RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 NUTM2FA1L443 756 aa23.68■■□□□ 1.38
TBC1D4-201ENST00000377625 CSPP1Q1MSJ5 1256 aa23.67■■□□□ 1.38
TBC1D4-201ENST00000377625 ABCC8Q09428 1581 aa23.67■■□□□ 1.38
TBC1D4-201ENST00000377625 TOMM22Q9NS69 142 aa23.66■■□□□ 1.38
TBC1D4-201ENST00000377625 FOXD4L1Q9NU39 408 aa23.66■■□□□ 1.38
TBC1D4-201ENST00000377625 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
TBC1D4-201ENST00000377625 PDE3BQ13370 1112 aa23.65■■□□□ 1.38
TBC1D4-201ENST00000377625 GOLGA6L3A6NEY3 463 aa23.65■■□□□ 1.38
TBC1D4-201ENST00000377625 FRAT2O75474 233 aaPredicted RBP23.65■■□□□ 1.38
TBC1D4-201ENST00000377625 RSPH4AQ5TD94 716 aa23.64■■□□□ 1.38
TBC1D4-201ENST00000377625 TRAK1Q9UPV9 953 aa23.64■■□□□ 1.38
TBC1D4-201ENST00000377625 GTF2E1P29083 439 aaPredicted RBP23.64■■□□□ 1.38
TBC1D4-201ENST00000377625 CREBRFQ8IUR6 639 aa23.61■■□□□ 1.37
TBC1D4-201ENST00000377625 ARID3AQ99856 593 aa23.61■■□□□ 1.37
TBC1D4-201ENST00000377625 ST18O60284 1047 aa23.6■■□□□ 1.37
TBC1D4-201ENST00000377625 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
TBC1D4-201ENST00000377625 RRP7AQ9Y3A4 280 aaKnown RBP23.6■■□□□ 1.37
TBC1D4-201ENST00000377625 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
TBC1D4-201ENST00000377625 IPO9Q96P70 1041 aaKnown RBP23.59■■□□□ 1.37
TBC1D4-201ENST00000377625 PHLDB1Q86UU1 1377 aa23.59■■□□□ 1.37
TBC1D4-201ENST00000377625 KIF3AQ9Y496 699 aa23.57■■□□□ 1.36
TBC1D4-201ENST00000377625 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
TBC1D4-201ENST00000377625 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
TBC1D4-201ENST00000377625 PDE4CQ08493 712 aa23.56■■□□□ 1.36
TBC1D4-201ENST00000377625 SF3A1Q15459 793 aaKnown RBP23.55■■□□□ 1.36
TBC1D4-201ENST00000377625 FHOD3Q2V2M9 1422 aa23.55■■□□□ 1.36
TBC1D4-201ENST00000377625 MARCH6O60337 910 aa23.55■■□□□ 1.36
TBC1D4-201ENST00000377625 FOXD4L5Q5VV16 416 aaPredicted RBP23.54■■□□□ 1.36
TBC1D4-201ENST00000377625 FOXD4L4Q8WXT5 416 aaPredicted RBP23.54■■□□□ 1.36
TBC1D4-201ENST00000377625 ELL2O00472 640 aaPredicted RBP23.53■■□□□ 1.36
TBC1D4-201ENST00000377625 VPS53Q5VIR6 699 aa23.53■■□□□ 1.36
TBC1D4-201ENST00000377625 PANK3Q9H999 370 aa23.53■■□□□ 1.36
TBC1D4-201ENST00000377625 MYBBP1AQ9BQG0 1328 aaKnown RBP23.53■■□□□ 1.36
TBC1D4-201ENST00000377625 SMARCA2P51531 1590 aa23.53■■□□□ 1.36
TBC1D4-201ENST00000377625 PHF14O94880 888 aa23.52■■□□□ 1.36
TBC1D4-201ENST00000377625 ST20-MTHFSA0A0A6YYL1 179 aa23.52■■□□□ 1.36
TBC1D4-201ENST00000377625 RILPL2Q969X0 211 aa23.52■■□□□ 1.36
TBC1D4-201ENST00000377625 A0A0U1RQG5 324 aaPredicted RBP23.51■■□□□ 1.35
TBC1D4-201ENST00000377625 PRM3Q9NNZ6 103 aa23.51■■□□□ 1.35
TBC1D4-201ENST00000377625 COG3Q96JB2 828 aa23.51■■□□□ 1.35
TBC1D4-201ENST00000377625 C1orf141Q5JVX7 400 aa23.5■■□□□ 1.35
TBC1D4-201ENST00000377625 MROH2BQ7Z745 1585 aa23.5■■□□□ 1.35
TBC1D4-201ENST00000377625 CCDC144AA2RUR9 1427 aa23.49■■□□□ 1.35
TBC1D4-201ENST00000377625 BCL2L13Q9BXK5 485 aa23.49■■□□□ 1.35
TBC1D4-201ENST00000377625 GOLGA6L1Q8N7Z2 621 aa23.48■■□□□ 1.35
TBC1D4-201ENST00000377625 H3BQV1 296 aa23.48■■□□□ 1.35
TBC1D4-201ENST00000377625 IFFO2Q5TF58 517 aa23.48■■□□□ 1.35
TBC1D4-201ENST00000377625 TPM3P06753 285 aa23.48■■□□□ 1.35
TBC1D4-201ENST00000377625 ANKRD45Q5TZF3 282 aa23.48■■□□□ 1.35
TBC1D4-201ENST00000377625 RAPGEF2Q9Y4G8 1499 aa23.48■■□□□ 1.35
TBC1D4-201ENST00000377625 CEP89Q96ST8 783 aa23.47■■□□□ 1.35
TBC1D4-201ENST00000377625 CGNL1Q0VF96 1302 aa23.46■■□□□ 1.35
TBC1D4-201ENST00000377625 JPH4Q96JJ6 628 aa23.46■■□□□ 1.35
TBC1D4-201ENST00000377625 TSHZ2Q9NRE2 1034 aa23.45■■□□□ 1.34
TBC1D4-201ENST00000377625 FAM184AQ8NB25 1140 aa23.45■■□□□ 1.34
TBC1D4-201ENST00000377625 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
TBC1D4-201ENST00000377625 TEFQ10587 303 aa23.44■■□□□ 1.34
TBC1D4-201ENST00000377625 EVC2Q86UK5 1308 aa23.44■■□□□ 1.34
TBC1D4-201ENST00000377625 UACAQ9BZF9 1416 aa23.44■■□□□ 1.34
TBC1D4-201ENST00000377625 CENPQQ7L2Z9 268 aaPredicted RBP23.44■■□□□ 1.34
TBC1D4-201ENST00000377625 PES1O00541 588 aaKnown RBP23.44■■□□□ 1.34
TBC1D4-201ENST00000377625 VGFO15240 615 aaPredicted RBP23.44■■□□□ 1.34
TBC1D4-201ENST00000377625 EVA1CP58658 441 aa23.43■■□□□ 1.34
TBC1D4-201ENST00000377625 DDX11L8A8MPP1 907 aa23.42■■□□□ 1.34
TBC1D4-201ENST00000377625 E9PSI1 815 aa23.42■■□□□ 1.34
TBC1D4-201ENST00000377625 AKAP17AQ02040 695 aaKnown RBP23.42■■□□□ 1.34
TBC1D4-201ENST00000377625 TPD52L1Q16890 204 aaPredicted RBP23.41■■□□□ 1.34
TBC1D4-201ENST00000377625 CHMP4CQ96CF2 233 aa23.41■■□□□ 1.34
TBC1D4-201ENST00000377625 PLIN1O60240 522 aa23.4■■□□□ 1.34
TBC1D4-201ENST00000377625 NEXNQ0ZGT2 675 aa23.39■■□□□ 1.34
TBC1D4-201ENST00000377625 TTC5Q8N0Z6 440 aa23.39■■□□□ 1.34
TBC1D4-201ENST00000377625 NGEFQ8N5V2 710 aa23.39■■□□□ 1.34
TBC1D4-201ENST00000377625 DIAPH3Q9NSV4 1193 aa23.38■■□□□ 1.33
TBC1D4-201ENST00000377625 ATP6V1DQ9Y5K8 247 aa23.38■■□□□ 1.33
TBC1D4-201ENST00000377625 FAM161AQ3B820 660 aa23.38■■□□□ 1.33
TBC1D4-201ENST00000377625 MINK1Q8N4C8 1332 aaPredicted RBP23.38■■□□□ 1.33
TBC1D4-201ENST00000377625 EIF2S2P20042 333 aaKnown RBP23.37■■□□□ 1.33
TBC1D4-201ENST00000377625 SYNE3Q6ZMZ3 975 aa23.37■■□□□ 1.33
TBC1D4-201ENST00000377625 TNNT3P45378 269 aaPredicted RBP23.36■■□□□ 1.33
TBC1D4-201ENST00000377625 FOXD4L6Q3SYB3 417 aaPredicted RBP23.36■■□□□ 1.33
TBC1D4-201ENST00000377625 FOXD4L3Q6VB84 417 aaPredicted RBP23.36■■□□□ 1.33
TBC1D4-201ENST00000377625 C9orf78Q9NZ63 289 aaPredicted RBP23.36■■□□□ 1.33
TBC1D4-201ENST00000377625 DDX49Q9Y6V7 483 aaKnown RBP23.36■■□□□ 1.33
TBC1D4-201ENST00000377625 LRRFIP1Q32MZ4 808 aaKnown RBP23.35■■□□□ 1.33
TBC1D4-201ENST00000377625 TSR1Q2NL82 804 aaKnown RBP23.35■■□□□ 1.33
TBC1D4-201ENST00000377625 COG6Q9Y2V7 657 aa23.35■■□□□ 1.33
TBC1D4-201ENST00000377625 GOLGA6L19H0YKK7 550 aa23.34■■□□□ 1.33
TBC1D4-201ENST00000377625 USP35Q9P2H5 1018 aa23.34■■□□□ 1.33
TBC1D4-201ENST00000377625 MSH5O43196 834 aa23.34■■□□□ 1.33
TBC1D4-201ENST00000377625 MCTP1Q6DN14 999 aa23.34■■□□□ 1.33
TBC1D4-201ENST00000377625 PDE4AP27815 886 aa23.33■■□□□ 1.33
TBC1D4-201ENST00000377625 RRP1P56182 461 aaKnown RBP23.33■■□□□ 1.33
TBC1D4-201ENST00000377625 BECN2A8MW95 431 aa23.33■■□□□ 1.32
TBC1D4-201ENST00000377625 EXOC6Q8TAG9 804 aa23.33■■□□□ 1.32
TBC1D4-201ENST00000377625 CRBNQ96SW2 442 aa23.33■■□□□ 1.32
TBC1D4-201ENST00000377625 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
TBC1D4-201ENST00000377625 RUFY2Q8WXA3 655 aa23.32■■□□□ 1.32
TBC1D4-201ENST00000377625 NOL10Q9BSC4 688 aaKnown RBP23.32■■□□□ 1.32
TBC1D4-201ENST00000377625 CPLX2Q6PUV4 134 aaKnown RBP23.32■■□□□ 1.32
TBC1D4-201ENST00000377625 APAF1O14727 1248 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms