RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PLIN1O60240 522 aa24.02■■□□□ 1.44
GNE-201ENST00000377902 RGL3Q3MIN7 710 aa24.02■■□□□ 1.44
GNE-201ENST00000377902 NBPF1Q3BBV0 1214 aa24.02■■□□□ 1.44
GNE-201ENST00000377902 TSPY4P0CV99 314 aa24.01■■□□□ 1.43
GNE-201ENST00000377902 TSPY10P0CW01 314 aa24.01■■□□□ 1.43
GNE-201ENST00000377902 PLEKHD1A6NEE1 506 aa24■■□□□ 1.43
GNE-201ENST00000377902 CC2D1BQ5T0F9 858 aaKnown RBP23.99■■□□□ 1.43
GNE-201ENST00000377902 ADCY10Q96PN6 1610 aa23.99■■□□□ 1.43
GNE-201ENST00000377902 ARHGEF12Q9NZN5 1544 aa23.99■■□□□ 1.43
GNE-201ENST00000377902 PDE4AP27815 886 aa23.98■■□□□ 1.43
GNE-201ENST00000377902 NLRP13Q86W25 1043 aa23.98■■□□□ 1.43
GNE-201ENST00000377902 CDC42BPAQ5VT25 1732 aa23.98■■□□□ 1.43
GNE-201ENST00000377902 RTL5Q5HYW3 569 aaPredicted RBP23.98■■□□□ 1.43
GNE-201ENST00000377902 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
GNE-201ENST00000377902 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
GNE-201ENST00000377902 EIF4G3O43432 1585 aaKnown RBP23.97■■□□□ 1.43
GNE-201ENST00000377902 PER1O15534 1290 aaPredicted RBP23.96■■□□□ 1.43
GNE-201ENST00000377902 LAS1LQ9Y4W2 734 aaKnown RBP23.96■■□□□ 1.43
GNE-201ENST00000377902 KTN1Q86UP2 1357 aaKnown RBP23.95■■□□□ 1.43
GNE-201ENST00000377902 E9PCH4 1651 aa23.95■■□□□ 1.42
GNE-201ENST00000377902 PARD3Q8TEW0 1356 aa23.94■■□□□ 1.42
GNE-201ENST00000377902 TCERG1O14776 1098 aaKnown RBP23.94■■□□□ 1.42
GNE-201ENST00000377902 ABCC10Q5T3U5 1492 aa23.92■■□□□ 1.42
GNE-201ENST00000377902 BACH2Q9BYV9 841 aa23.92■■□□□ 1.42
GNE-201ENST00000377902 ATP10BO94823 1461 aa23.9■■□□□ 1.42
GNE-201ENST00000377902 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
GNE-201ENST00000377902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.422e-6■□□□□ 8.5
GNE-201ENST00000377902 SHANK2Q9UPX8 1470 aa23.89■■□□□ 1.41
GNE-201ENST00000377902 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
GNE-201ENST00000377902 PTPRGP23470 1445 aa23.88■■□□□ 1.41
GNE-201ENST00000377902 PRAG1Q86YV5 1406 aa23.88■■□□□ 1.41
GNE-201ENST00000377902 PDE3BQ13370 1112 aa23.88■■□□□ 1.41
GNE-201ENST00000377902 CRBNQ96SW2 442 aa23.88■■□□□ 1.41
GNE-201ENST00000377902 DISP3Q9P2K9 1392 aa23.88■■□□□ 1.41
GNE-201ENST00000377902 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
GNE-201ENST00000377902 PANK3Q9H999 370 aa23.87■■□□□ 1.41
GNE-201ENST00000377902 C20orf194Q5TEA3 1177 aa23.85■■□□□ 1.41
GNE-201ENST00000377902 FAM135AQ9P2D6 1515 aa23.84■■□□□ 1.41
GNE-201ENST00000377902 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
GNE-201ENST00000377902 TESK2Q96S53 571 aa23.84■■□□□ 1.41
GNE-201ENST00000377902 NEFMP07197 916 aa23.83■■□□□ 1.41
GNE-201ENST00000377902 TRPM1Q7Z4N2 1603 aa23.83■■□□□ 1.41
GNE-201ENST00000377902 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
GNE-201ENST00000377902 ABCA8O94911 1581 aa23.81■■□□□ 1.4
GNE-201ENST00000377902 MS4A1P11836 297 aa23.79■■□□□ 1.4
GNE-201ENST00000377902 PLA2R1Q13018 1463 aa23.79■■□□□ 1.4
GNE-201ENST00000377902 A2MP01023 1474 aa23.78■■□□□ 1.4
GNE-201ENST00000377902 IL27Q8NEV9 243 aa23.77■■□□□ 1.4
GNE-201ENST00000377902 ADAMTS8Q9UP79 889 aa23.77■■□□□ 1.4
GNE-201ENST00000377902 COL17A1Q9UMD9 1497 aaPredicted RBP23.76■■□□□ 1.39
GNE-201ENST00000377902 BLMP54132 1417 aaPredicted RBP23.75■■□□□ 1.39
GNE-201ENST00000377902 SLC4A3P48751 1232 aa23.74■■□□□ 1.39
GNE-201ENST00000377902 NUP160Q12769 1436 aa23.74■■□□□ 1.39
GNE-201ENST00000377902 SAMD9LQ8IVG5 1584 aa23.73■■□□□ 1.39
GNE-201ENST00000377902 CCDC141Q6ZP82 1450 aa23.72■■□□□ 1.39
GNE-201ENST00000377902 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
GNE-201ENST00000377902 GPRASP1Q5JY77 1395 aa23.72■■□□□ 1.39
GNE-201ENST00000377902 ARHGEF5Q12774 1597 aa23.71■■□□□ 1.39
GNE-201ENST00000377902 RTN4Q9NQC3 1192 aaKnown RBP23.71■■□□□ 1.39
GNE-201ENST00000377902 TMF1P82094 1093 aa23.7■■□□□ 1.38
GNE-201ENST00000377902 WASHC2CQ9Y4E1 1318 aa23.68■■□□□ 1.38
GNE-201ENST00000377902 CDC42BPBQ9Y5S2 1711 aa23.68■■□□□ 1.38
GNE-201ENST00000377902 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
GNE-201ENST00000377902 PLEKHH1Q9ULM0 1364 aa23.67■■□□□ 1.38
GNE-201ENST00000377902 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
GNE-201ENST00000377902 ZMYM4Q5VZL5 1548 aa23.65■■□□□ 1.38
GNE-201ENST00000377902 SYCP2Q9BX26 1530 aa23.65■■□□□ 1.38
GNE-201ENST00000377902 PLEKHH2Q8IVE3 1493 aa23.65■■□□□ 1.38
GNE-201ENST00000377902 KDM2BQ8NHM5 1336 aa23.64■■□□□ 1.38
GNE-201ENST00000377902 DUSP27Q5VZP5 1158 aa23.64■■□□□ 1.37
GNE-201ENST00000377902 PPP2R1AP30153 589 aa23.63■■□□□ 1.37
GNE-201ENST00000377902 MYO5CQ9NQX4 1742 aa23.62■■□□□ 1.37
GNE-201ENST00000377902 MAGI2Q86UL8 1455 aa23.62■■□□□ 1.37
GNE-201ENST00000377902 USP35Q9P2H5 1018 aa23.62■■□□□ 1.37
GNE-201ENST00000377902 PPM1GO15355 546 aaPredicted RBP23.61■■□□□ 1.37
GNE-201ENST00000377902 WDR43Q15061 677 aaKnown RBP eCLIP23.6■■□□□ 1.37
GNE-201ENST00000377902 RSPH4AQ5TD94 716 aa23.6■■□□□ 1.37
GNE-201ENST00000377902 KNSTRNQ9Y448 316 aa23.6■■□□□ 1.37
GNE-201ENST00000377902 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
GNE-201ENST00000377902 CCDC146Q8IYE0 955 aa23.59■■□□□ 1.37
GNE-201ENST00000377902 ANO8Q9HCE9 1232 aaPredicted RBP23.59■■□□□ 1.37
GNE-201ENST00000377902 INSRP06213 1382 aa23.58■■□□□ 1.36
GNE-201ENST00000377902 DDRGK1Q96HY6 314 aa23.57■■□□□ 1.36
GNE-201ENST00000377902 ARHGAP5Q13017 1502 aa23.57■■□□□ 1.36
GNE-201ENST00000377902 WDR7Q9Y4E6 1490 aa23.56■■□□□ 1.36
GNE-201ENST00000377902 UNC13BO14795 1591 aa23.56■■□□□ 1.36
GNE-201ENST00000377902 RGS3P49796 1198 aa23.56■■□□□ 1.36
GNE-201ENST00000377902 AMER1Q5JTC6 1135 aaPredicted RBP23.56■■□□□ 1.36
GNE-201ENST00000377902 SPINK5Q9NQ38 1064 aaPredicted RBP23.55■■□□□ 1.36
GNE-201ENST00000377902 LAMC1P11047 1609 aa23.55■■□□□ 1.36
GNE-201ENST00000377902 GOLGA2Q08379 1002 aa23.55■■□□□ 1.36
GNE-201ENST00000377902 C8orf34Q49A92 452 aa23.55■■□□□ 1.36
GNE-201ENST00000377902 CENPQQ7L2Z9 268 aaPredicted RBP23.55■■□□□ 1.36
GNE-201ENST00000377902 NFKBIBQ15653 356 aa23.54■■□□□ 1.36
GNE-201ENST00000377902 ZNF521Q96K83 1311 aa23.54■■□□□ 1.36
GNE-201ENST00000377902 TTC37Q6PGP7 1564 aa23.54■■□□□ 1.36
GNE-201ENST00000377902 EIF2AK4Q9P2K8 1649 aaKnown RBP23.5■■□□□ 1.35
GNE-201ENST00000377902 IQGAP3Q86VI3 1631 aa23.5■■□□□ 1.35
GNE-201ENST00000377902 FAM161AQ3B820 660 aa23.5■■□□□ 1.35
GNE-201ENST00000377902 BCAR3O75815 825 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms