RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
EXOSC9-202ENST00000379663 MAGI2Q86UL8 1455 aa17.78■□□□□ 0.44
EXOSC9-202ENST00000379663 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
EXOSC9-202ENST00000379663 DIP2CQ9Y2E4 1556 aa17.76■□□□□ 0.43
EXOSC9-202ENST00000379663 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
EXOSC9-202ENST00000379663 IQGAP3Q86VI3 1631 aa17.75■□□□□ 0.43
EXOSC9-202ENST00000379663 PZPP20742 1482 aa17.74■□□□□ 0.43
EXOSC9-202ENST00000379663 RNF17Q9BXT8 1623 aaKnown RBP17.72■□□□□ 0.43
EXOSC9-202ENST00000379663 MROH1Q8NDA8 1641 aa17.71■□□□□ 0.43
EXOSC9-202ENST00000379663 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
EXOSC9-202ENST00000379663 PRDM15P57071 1507 aaPredicted RBP17.7■□□□□ 0.42
EXOSC9-202ENST00000379663 REREQ9P2R6 1566 aa17.69■□□□□ 0.42
EXOSC9-202ENST00000379663 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
EXOSC9-202ENST00000379663 VWDEQ8N2E2 1590 aa17.68■□□□□ 0.42
EXOSC9-202ENST00000379663 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
EXOSC9-202ENST00000379663 A2MP01023 1474 aa17.68■□□□□ 0.42
EXOSC9-202ENST00000379663 RAPGEF3O95398 923 aa17.67■□□□□ 0.42
EXOSC9-202ENST00000379663 DHX29Q7Z478 1369 aaKnown RBP17.67■□□□□ 0.42
EXOSC9-202ENST00000379663 ARHGEF40Q8TER5 1519 aa17.66■□□□□ 0.42
EXOSC9-202ENST00000379663 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
EXOSC9-202ENST00000379663 TET3O43151 1660 aa17.63■□□□□ 0.41
EXOSC9-202ENST00000379663 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
EXOSC9-202ENST00000379663 MPHOSPH9Q99550 1183 aa17.63■□□□□ 0.41
EXOSC9-202ENST00000379663 SIGLEC1Q9BZZ2 1709 aa17.63■□□□□ 0.41
EXOSC9-202ENST00000379663 CEP152O94986 1710 aa17.62■□□□□ 0.41
EXOSC9-202ENST00000379663 NUP155O75694 1391 aa17.61■□□□□ 0.41
EXOSC9-202ENST00000379663 E9PCH4 1651 aa17.61■□□□□ 0.41
EXOSC9-202ENST00000379663 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
EXOSC9-202ENST00000379663 AGLP35573 1532 aa17.58■□□□□ 0.4
EXOSC9-202ENST00000379663 ATP10AO60312 1499 aa17.58■□□□□ 0.4
EXOSC9-202ENST00000379663 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
EXOSC9-202ENST00000379663 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
EXOSC9-202ENST00000379663 LMTK2Q8IWU2 1503 aa17.57■□□□□ 0.4
EXOSC9-202ENST00000379663 SPHKAPQ2M3C7 1700 aa17.56■□□□□ 0.4
EXOSC9-202ENST00000379663 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
EXOSC9-202ENST00000379663 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
EXOSC9-202ENST00000379663 EFCAB6Q5THR3 1501 aa17.55■□□□□ 0.4
EXOSC9-202ENST00000379663 CAMSAP1Q5T5Y3 1602 aa17.53■□□□□ 0.4
EXOSC9-202ENST00000379663 RPRD2Q5VT52 1461 aaKnown RBP17.52■□□□□ 0.39
EXOSC9-202ENST00000379663 KIF3BO15066 747 aa17.52■□□□□ 0.39
EXOSC9-202ENST00000379663 ABCC3O15438 1527 aa17.51■□□□□ 0.39
EXOSC9-202ENST00000379663 PKD2Q13563 968 aa17.5■□□□□ 0.39
EXOSC9-202ENST00000379663 KANK1Q14678 1352 aa17.5■□□□□ 0.39
EXOSC9-202ENST00000379663 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
EXOSC9-202ENST00000379663 TRPM2O94759 1503 aa17.48■□□□□ 0.39
EXOSC9-202ENST00000379663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.395e-7■■■□□ 14.7
EXOSC9-202ENST00000379663 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
EXOSC9-202ENST00000379663 TIMELESSQ9UNS1 1208 aa17.47■□□□□ 0.39
EXOSC9-202ENST00000379663 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
EXOSC9-202ENST00000379663 CLTCQ00610 1675 aaKnown RBP17.44■□□□□ 0.38
EXOSC9-202ENST00000379663 PTPRTO14522 1441 aa17.44■□□□□ 0.38
EXOSC9-202ENST00000379663 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
EXOSC9-202ENST00000379663 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
EXOSC9-202ENST00000379663 PREX1Q8TCU6 1659 aa17.41■□□□□ 0.38
EXOSC9-202ENST00000379663 KIF1BO60333 1816 aa17.41■□□□□ 0.38
EXOSC9-202ENST00000379663 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
EXOSC9-202ENST00000379663 NEURL4Q96JN8 1562 aa17.4■□□□□ 0.38
EXOSC9-202ENST00000379663 NPATQ14207 1427 aa17.4■□□□□ 0.38
EXOSC9-202ENST00000379663 ARHGAP31Q2M1Z3 1444 aa17.4■□□□□ 0.38
EXOSC9-202ENST00000379663 MROH2AA6NES4 1674 aa17.4■□□□□ 0.38
EXOSC9-202ENST00000379663 TONSLQ96HA7 1378 aa17.4■□□□□ 0.38
EXOSC9-202ENST00000379663 PIK3C2BO00750 1634 aa17.39■□□□□ 0.37
EXOSC9-202ENST00000379663 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
EXOSC9-202ENST00000379663 GGT6Q6P531 493 aa17.38■□□□□ 0.37
EXOSC9-202ENST00000379663 SYNMO15061 1565 aa17.36■□□□□ 0.37
EXOSC9-202ENST00000379663 FER1L4A9Z1Z3 1794 aa17.36■□□□□ 0.37
EXOSC9-202ENST00000379663 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
EXOSC9-202ENST00000379663 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
EXOSC9-202ENST00000379663 NOS1P29475 1434 aa17.34■□□□□ 0.37
EXOSC9-202ENST00000379663 CNTLNQ9NXG0 1405 aa17.33■□□□□ 0.37
EXOSC9-202ENST00000379663 UGGT1Q9NYU2 1555 aa17.33■□□□□ 0.36
EXOSC9-202ENST00000379663 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
EXOSC9-202ENST00000379663 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
EXOSC9-202ENST00000379663 SPATA31D1Q6ZQQ2 1576 aa17.31■□□□□ 0.36
EXOSC9-202ENST00000379663 MYO5BQ9ULV0 1848 aa17.3■□□□□ 0.36
EXOSC9-202ENST00000379663 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
EXOSC9-202ENST00000379663 L3MBTL2Q969R5 705 aa17.28■□□□□ 0.36
EXOSC9-202ENST00000379663 C3P01024 1663 aa17.28■□□□□ 0.36
EXOSC9-202ENST00000379663 ERVK-7P63135 1459 aa17.27■□□□□ 0.36
EXOSC9-202ENST00000379663 PPLO60437 1756 aa17.27■□□□□ 0.36
EXOSC9-202ENST00000379663 UHRF1BP1Q6BDS2 1440 aa17.26■□□□□ 0.35
EXOSC9-202ENST00000379663 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
EXOSC9-202ENST00000379663 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
EXOSC9-202ENST00000379663 TMEM131LA2VDJ0 1609 aa17.23■□□□□ 0.35
EXOSC9-202ENST00000379663 MADDQ8WXG6 1647 aa17.23■□□□□ 0.35
EXOSC9-202ENST00000379663 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
EXOSC9-202ENST00000379663 MLECQ14165 292 aa17.21■□□□□ 0.35
EXOSC9-202ENST00000379663 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.35
EXOSC9-202ENST00000379663 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
EXOSC9-202ENST00000379663 RIMS1Q86UR5 1692 aaKnown RBP17.2■□□□□ 0.34
EXOSC9-202ENST00000379663 ZMYM3Q14202 1370 aa17.2■□□□□ 0.34
EXOSC9-202ENST00000379663 RALGAPBQ86X10 1494 aa17.19■□□□□ 0.34
EXOSC9-202ENST00000379663 LAMC1P11047 1609 aa17.19■□□□□ 0.34
EXOSC9-202ENST00000379663 MYOM2P54296 1465 aa17.19■□□□□ 0.34
EXOSC9-202ENST00000379663 PRAG1Q86YV5 1406 aa17.18■□□□□ 0.34
EXOSC9-202ENST00000379663 NBPF8Q3BBV2 869 aa17.16■□□□□ 0.34
EXOSC9-202ENST00000379663 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
EXOSC9-202ENST00000379663 NRXN1Q9ULB1 1477 aa17.15■□□□□ 0.34
EXOSC9-202ENST00000379663 UBR1Q8IWV7 1749 aa17.15■□□□□ 0.34
EXOSC9-202ENST00000379663 SLC52A1Q9NWF4 448 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms