RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 ADAMTS8Q9UP79 889 aa15.72■□□□□ 0.11
HERC6-203ENST00000380265 L1TD1Q5T7N2 865 aaKnown RBP15.71■□□□□ 0.11
HERC6-203ENST00000380265 CUL7Q14999 1698 aa15.71■□□□□ 0.11
HERC6-203ENST00000380265 VSIG10Q8N0Z9 540 aa15.71■□□□□ 0.1
HERC6-203ENST00000380265 LRRIQ1Q96JM4 1722 aa15.7■□□□□ 0.1
HERC6-203ENST00000380265 PKNOX2Q96KN3 472 aa15.7■□□□□ 0.1
HERC6-203ENST00000380265 KDM2BQ8NHM5 1336 aa15.7■□□□□ 0.1
HERC6-203ENST00000380265 RRAGDQ9NQL2 400 aaPredicted RBP15.7■□□□□ 0.1
HERC6-203ENST00000380265 CC2D2AQ9P2K1 1620 aa15.69■□□□□ 0.1
HERC6-203ENST00000380265 PNNQ9H307 717 aaKnown RBP15.69■□□□□ 0.1
HERC6-203ENST00000380265 GOLGA2Q08379 1002 aa15.69■□□□□ 0.1
HERC6-203ENST00000380265 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
HERC6-203ENST00000380265 GAPVD1Q14C86 1478 aa15.68■□□□□ 0.1
HERC6-203ENST00000380265 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
HERC6-203ENST00000380265 ARHGEF11O15085 1522 aa15.68■□□□□ 0.1
HERC6-203ENST00000380265 THOC2Q8NI27 1593 aaKnown RBP15.67■□□□□ 0.1
HERC6-203ENST00000380265 NBPF1Q3BBV0 1214 aa15.67■□□□□ 0.1
HERC6-203ENST00000380265 PZPP20742 1482 aa15.67■□□□□ 0.1
HERC6-203ENST00000380265 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
HERC6-203ENST00000380265 PARD3Q8TEW0 1356 aa15.65■□□□□ 0.1
HERC6-203ENST00000380265 SAMD9Q5K651 1589 aa15.65■□□□□ 0.1
HERC6-203ENST00000380265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.1
HERC6-203ENST00000380265 GOLGA6L3A6NEY3 463 aa15.64■□□□□ 0.09
HERC6-203ENST00000380265 KNSTRNQ9Y448 316 aa15.64■□□□□ 0.09
HERC6-203ENST00000380265 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
HERC6-203ENST00000380265 POLR1AO95602 1720 aaPredicted RBP15.64■□□□□ 0.09
HERC6-203ENST00000380265 TSPY4P0CV99 314 aa15.64■□□□□ 0.09
HERC6-203ENST00000380265 TSPY10P0CW01 314 aa15.64■□□□□ 0.09
HERC6-203ENST00000380265 KDM5CP41229 1560 aa15.64■□□□□ 0.09
HERC6-203ENST00000380265 NESP48681 1621 aa15.64■□□□□ 0.09
HERC6-203ENST00000380265 DUSP27Q5VZP5 1158 aa15.63■□□□□ 0.09
HERC6-203ENST00000380265 BCAR3O75815 825 aa15.63■□□□□ 0.09
HERC6-203ENST00000380265 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
HERC6-203ENST00000380265 HSP90AA2PQ14568 343 aaPredicted RBP15.62■□□□□ 0.09
HERC6-203ENST00000380265 RALGAPBQ86X10 1494 aa15.62■□□□□ 0.09
HERC6-203ENST00000380265 PER1O15534 1290 aaPredicted RBP15.62■□□□□ 0.09
HERC6-203ENST00000380265 SEC24BO95487 1268 aa15.62■□□□□ 0.09
HERC6-203ENST00000380265 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
HERC6-203ENST00000380265 TMF1P82094 1093 aa15.61■□□□□ 0.09
HERC6-203ENST00000380265 ANKRD50Q9ULJ7 1429 aa15.61■□□□□ 0.09
HERC6-203ENST00000380265 MBD5Q9P267 1494 aa15.61■□□□□ 0.09
HERC6-203ENST00000380265 COG6Q9Y2V7 657 aa15.6■□□□□ 0.09
HERC6-203ENST00000380265 KIF14Q15058 1648 aa15.6■□□□□ 0.09
HERC6-203ENST00000380265 IGHDP01880 384 aa15.59■□□□□ 0.09
HERC6-203ENST00000380265 PANK2Q9BZ23 570 aa15.58■□□□□ 0.09
HERC6-203ENST00000380265 APAF1O14727 1248 aa15.58■□□□□ 0.08
HERC6-203ENST00000380265 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.08
HERC6-203ENST00000380265 NEUROD2Q15784 382 aa15.57■□□□□ 0.08
HERC6-203ENST00000380265 PANK1Q8TE04 598 aa15.57■□□□□ 0.08
HERC6-203ENST00000380265 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
HERC6-203ENST00000380265 PRG4Q92954 1404 aaPredicted RBP15.55■□□□□ 0.08
HERC6-203ENST00000380265 PPP2R1AP30153 589 aa15.55■□□□□ 0.08
HERC6-203ENST00000380265 ZMYND15Q9H091 742 aa15.55■□□□□ 0.08
HERC6-203ENST00000380265 DNMT1P26358 1616 aaKnown RBP15.55■□□□□ 0.08
HERC6-203ENST00000380265 UHRF1BP1Q6BDS2 1440 aa15.55■□□□□ 0.08
HERC6-203ENST00000380265 DISP3Q9P2K9 1392 aa15.54■□□□□ 0.08
HERC6-203ENST00000380265 MAPK8IP3Q9UPT6 1336 aa15.54■□□□□ 0.08
HERC6-203ENST00000380265 TRIM44Q96DX7 344 aaPredicted RBP15.54■□□□□ 0.08
HERC6-203ENST00000380265 SLFN5Q08AF3 891 aa15.54■□□□□ 0.08
HERC6-203ENST00000380265 BLMP54132 1417 aaPredicted RBP15.53■□□□□ 0.08
HERC6-203ENST00000380265 CAMSAP2Q08AD1 1489 aa15.53■□□□□ 0.08
HERC6-203ENST00000380265 CLUAP1Q96AJ1 413 aa15.52■□□□□ 0.08
HERC6-203ENST00000380265 HNRNPMP52272 730 aaKnown RBP eCLIP15.52■□□□□ 0.07
HERC6-203ENST00000380265 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.07
HERC6-203ENST00000380265 TBC1D2Q9BYX2 928 aa15.52■□□□□ 0.07
HERC6-203ENST00000380265 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.07
HERC6-203ENST00000380265 USP19O94966 1318 aa15.52■□□□□ 0.07
HERC6-203ENST00000380265 PLEKHH2Q8IVE3 1493 aa15.51■□□□□ 0.07
HERC6-203ENST00000380265 KIAA0586Q9BVV6 1533 aa15.51■□□□□ 0.07
HERC6-203ENST00000380265 CGNL1Q0VF96 1302 aa15.5■□□□□ 0.07
HERC6-203ENST00000380265 BCL2L13Q9BXK5 485 aa15.5■□□□□ 0.07
HERC6-203ENST00000380265 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
HERC6-203ENST00000380265 CENPJQ9HC77 1338 aaPredicted RBP15.5■□□□□ 0.07
HERC6-203ENST00000380265 MCM4P33991 863 aa15.5■□□□□ 0.07
HERC6-203ENST00000380265 MFAP1P55081 439 aaKnown RBP15.5■□□□□ 0.07
HERC6-203ENST00000380265 ZMYM4Q5VZL5 1548 aa15.5■□□□□ 0.07
HERC6-203ENST00000380265 CCDC144AA2RUR9 1427 aa15.5■□□□□ 0.07
HERC6-203ENST00000380265 TRAK2O60296 914 aa15.49■□□□□ 0.07
HERC6-203ENST00000380265 URB2Q14146 1524 aaKnown RBP15.49■□□□□ 0.07
HERC6-203ENST00000380265 PLEKHD1A6NEE1 506 aa15.48■□□□□ 0.07
HERC6-203ENST00000380265 PLEKHG5O94827 1062 aa15.48■□□□□ 0.07
HERC6-203ENST00000380265 TESK2Q96S53 571 aa15.48■□□□□ 0.07
HERC6-203ENST00000380265 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
HERC6-203ENST00000380265 WDR62O43379 1518 aa15.47■□□□□ 0.07
HERC6-203ENST00000380265 E9PSI1 815 aa15.47■□□□□ 0.07
HERC6-203ENST00000380265 CLCN1P35523 988 aa15.47■□□□□ 0.07
HERC6-203ENST00000380265 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
HERC6-203ENST00000380265 ERBINQ96RT1 1412 aa15.47■□□□□ 0.07
HERC6-203ENST00000380265 RRP7AQ9Y3A4 280 aaKnown RBP15.46■□□□□ 0.06
HERC6-203ENST00000380265 EIF3AQ14152 1382 aaKnown RBP15.45■□□□□ 0.06
HERC6-203ENST00000380265 RRP9O43818 475 aaKnown RBP15.45■□□□□ 0.06
HERC6-203ENST00000380265 MRE11P49959 708 aa15.45■□□□□ 0.06
HERC6-203ENST00000380265 PDZRN3Q9UPQ7 1066 aa15.45■□□□□ 0.06
HERC6-203ENST00000380265 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
HERC6-203ENST00000380265 PMFBP1Q8TBY8 1022 aa15.44■□□□□ 0.06
HERC6-203ENST00000380265 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
HERC6-203ENST00000380265 ANTXR1Q9H6X2 564 aa15.44■□□□□ 0.06
HERC6-203ENST00000380265 TROQ12816 1431 aaPredicted RBP15.44■□□□□ 0.06
HERC6-203ENST00000380265 HSCBQ8IWL3 235 aa15.44■□□□□ 0.06
HERC6-203ENST00000380265 ARHGEF12Q9NZN5 1544 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms