RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
SF1-204ENST00000377390 FAM161AQ3B820 660 aa15.73■□□□□ 0.11
SF1-204ENST00000377390 RNF123Q5XPI4 1314 aa15.72■□□□□ 0.11
SF1-204ENST00000377390 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.72■□□□□ 0.11
SF1-204ENST00000377390 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.11
SF1-204ENST00000377390 KIF15Q9NS87 1388 aa15.71■□□□□ 0.11
SF1-204ENST00000377390 KIF3BO15066 747 aa15.7■□□□□ 0.1
SF1-204ENST00000377390 FAM43AQ8N2R8 423 aa15.7■□□□□ 0.1
SF1-204ENST00000377390 POGKQ9P215 609 aa15.7■□□□□ 0.1
SF1-204ENST00000377390 PDE3BQ13370 1112 aa15.69■□□□□ 0.1
SF1-204ENST00000377390 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
SF1-204ENST00000377390 KTN1Q86UP2 1357 aaKnown RBP15.69■□□□□ 0.1
SF1-204ENST00000377390 NEUROD2Q15784 382 aa15.69■□□□□ 0.1
SF1-204ENST00000377390 NBPF1Q3BBV0 1214 aa15.68■□□□□ 0.1
SF1-204ENST00000377390 BECN1Q14457 450 aa15.67■□□□□ 0.1
SF1-204ENST00000377390 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
SF1-204ENST00000377390 ANKRD30BQ9BXX2 1392 aa15.66■□□□□ 0.1
SF1-204ENST00000377390 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
SF1-204ENST00000377390 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
SF1-204ENST00000377390 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
SF1-204ENST00000377390 DHX29Q7Z478 1369 aaKnown RBP15.66■□□□□ 0.1
SF1-204ENST00000377390 EPRSP07814 1512 aaKnown RBP15.65■□□□□ 0.1
SF1-204ENST00000377390 CENPQQ7L2Z9 268 aaPredicted RBP15.65■□□□□ 0.1
SF1-204ENST00000377390 PANK3Q9H999 370 aa15.64■□□□□ 0.1
SF1-204ENST00000377390 STK26Q9P289 416 aa15.64■□□□□ 0.09
SF1-204ENST00000377390 RRAGDQ9NQL2 400 aaPredicted RBP15.63■□□□□ 0.09
SF1-204ENST00000377390 ADAMTS8Q9UP79 889 aa15.63■□□□□ 0.09
SF1-204ENST00000377390 ROCK2O75116 1388 aaKnown RBP15.63■□□□□ 0.09
SF1-204ENST00000377390 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
SF1-204ENST00000377390 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
SF1-204ENST00000377390 BRD4O60885 1362 aaPredicted RBP15.62■□□□□ 0.09
SF1-204ENST00000377390 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
SF1-204ENST00000377390 GOLGA2Q08379 1002 aa15.59■□□□□ 0.09
SF1-204ENST00000377390 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.08
SF1-204ENST00000377390 L1TD1Q5T7N2 865 aaKnown RBP15.58■□□□□ 0.08
SF1-204ENST00000377390 IQGAP2Q13576 1575 aa15.57■□□□□ 0.08
SF1-204ENST00000377390 NUTM2FA1L443 756 aa15.57■□□□□ 0.08
SF1-204ENST00000377390 COG6Q9Y2V7 657 aa15.57■□□□□ 0.08
SF1-204ENST00000377390 ANKRD30AQ9BXX3 1397 aa15.57■□□□□ 0.08
SF1-204ENST00000377390 RPRD2Q5VT52 1461 aaKnown RBP15.56■□□□□ 0.08
SF1-204ENST00000377390 KDM5BQ9UGL1 1544 aa15.56■□□□□ 0.08
SF1-204ENST00000377390 BCAR3O75815 825 aa15.56■□□□□ 0.08
SF1-204ENST00000377390 GRIN2AQ12879 1464 aa15.56■□□□□ 0.08
SF1-204ENST00000377390 GOLGA6L3A6NEY3 463 aa15.56■□□□□ 0.08
SF1-204ENST00000377390 CLUAP1Q96AJ1 413 aa15.56■□□□□ 0.08
SF1-204ENST00000377390 TRIM44Q96DX7 344 aaPredicted RBP15.56■□□□□ 0.08
SF1-204ENST00000377390 IFT140Q96RY7 1462 aa15.56■□□□□ 0.08
SF1-204ENST00000377390 RAPGEF3O95398 923 aa15.55■□□□□ 0.08
SF1-204ENST00000377390 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
SF1-204ENST00000377390 SOX12O15370 315 aa15.55■□□□□ 0.08
SF1-204ENST00000377390 BCL2L13Q9BXK5 485 aa15.54■□□□□ 0.08
SF1-204ENST00000377390 APAF1O14727 1248 aa15.53■□□□□ 0.08
SF1-204ENST00000377390 EFCAB2Q5VUJ9 269 aa15.53■□□□□ 0.08
SF1-204ENST00000377390 SPAG9O60271 1321 aaKnown RBP15.53■□□□□ 0.08
SF1-204ENST00000377390 SPATA31E1Q6ZUB1 1445 aa15.52■□□□□ 0.08
SF1-204ENST00000377390 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.08
SF1-204ENST00000377390 PANK1Q8TE04 598 aa15.52■□□□□ 0.08
SF1-204ENST00000377390 PANK2Q9BZ23 570 aa15.52■□□□□ 0.08
SF1-204ENST00000377390 TRAK1Q9UPV9 953 aa15.52■□□□□ 0.08
SF1-204ENST00000377390 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.08
SF1-204ENST00000377390 SEC24BO95487 1268 aa15.51■□□□□ 0.07
SF1-204ENST00000377390 ZBTB7CA1YPR0 619 aa15.51■□□□□ 0.07
SF1-204ENST00000377390 TMF1P82094 1093 aa15.51■□□□□ 0.07
SF1-204ENST00000377390 ABCC5O15440 1437 aa15.51■□□□□ 0.07
SF1-204ENST00000377390 KDM6BO15054 1643 aa15.51■□□□□ 0.07
SF1-204ENST00000377390 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
SF1-204ENST00000377390 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
SF1-204ENST00000377390 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
SF1-204ENST00000377390 DAPK1P53355 1430 aa15.49■□□□□ 0.07
SF1-204ENST00000377390 SLC24A1O60721 1099 aa15.49■□□□□ 0.07
SF1-204ENST00000377390 KIAA0586Q9BVV6 1533 aa15.49■□□□□ 0.07
SF1-204ENST00000377390 MFAP1P55081 439 aaKnown RBP15.49■□□□□ 0.07
SF1-204ENST00000377390 NUP153P49790 1475 aaKnown RBP15.48■□□□□ 0.07
SF1-204ENST00000377390 RRP7AQ9Y3A4 280 aaKnown RBP15.48■□□□□ 0.07
SF1-204ENST00000377390 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
SF1-204ENST00000377390 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
SF1-204ENST00000377390 IGHDP01880 384 aa15.47■□□□□ 0.07
SF1-204ENST00000377390 SUPT6HQ7KZ85 1726 aaKnown RBP15.47■□□□□ 0.07
SF1-204ENST00000377390 RBM10P98175 930 aaKnown RBP15.47■□□□□ 0.07
SF1-204ENST00000377390 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
SF1-204ENST00000377390 LRPPRCP42704 1394 aaKnown RBP15.46■□□□□ 0.07
SF1-204ENST00000377390 RRP9O43818 475 aaKnown RBP15.45■□□□□ 0.06
SF1-204ENST00000377390 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
SF1-204ENST00000377390 CUL7Q14999 1698 aa15.44■□□□□ 0.06
SF1-204ENST00000377390 TROQ12816 1431 aaPredicted RBP15.44■□□□□ 0.06
SF1-204ENST00000377390 EHBP1L1Q8N3D4 1523 aa15.44■□□□□ 0.06
SF1-204ENST00000377390 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
SF1-204ENST00000377390 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
SF1-204ENST00000377390 TEX14Q8IWB6 1497 aa15.43■□□□□ 0.06
SF1-204ENST00000377390 CFAP70Q5T0N1 1121 aa15.43■□□□□ 0.06
SF1-204ENST00000377390 XRCC6P12956 609 aaKnown RBP eCLIP15.42■□□□□ 0.061e-7■■■□□ 17.8
SF1-204ENST00000377390 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
SF1-204ENST00000377390 KIAA1107Q9UPP5 1409 aa15.42■□□□□ 0.06
SF1-204ENST00000377390 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
SF1-204ENST00000377390 FAM13BQ9NYF5 915 aa15.41■□□□□ 0.06
SF1-204ENST00000377390 DISP1Q96F81 1524 aa15.41■□□□□ 0.06
SF1-204ENST00000377390 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
SF1-204ENST00000377390 NCLP19338 710 aaKnown RBP15.41■□□□□ 0.06
SF1-204ENST00000377390 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
SF1-204ENST00000377390 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms