RNA–Protein interactions for RNA: ENST00000377619.9

COMMD6-204, Transcript of COMM domain containing 6, humanhuman

TSL 2 BASIC

Gene COMMD6, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-204ENST00000377619 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
COMMD6-204ENST00000377619 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
COMMD6-204ENST00000377619 A0A0G2JS52 829 aa11.47□□□□□ -0.57
COMMD6-204ENST00000377619 RGS20O76081 388 aa11.47□□□□□ -0.57
COMMD6-204ENST00000377619 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
COMMD6-204ENST00000377619 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.57
COMMD6-204ENST00000377619 DPYSL4O14531 572 aa11.45□□□□□ -0.58
COMMD6-204ENST00000377619 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
COMMD6-204ENST00000377619 BCAMP50895 628 aa11.44□□□□□ -0.58
COMMD6-204ENST00000377619 LAPTM4BQ86VI4 370 aa11.44□□□□□ -0.58
COMMD6-204ENST00000377619 EPAS1Q99814 870 aa11.43□□□□□ -0.58
COMMD6-204ENST00000377619 SOWAHBA6NEL2 793 aa11.41□□□□□ -0.58
COMMD6-204ENST00000377619 ONECUT3O60422 494 aaPredicted RBP11.41□□□□□ -0.58
COMMD6-204ENST00000377619 RBM33Q96EV2 1170 aaKnown RBP11.41□□□□□ -0.58
COMMD6-204ENST00000377619 ZFRQ96KR1 1074 aaKnown RBP11.41□□□□□ -0.58
COMMD6-204ENST00000377619 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
COMMD6-204ENST00000377619 DDX12PQ92771 950 aa11.39□□□□□ -0.59
COMMD6-204ENST00000377619 IRX2Q9BZI1 471 aaPredicted RBP11.39□□□□□ -0.59
COMMD6-204ENST00000377619 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
COMMD6-204ENST00000377619 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
COMMD6-204ENST00000377619 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
COMMD6-204ENST00000377619 FAM98CQ17RN3 349 aaKnown RBP11.33□□□□□ -0.6
COMMD6-204ENST00000377619 NYAP1Q6ZVC0 841 aa11.33□□□□□ -0.6
COMMD6-204ENST00000377619 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
COMMD6-204ENST00000377619 KCNC4Q03721 635 aa11.3□□□□□ -0.6
COMMD6-204ENST00000377619 NBR1Q14596 966 aa11.3□□□□□ -0.6
COMMD6-204ENST00000377619 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
COMMD6-204ENST00000377619 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
COMMD6-204ENST00000377619 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
COMMD6-204ENST00000377619 MAP3K7O43318 606 aa11.28□□□□□ -0.6
COMMD6-204ENST00000377619 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
COMMD6-204ENST00000377619 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
COMMD6-204ENST00000377619 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
COMMD6-204ENST00000377619 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
COMMD6-204ENST00000377619 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
COMMD6-204ENST00000377619 PDIA6Q15084 440 aa11.26□□□□□ -0.61
COMMD6-204ENST00000377619 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
COMMD6-204ENST00000377619 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
COMMD6-204ENST00000377619 SMAPO00193 183 aa11.21□□□□□ -0.61
COMMD6-204ENST00000377619 PPP4CP60510 307 aa11.21□□□□□ -0.61
COMMD6-204ENST00000377619 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
COMMD6-204ENST00000377619 PRSS12P56730 875 aa11.2□□□□□ -0.62
COMMD6-204ENST00000377619 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
COMMD6-204ENST00000377619 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
COMMD6-204ENST00000377619 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
COMMD6-204ENST00000377619 E2F4Q16254 413 aa11.19□□□□□ -0.62
COMMD6-204ENST00000377619 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
COMMD6-204ENST00000377619 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
COMMD6-204ENST00000377619 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
COMMD6-204ENST00000377619 Q6ZNB5 142 aa11.16□□□□□ -0.62
COMMD6-204ENST00000377619 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
COMMD6-204ENST00000377619 TATDN2Q93075 761 aa11.15□□□□□ -0.62
COMMD6-204ENST00000377619 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
COMMD6-204ENST00000377619 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
COMMD6-204ENST00000377619 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
COMMD6-204ENST00000377619 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
COMMD6-204ENST00000377619 OSBPP22059 807 aa11.11□□□□□ -0.63
COMMD6-204ENST00000377619 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
COMMD6-204ENST00000377619 CDHR5Q9HBB8 845 aa11.11□□□□□ -0.63
COMMD6-204ENST00000377619 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
COMMD6-204ENST00000377619 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
COMMD6-204ENST00000377619 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
COMMD6-204ENST00000377619 MTRQ99707 1265 aa11.09□□□□□ -0.63
COMMD6-204ENST00000377619 HDGFP51858 240 aaKnown RBP11.08□□□□□ -0.64
COMMD6-204ENST00000377619 CCDC180Q9P1Z9 1646 aa11.08□□□□□ -0.64
COMMD6-204ENST00000377619 IL21Q9HBE4 155 aa11.07□□□□□ -0.64
COMMD6-204ENST00000377619 GFRA3O60609 400 aa11.06□□□□□ -0.64
COMMD6-204ENST00000377619 RNF40O75150 1001 aa11.06□□□□□ -0.64
COMMD6-204ENST00000377619 LAPTM4AQ15012 233 aa11.05□□□□□ -0.64
COMMD6-204ENST00000377619 ZNF516Q92618 1163 aa11.05□□□□□ -0.64
COMMD6-204ENST00000377619 PPP1R18Q6NYC8 613 aa11.04□□□□□ -0.64
COMMD6-204ENST00000377619 PRKD2Q9BZL6 878 aa11.04□□□□□ -0.64
COMMD6-204ENST00000377619 APLP1P51693 650 aa11.03□□□□□ -0.64
COMMD6-204ENST00000377619 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
COMMD6-204ENST00000377619 NPDC1Q9NQX5 325 aaPredicted RBP11.02□□□□□ -0.65
COMMD6-204ENST00000377619 PADI6Q6TGC4 694 aa11□□□□□ -0.65
COMMD6-204ENST00000377619 TTC13Q8NBP0 860 aa11□□□□□ -0.65
COMMD6-204ENST00000377619 LCE2BO14633 110 aa10.99□□□□□ -0.65
COMMD6-204ENST00000377619 SWT1Q5T5J6 900 aaKnown RBP10.99□□□□□ -0.65
COMMD6-204ENST00000377619 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
COMMD6-204ENST00000377619 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
COMMD6-204ENST00000377619 TRAF7Q6Q0C0 670 aa10.98□□□□□ -0.65
COMMD6-204ENST00000377619 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
COMMD6-204ENST00000377619 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.65
COMMD6-204ENST00000377619 COPS2P61201 443 aa10.95□□□□□ -0.66
COMMD6-204ENST00000377619 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
COMMD6-204ENST00000377619 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
COMMD6-204ENST00000377619 NRG2O14511 850 aaPredicted RBP10.93□□□□□ -0.66
COMMD6-204ENST00000377619 EYA1Q99502 592 aa10.93□□□□□ -0.66
COMMD6-204ENST00000377619 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
COMMD6-204ENST00000377619 MLLT3P42568 568 aaPredicted RBP10.9□□□□□ -0.66
COMMD6-204ENST00000377619 GGCXP38435 758 aa10.89□□□□□ -0.67
COMMD6-204ENST00000377619 SLC4A3P48751 1232 aa10.89□□□□□ -0.67
COMMD6-204ENST00000377619 ZPR1O75312 459 aa10.88□□□□□ -0.67
COMMD6-204ENST00000377619 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
COMMD6-204ENST00000377619 PDZRN3Q9UPQ7 1066 aa10.86□□□□□ -0.67
COMMD6-204ENST00000377619 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
COMMD6-204ENST00000377619 PCDHB3Q9Y5E6 796 aa10.85□□□□□ -0.67
COMMD6-204ENST00000377619 PRR14Q9BWN1 585 aa10.84□□□□□ -0.67
COMMD6-204ENST00000377619 PTGDRQ13258 359 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms