RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ASXL2Q76L83 1435 aa20.66■□□□□ 0.9
PRNP-201ENST00000379440 ARAP3Q8WWN8 1544 aa20.65■□□□□ 0.9
PRNP-201ENST00000379440 PLA2R1Q13018 1463 aa20.65■□□□□ 0.9
PRNP-201ENST00000379440 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
PRNP-201ENST00000379440 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.89
PRNP-201ENST00000379440 FANCAO15360 1455 aa20.64■□□□□ 0.89
PRNP-201ENST00000379440 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
PRNP-201ENST00000379440 CARD11Q9BXL7 1154 aa20.62■□□□□ 0.89
PRNP-201ENST00000379440 ABCA9Q8IUA7 1624 aa20.62■□□□□ 0.89
PRNP-201ENST00000379440 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
PRNP-201ENST00000379440 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
PRNP-201ENST00000379440 KDM5CP41229 1560 aa20.6■□□□□ 0.89
PRNP-201ENST00000379440 ZFYVE16Q7Z3T8 1539 aa20.59■□□□□ 0.89
PRNP-201ENST00000379440 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
PRNP-201ENST00000379440 BCORL1Q5H9F3 1711 aa20.59■□□□□ 0.89
PRNP-201ENST00000379440 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
PRNP-201ENST00000379440 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
PRNP-201ENST00000379440 POLR1AO95602 1720 aaPredicted RBP20.58■□□□□ 0.88
PRNP-201ENST00000379440 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
PRNP-201ENST00000379440 ANP32EQ9BTT0 268 aa20.57■□□□□ 0.88
PRNP-201ENST00000379440 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
PRNP-201ENST00000379440 ADGRL1O94910 1474 aa20.56■□□□□ 0.88
PRNP-201ENST00000379440 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
PRNP-201ENST00000379440 CCDC184Q52MB2 194 aa20.55■□□□□ 0.88
PRNP-201ENST00000379440 ST20-MTHFSA0A0A6YYL1 179 aa20.53■□□□□ 0.88
PRNP-201ENST00000379440 ROCK2O75116 1388 aaKnown RBP20.53■□□□□ 0.88
PRNP-201ENST00000379440 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
PRNP-201ENST00000379440 A2MP01023 1474 aa20.52■□□□□ 0.88
PRNP-201ENST00000379440 PRAG1Q86YV5 1406 aa20.52■□□□□ 0.88
PRNP-201ENST00000379440 ATP10AO60312 1499 aa20.51■□□□□ 0.87
PRNP-201ENST00000379440 NBPF1Q3BBV0 1214 aa20.5■□□□□ 0.87
PRNP-201ENST00000379440 INO80Q9ULG1 1556 aaPredicted RBP20.5■□□□□ 0.87
PRNP-201ENST00000379440 SUPT16HQ9Y5B9 1047 aaKnown RBP20.5■□□□□ 0.87
PRNP-201ENST00000379440 KIF3BO15066 747 aa20.49■□□□□ 0.87
PRNP-201ENST00000379440 CNGB1Q14028 1251 aaPredicted RBP20.48■□□□□ 0.87
PRNP-201ENST00000379440 E9PCH4 1651 aa20.47■□□□□ 0.87
PRNP-201ENST00000379440 TRPM1Q7Z4N2 1603 aa20.47■□□□□ 0.87
PRNP-201ENST00000379440 DAXXQ9UER7 740 aaPredicted RBP20.46■□□□□ 0.87
PRNP-201ENST00000379440 ARID4BQ4LE39 1312 aaPredicted RBP20.46■□□□□ 0.87
PRNP-201ENST00000379440 HNRNPUQ00839 825 aaKnown RBP eCLIP20.46■□□□□ 0.87
PRNP-201ENST00000379440 DHX29Q7Z478 1369 aaKnown RBP20.45■□□□□ 0.86
PRNP-201ENST00000379440 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
PRNP-201ENST00000379440 DEPDC5O75140 1603 aa20.44■□□□□ 0.86
PRNP-201ENST00000379440 MRS2Q9HD23 443 aa20.43■□□□□ 0.86
PRNP-201ENST00000379440 KANK1Q14678 1352 aa20.41■□□□□ 0.86
PRNP-201ENST00000379440 FAM9BQ8IZU0 186 aa20.41■□□□□ 0.86
PRNP-201ENST00000379440 KIDINS220Q9ULH0 1771 aa20.4■□□□□ 0.86
PRNP-201ENST00000379440 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.86
PRNP-201ENST00000379440 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
PRNP-201ENST00000379440 PTPRTO14522 1441 aa20.38■□□□□ 0.85
PRNP-201ENST00000379440 VWDEQ8N2E2 1590 aa20.38■□□□□ 0.85
PRNP-201ENST00000379440 TRPM2O94759 1503 aa20.38■□□□□ 0.85
PRNP-201ENST00000379440 TET3O43151 1660 aa20.38■□□□□ 0.85
PRNP-201ENST00000379440 SPHKAPQ2M3C7 1700 aa20.37■□□□□ 0.85
PRNP-201ENST00000379440 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
PRNP-201ENST00000379440 CLTCL1P53675 1640 aa20.35■□□□□ 0.85
PRNP-201ENST00000379440 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
PRNP-201ENST00000379440 PRDM15P57071 1507 aaPredicted RBP20.34■□□□□ 0.85
PRNP-201ENST00000379440 POGZQ7Z3K3 1410 aa20.34■□□□□ 0.85
PRNP-201ENST00000379440 FKBP8Q14318 412 aa20.33■□□□□ 0.84
PRNP-201ENST00000379440 CYB5RLQ6IPT4 315 aa20.32■□□□□ 0.84
PRNP-201ENST00000379440 TESK2Q96S53 571 aa20.31■□□□□ 0.84
PRNP-201ENST00000379440 CEP152O94986 1710 aa20.31■□□□□ 0.84
PRNP-201ENST00000379440 LAMC1P11047 1609 aa20.31■□□□□ 0.84
PRNP-201ENST00000379440 CFAP74Q9C0B2 1584 aa20.31■□□□□ 0.84
PRNP-201ENST00000379440 RAPGEF3O95398 923 aa20.3■□□□□ 0.84
PRNP-201ENST00000379440 UGGT1Q9NYU2 1555 aa20.29■□□□□ 0.84
PRNP-201ENST00000379440 BCANQ96GW7 911 aa20.29■□□□□ 0.84
PRNP-201ENST00000379440 DISP3Q9P2K9 1392 aa20.28■□□□□ 0.84
PRNP-201ENST00000379440 MADDQ8WXG6 1647 aa20.28■□□□□ 0.84
PRNP-201ENST00000379440 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
PRNP-201ENST00000379440 GGT6Q6P531 493 aa20.28■□□□□ 0.84
PRNP-201ENST00000379440 FRMPD1Q5SYB0 1578 aa20.26■□□□□ 0.83
PRNP-201ENST00000379440 RNF17Q9BXT8 1623 aaKnown RBP20.26■□□□□ 0.83
PRNP-201ENST00000379440 EFCAB6Q5THR3 1501 aa20.26■□□□□ 0.83
PRNP-201ENST00000379440 COL17A1Q9UMD9 1497 aaPredicted RBP20.25■□□□□ 0.83
PRNP-201ENST00000379440 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
PRNP-201ENST00000379440 PPRC1Q5VV67 1664 aaKnown RBP20.25■□□□□ 0.83
PRNP-201ENST00000379440 NEO1Q92859 1461 aa20.23■□□□□ 0.83
PRNP-201ENST00000379440 NEFLP07196 543 aa20.23■□□□□ 0.83
PRNP-201ENST00000379440 TMF1P82094 1093 aa20.22■□□□□ 0.83
PRNP-201ENST00000379440 STAC3Q96MF2 364 aa20.22■□□□□ 0.83
PRNP-201ENST00000379440 ABCA6Q8N139 1617 aa20.22■□□□□ 0.83
PRNP-201ENST00000379440 LMTK2Q8IWU2 1503 aa20.21■□□□□ 0.83
PRNP-201ENST00000379440 PER1O15534 1290 aaPredicted RBP20.2■□□□□ 0.82
PRNP-201ENST00000379440 TMC1Q8TDI8 760 aa20.2■□□□□ 0.82
PRNP-201ENST00000379440 ZBED9Q6R2W3 1325 aa20.19■□□□□ 0.82
PRNP-201ENST00000379440 RALBP1Q15311 655 aa20.18■□□□□ 0.82
PRNP-201ENST00000379440 PNISRQ8TF01 805 aaKnown RBP20.18■□□□□ 0.82
PRNP-201ENST00000379440 ADGRF5Q8IZF2 1346 aa20.18■□□□□ 0.82
PRNP-201ENST00000379440 WASHC2CQ9Y4E1 1318 aa20.18■□□□□ 0.82
PRNP-201ENST00000379440 PANK3Q9H999 370 aa20.18■□□□□ 0.82
PRNP-201ENST00000379440 NPATQ14207 1427 aa20.17■□□□□ 0.82
PRNP-201ENST00000379440 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
PRNP-201ENST00000379440 CHGAP10645 457 aaKnown RBP20.17■□□□□ 0.82
PRNP-201ENST00000379440 CFAP70Q5T0N1 1121 aa20.17■□□□□ 0.82
PRNP-201ENST00000379440 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
PRNP-201ENST00000379440 IQGAP1P46940 1657 aa20.17■□□□□ 0.82
PRNP-201ENST00000379440 KIF1BO60333 1816 aa20.16■□□□□ 0.82
PRNP-201ENST00000379440 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms