RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 SPATA31E1Q6ZUB1 1445 aa24.6■■□□□ 1.53
NKX2-2-201ENST00000377142 ZNF518AQ6AHZ1 1483 aa24.6■■□□□ 1.53
NKX2-2-201ENST00000377142 RALGAPBQ86X10 1494 aa24.6■■□□□ 1.53
NKX2-2-201ENST00000377142 PLA2R1Q13018 1463 aa24.59■■□□□ 1.53
NKX2-2-201ENST00000377142 KIDINS220Q9ULH0 1771 aa24.57■■□□□ 1.52
NKX2-2-201ENST00000377142 WASHC2AQ641Q2 1341 aa24.56■■□□□ 1.52
NKX2-2-201ENST00000377142 KDM5CP41229 1560 aa24.55■■□□□ 1.52
NKX2-2-201ENST00000377142 E9PCH4 1651 aa24.55■■□□□ 1.52
NKX2-2-201ENST00000377142 SCAF1Q9H7N4 1312 aaKnown RBP24.54■■□□□ 1.52
NKX2-2-201ENST00000377142 TET3O43151 1660 aa24.54■■□□□ 1.52
NKX2-2-201ENST00000377142 ANP32CO43423 234 aa24.54■■□□□ 1.52
NKX2-2-201ENST00000377142 VWDEQ8N2E2 1590 aa24.53■■□□□ 1.52
NKX2-2-201ENST00000377142 PRDM15P57071 1507 aaPredicted RBP24.53■■□□□ 1.52
NKX2-2-201ENST00000377142 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
NKX2-2-201ENST00000377142 DHX29Q7Z478 1369 aaKnown RBP24.52■■□□□ 1.52
NKX2-2-201ENST00000377142 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
NKX2-2-201ENST00000377142 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
NKX2-2-201ENST00000377142 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
NKX2-2-201ENST00000377142 CCDC7Q96M83 1385 aa24.51■■□□□ 1.51
NKX2-2-201ENST00000377142 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
NKX2-2-201ENST00000377142 NEO1Q92859 1461 aa24.5■■□□□ 1.51
NKX2-2-201ENST00000377142 USP47Q96K76 1375 aa24.49■■□□□ 1.51
NKX2-2-201ENST00000377142 SPHKAPQ2M3C7 1700 aa24.49■■□□□ 1.51
NKX2-2-201ENST00000377142 KANK1Q14678 1352 aa24.49■■□□□ 1.51
NKX2-2-201ENST00000377142 HECW2Q9P2P5 1572 aa24.48■■□□□ 1.51
NKX2-2-201ENST00000377142 MROH1Q8NDA8 1641 aa24.48■■□□□ 1.51
NKX2-2-201ENST00000377142 TRPM2O94759 1503 aa24.48■■□□□ 1.51
NKX2-2-201ENST00000377142 CNTLNQ9NXG0 1405 aa24.48■■□□□ 1.51
NKX2-2-201ENST00000377142 CCER2I3L3R5 266 aa24.47■■□□□ 1.51
NKX2-2-201ENST00000377142 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
NKX2-2-201ENST00000377142 DCAF11Q8TEB1 546 aa24.47■■□□□ 1.51
NKX2-2-201ENST00000377142 MAP3K4Q9Y6R4 1608 aa24.47■■□□□ 1.51
NKX2-2-201ENST00000377142 MLH3Q9UHC1 1453 aa24.46■■□□□ 1.51
NKX2-2-201ENST00000377142 TRPM1Q7Z4N2 1603 aa24.46■■□□□ 1.51
NKX2-2-201ENST00000377142 A2MP01023 1474 aa24.45■■□□□ 1.51
NKX2-2-201ENST00000377142 PRAG1Q86YV5 1406 aa24.44■■□□□ 1.5
NKX2-2-201ENST00000377142 RNF17Q9BXT8 1623 aaKnown RBP24.44■■□□□ 1.5
NKX2-2-201ENST00000377142 GLI2P10070 1586 aa24.44■■□□□ 1.5
NKX2-2-201ENST00000377142 CEP152O94986 1710 aa24.43■■□□□ 1.5
NKX2-2-201ENST00000377142 PTPRTO14522 1441 aa24.42■■□□□ 1.5
NKX2-2-201ENST00000377142 KDM2AQ9Y2K7 1162 aa24.42■■□□□ 1.5
NKX2-2-201ENST00000377142 BCORL1Q5H9F3 1711 aa24.41■■□□□ 1.5
NKX2-2-201ENST00000377142 C11orf95C9JLR9 678 aaPredicted RBP24.41■■□□□ 1.5
NKX2-2-201ENST00000377142 KIF3BO15066 747 aa24.41■■□□□ 1.5
NKX2-2-201ENST00000377142 LAMC1P11047 1609 aa24.4■■□□□ 1.5
NKX2-2-201ENST00000377142 KIF7Q2M1P5 1343 aa24.4■■□□□ 1.5
NKX2-2-201ENST00000377142 CARD11Q9BXL7 1154 aa24.39■■□□□ 1.49
NKX2-2-201ENST00000377142 EFCAB6Q5THR3 1501 aa24.38■■□□□ 1.49
NKX2-2-201ENST00000377142 LMTK2Q8IWU2 1503 aa24.38■■□□□ 1.49
NKX2-2-201ENST00000377142 ABCA6Q8N139 1617 aa24.38■■□□□ 1.49
NKX2-2-201ENST00000377142 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
NKX2-2-201ENST00000377142 CLTCL1P53675 1640 aa24.37■■□□□ 1.49
NKX2-2-201ENST00000377142 ROCK2O75116 1388 aaKnown RBP24.37■■□□□ 1.49
NKX2-2-201ENST00000377142 FRMPD1Q5SYB0 1578 aa24.37■■□□□ 1.49
NKX2-2-201ENST00000377142 ARID4BQ4LE39 1312 aaPredicted RBP24.37■■□□□ 1.49
NKX2-2-201ENST00000377142 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
NKX2-2-201ENST00000377142 RGL3Q3MIN7 710 aa24.35■■□□□ 1.49
NKX2-2-201ENST00000377142 GTF3C3Q9Y5Q9 886 aa24.34■■□□□ 1.49
NKX2-2-201ENST00000377142 NEURL4Q96JN8 1562 aa24.34■■□□□ 1.49
NKX2-2-201ENST00000377142 GPRASP1Q5JY77 1395 aa24.33■■□□□ 1.49
NKX2-2-201ENST00000377142 PPRC1Q5VV67 1664 aaKnown RBP24.33■■□□□ 1.48
NKX2-2-201ENST00000377142 DIP2BQ9P265 1576 aa24.31■■□□□ 1.48
NKX2-2-201ENST00000377142 DIP2CQ9Y2E4 1556 aa24.29■■□□□ 1.48
NKX2-2-201ENST00000377142 MADDQ8WXG6 1647 aa24.28■■□□□ 1.48
NKX2-2-201ENST00000377142 STAC3Q96MF2 364 aa24.26■■□□□ 1.47
NKX2-2-201ENST00000377142 KIF1BO60333 1816 aa24.25■■□□□ 1.47
NKX2-2-201ENST00000377142 ST20-MTHFSA0A0A6YYL1 179 aa24.22■■□□□ 1.47
NKX2-2-201ENST00000377142 RAPGEF3O95398 923 aa24.22■■□□□ 1.47
NKX2-2-201ENST00000377142 ZMYM4Q5VZL5 1548 aa24.21■■□□□ 1.47
NKX2-2-201ENST00000377142 ABCC3O15438 1527 aa24.2■■□□□ 1.46
NKX2-2-201ENST00000377142 PRKRIP1Q9H875 184 aaPredicted RBP24.19■■□□□ 1.46
NKX2-2-201ENST00000377142 NBPF1Q3BBV0 1214 aa24.19■■□□□ 1.46
NKX2-2-201ENST00000377142 CAMSAP1Q5T5Y3 1602 aa24.18■■□□□ 1.46
NKX2-2-201ENST00000377142 ZC3H13Q5T200 1668 aaKnown RBP24.18■■□□□ 1.46
NKX2-2-201ENST00000377142 KIAA1210Q9ULL0 1709 aa24.18■■□□□ 1.46
NKX2-2-201ENST00000377142 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
NKX2-2-201ENST00000377142 UGGT1Q9NYU2 1555 aa24.17■■□□□ 1.46
NKX2-2-201ENST00000377142 IQGAP1P46940 1657 aa24.16■■□□□ 1.46
NKX2-2-201ENST00000377142 FAM69CQ0P6D2 419 aa24.16■■□□□ 1.46
NKX2-2-201ENST00000377142 NPATQ14207 1427 aa24.16■■□□□ 1.46
NKX2-2-201ENST00000377142 MYOM2P54296 1465 aa24.16■■□□□ 1.46
NKX2-2-201ENST00000377142 MROH2AA6NES4 1674 aa24.15■■□□□ 1.46
NKX2-2-201ENST00000377142 POLR3GLQ9BT43 218 aa24.14■■□□□ 1.45
NKX2-2-201ENST00000377142 ADGRB3O60242 1522 aa24.13■■□□□ 1.45
NKX2-2-201ENST00000377142 TSPOAP1O95153 1857 aa24.13■■□□□ 1.45
NKX2-2-201ENST00000377142 GGT6Q6P531 493 aa24.13■■□□□ 1.45
NKX2-2-201ENST00000377142 COL17A1Q9UMD9 1497 aaPredicted RBP24.13■■□□□ 1.45
NKX2-2-201ENST00000377142 YEATS2Q9ULM3 1422 aa24.12■■□□□ 1.45
NKX2-2-201ENST00000377142 WASHC2CQ9Y4E1 1318 aa24.09■■□□□ 1.45
NKX2-2-201ENST00000377142 SCAF11Q99590 1463 aaKnown RBP24.06■■□□□ 1.44
NKX2-2-201ENST00000377142 REREQ9P2R6 1566 aa24.06■■□□□ 1.44
NKX2-2-201ENST00000377142 ARHGAP31Q2M1Z3 1444 aa24.06■■□□□ 1.44
NKX2-2-201ENST00000377142 SIGLEC1Q9BZZ2 1709 aa24.05■■□□□ 1.44
NKX2-2-201ENST00000377142 TESK2Q96S53 571 aa24.05■■□□□ 1.44
NKX2-2-201ENST00000377142 KIF13AQ9H1H9 1805 aa24.05■■□□□ 1.44
NKX2-2-201ENST00000377142 NOS1P29475 1434 aa24.05■■□□□ 1.44
NKX2-2-201ENST00000377142 NRXN1Q9ULB1 1477 aa24.04■■□□□ 1.44
NKX2-2-201ENST00000377142 CFAP65Q6ZU64 1925 aaKnown RBP24.04■■□□□ 1.44
NKX2-2-201ENST00000377142 PIK3C2BO00750 1634 aa24.04■■□□□ 1.44
NKX2-2-201ENST00000377142 PPLO60437 1756 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms