CCDC171-201ENST00000380701 TULP1O00294 542 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-201ENST00000380701 IRX6P78412 446 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-201ENST00000380701 CHMP3Q9Y3E7 222 aa8.93□□□□□ -0.98
CCDC171-201ENST00000380701 RCAN3Q9UKA8 241 aa8.92□□□□□ -0.98
CCDC171-201ENST00000380701 PSME1Q06323 249 aa8.92□□□□□ -0.98
CCDC171-201ENST00000380701 CENPJQ9HC77 1338 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-201ENST00000380701 IFT140Q96RY7 1462 aa8.92□□□□□ -0.98
CCDC171-201ENST00000380701 AAMPQ13685 434 aa8.92□□□□□ -0.98
CCDC171-201ENST00000380701 CPLX2Q6PUV4 134 aaKnown RBP8.92□□□□□ -0.98
CCDC171-201ENST00000380701 NBR1Q14596 966 aa8.91□□□□□ -0.98
CCDC171-201ENST00000380701 SCAPERQ9BY12 1400 aa8.91□□□□□ -0.98
CCDC171-201ENST00000380701 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-201ENST00000380701 SYNJ2O15056 1496 aa8.91□□□□□ -0.98
CCDC171-201ENST00000380701 MYBBP1AQ9BQG0 1328 aaKnown RBP8.91□□□□□ -0.98
CCDC171-201ENST00000380701 HSP90AB4PQ58FF6 505 aa8.9□□□□□ -0.98
CCDC171-201ENST00000380701 L3MBTL2Q969R5 705 aa8.9□□□□□ -0.98
CCDC171-201ENST00000380701 GPRASP1Q5JY77 1395 aa8.9□□□□□ -0.98
CCDC171-201ENST00000380701 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
CCDC171-201ENST00000380701 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
CCDC171-201ENST00000380701 RUFY2Q8WXA3 655 aa8.89□□□□□ -0.99
CCDC171-201ENST00000380701 TRAK1Q9UPV9 953 aa8.89□□□□□ -0.99
CCDC171-201ENST00000380701 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
CCDC171-201ENST00000380701 API5Q9BZZ5 524 aaKnown RBP8.89□□□□□ -0.99
CCDC171-201ENST00000380701 THEMISQ8N1K5 641 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-201ENST00000380701 RAPGEF4Q8WZA2 1011 aa8.89□□□□□ -0.99
CCDC171-201ENST00000380701 SYNE3Q6ZMZ3 975 aa8.89□□□□□ -0.99
CCDC171-201ENST00000380701 CTDP1Q9Y5B0 961 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-201ENST00000380701 E9PSI1 815 aa8.88□□□□□ -0.99
CCDC171-201ENST00000380701 ATP6V1DQ9Y5K8 247 aa8.88□□□□□ -0.99
CCDC171-201ENST00000380701 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
CCDC171-201ENST00000380701 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
CCDC171-201ENST00000380701 FYCO1Q9BQS8 1478 aa8.88□□□□□ -0.99
CCDC171-201ENST00000380701 MARCH6O60337 910 aa8.88□□□□□ -0.99
CCDC171-201ENST00000380701 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
CCDC171-201ENST00000380701 ST18O60284 1047 aa8.87□□□□□ -0.99
CCDC171-201ENST00000380701 CEP89Q96ST8 783 aa8.87□□□□□ -0.99
CCDC171-201ENST00000380701 RASSF8Q8NHQ8 419 aa8.87□□□□□ -0.99
CCDC171-201ENST00000380701 KIF16BQ96L93 1317 aa8.87□□□□□ -0.99
CCDC171-201ENST00000380701 PHF14O94880 888 aa8.87□□□□□ -0.99
CCDC171-201ENST00000380701 IGF1RP08069 1367 aa8.86□□□□□ -0.99
CCDC171-201ENST00000380701 DIAPH1O60610 1272 aaKnown RBP8.86□□□□□ -0.99
CCDC171-201ENST00000380701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC171-201ENST00000380701 WIZO95785 1651 aa8.86□□□□□ -0.99
CCDC171-201ENST00000380701 CCDC47Q96A33 483 aaKnown RBP8.86□□□□□ -0.99
CCDC171-201ENST00000380701 DRC7Q8IY82 874 aa8.86□□□□□ -0.99
CCDC171-201ENST00000380701 LTV1Q96GA3 475 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-201ENST00000380701 NOP58Q9Y2X3 529 aaKnown RBP8.86□□□□□ -0.99
CCDC171-201ENST00000380701 HFM1A2PYH4 1435 aa8.86□□□□□ -0.99
CCDC171-201ENST00000380701 SLC52A1Q9NWF4 448 aa8.85□□□□□ -0.99
CCDC171-201ENST00000380701 TRIM6-TRIM34B2RNG4 842 aa8.85□□□□□ -0.99
CCDC171-201ENST00000380701 SLC4A10Q6U841 1118 aa8.85□□□□□ -0.99
CCDC171-201ENST00000380701 MSH5O43196 834 aa8.85□□□□□ -0.99
CCDC171-201ENST00000380701 ZKSCAN2Q63HK3 967 aa8.85□□□□□ -0.99
CCDC171-201ENST00000380701 TPM2P07951 284 aa8.84□□□□□ -0.99
CCDC171-201ENST00000380701 GNAI1P63096 354 aa8.84□□□□□ -0.99
CCDC171-201ENST00000380701 SF3B2Q13435 895 aaKnown RBP8.84□□□□□ -0.99
CCDC171-201ENST00000380701 MSNP26038 577 aaKnown RBP8.84□□□□□ -0.99
CCDC171-201ENST00000380701 TCEAL9Q9UHQ7 104 aa8.84□□□□□ -0.99
CCDC171-201ENST00000380701 RPGRIP1LQ68CZ1 1315 aa8.84□□□□□ -0.99
CCDC171-201ENST00000380701 TOMM22Q9NS69 142 aa8.84□□□□□ -0.99
CCDC171-201ENST00000380701 SMG6Q86US8 1419 aaKnown RBP8.83□□□□□ -1
CCDC171-201ENST00000380701 CASKIN1Q8WXD9 1431 aa8.83□□□□□ -1
CCDC171-201ENST00000380701 RNF20Q5VTR2 975 aa8.83□□□□□ -1
CCDC171-201ENST00000380701 C9orf78Q9NZ63 289 aaPredicted RBP8.83□□□□□ -1
CCDC171-201ENST00000380701 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
CCDC171-201ENST00000380701 EFCAB5A4FU69 1503 aa8.82□□□□□ -1
CCDC171-201ENST00000380701 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
CCDC171-201ENST00000380701 MINK1Q8N4C8 1332 aaPredicted RBP8.82□□□□□ -1
CCDC171-201ENST00000380701 ZKSCAN1P17029 563 aaPredicted RBP8.82□□□□□ -1
CCDC171-201ENST00000380701 DDX19BQ9UMR2 479 aa8.82□□□□□ -1
CCDC171-201ENST00000380701 ANKRD50Q9ULJ7 1429 aa8.82□□□□□ -1
CCDC171-201ENST00000380701 APBB1O00213 710 aa8.82□□□□□ -1
CCDC171-201ENST00000380701 MFAP1P55081 439 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms